FFCP PHASE1:Hg19::chr15:26874251..26874262,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2562|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4083|TSSclassifier=S|UniProt=B7Z2W1,P28472|association_with_transcript=-14bp_to_ENST00000400188,NM_001191321_5end|description=CAGE_peak_7_at_GABRB3_5end|id=chr15:26874251..26874262,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002591;9.72e-14;1!CL:0002379;9.72e-14;1|ontology_enrichment_celltype_v019_2=CL:0002379,1.10e-13,1;CL:0002591,1.61e-13,1|ontology_enrichment_development_v019=UBERON:0000358;3.50e-14;1!UBERON:0001041;5.84e-07;30|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3620;9.72e-14;1!DOID:3565;9.72e-14;1!DOID:1324;3.47e-08;15!DOID:0050615;1.05e-07;16!DOID:3910;1.64e-07;2|ontology_enrichment_disease_v019_2=DOID:3620,1.10e-13,1;DOID:3565,1.10e-13,1;DOID:1324,3.07e-08,15;DOID:0050615,9.36e-08,16;DOID:3910,1.20e-07,2;DOID:305,9.85e-07,106|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0004903;1.64e-07;2!UBERON:0000078;1.64e-07;2!UBERON:0002012;1.64e-07;2!UBERON:0008886;1.64e-07;2!UBERON:0002173;1.64e-07;2!UBERON:0002186;1.64e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.20e-07,2;UBERON:0002173,1.20e-07,2;UBERON:0002186,1.20e-07,2;UBERON:0004807,1.88e-07,28;UBERON:0000078,2.12e-07,2;UBERON:0007497,2.12e-07,2;UBERON:0003643,2.12e-07,2;UBERON:0003504,2.12e-07,2;UBERON:0003469,2.12e-07,2;UBERON:0003496,2.12e-07,2;UBERON:0002012,2.12e-07,2;UBERON:0008886,2.12e-07,2;UBERON:0007303,2.12e-07,2;UBERON:0002061,2.12e-07,2;UBERON:0005432,2.12e-07,2;UBERON:0004363,2.12e-07,2|phase1_expression=0.726713517082227,0.428201047781966,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.196468613246569,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.397227542439656,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0.298897361103602,0.117434498643765,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0.358779271377724,0,0.423863802319124,0,0,0,0,0.168776332241266,0.487185025805993,0,0.184099797284599,0.161646056818812,0.710019185033229,0.10075209822764,0,0,0.272746120590835,0,0,0,0,0.10366105501537,0,0,1.56449532329816,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0.207328115540772,0,0,0.063497894292169,0,0,1.71072446022705,0.205654985406647,0.300343057843917,0,0,0,0,0.129271715757778,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0.199945982364114,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,0,0,0,0.234282829985426,0,0,0,0,0,0.347534457872331,0,0,0,0,0,0,1.66435439510497,0,0.496215615637554,0.153461973288062,0,0.512556597022804,0,0,0,0.308419387605311,0,0,0,0,0,0,0.644566922551274,0.114814448164607,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,0.165284915360978,0,0.382838137483752,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,1.13008116620243,0,0,0,0.578775534266688,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,1.05553817648832,0.329294892959902,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68426486367398,0,0.36408156524854,0,0,0.23874448473769,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0.622079175323615,0,1.61119057208048,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.227586896570999,1.77977555204936,0.709163045303809,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0.664653872707185,0.330991955875499,0.313932918407225,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0.0969890164884194,0,0,0,0.19871461170299,0.126621591911757,0.586654148204409,0.721429382263803,0.426905989478705,0.999048047910651,1.87317542300338,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.335917362433631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,1.30634944043764,0,0,0,0,0.439656701034247,0,0,0,2.05304205461195,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0,0,0,0.124192805882767,0,0,0,0,1.41159491818903,0,0.579684114443301,0.298509605773748,0.467426619694449,0,0,0,0,0,0.151230923763239,0,0,0.1592967671637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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2562 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4083 | |||
|TSSclassifier=S | |||
|UniProt=B7Z2W1,P28472 | |||
|association_with_transcript=-14bp_to_ENST00000400188,NM_001191321_5end | |||
|description=CAGE_peak_7_at_GABRB3_5end | |||
|id=chr15:26874251..26874262,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002591;9.72e-14;1!CL:0002379;9.72e-14;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,1.10e-13,1;CL:0002591,1.61e-13,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.50e-14;1!UBERON:0001041;5.84e-07;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;9.72e-14;1!DOID:3565;9.72e-14;1!DOID:1324;3.47e-08;15!DOID:0050615;1.05e-07;16!DOID:3910;1.64e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,1.10e-13,1;DOID:3565,1.10e-13,1;DOID:1324,3.07e-08,15;DOID:0050615,9.36e-08,16;DOID:3910,1.20e-07,2;DOID:305,9.85e-07,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.64e-07;2!UBERON:0000078;1.64e-07;2!UBERON:0002012;1.64e-07;2!UBERON:0008886;1.64e-07;2!UBERON:0002173;1.64e-07;2!UBERON:0002186;1.64e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.20e-07,2;UBERON:0002173,1.20e-07,2;UBERON:0002186,1.20e-07,2;UBERON:0004807,1.88e-07,28;UBERON:0000078,2.12e-07,2;UBERON:0007497,2.12e-07,2;UBERON:0003643,2.12e-07,2;UBERON:0003504,2.12e-07,2;UBERON:0003469,2.12e-07,2;UBERON:0003496,2.12e-07,2;UBERON:0002012,2.12e-07,2;UBERON:0008886,2.12e-07,2;UBERON:0007303,2.12e-07,2;UBERON:0002061,2.12e-07,2;UBERON:0005432,2.12e-07,2;UBERON:0004363,2.12e-07,2 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.196468613246569,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.397227542439656,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0.298897361103602,0.117434498643765,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0.358779271377724,0,0.423863802319124,0,0,0,0,0.168776332241266,0.487185025805993,0,0.184099797284599,0.161646056818812,0.710019185033229,0.10075209822764,0,0,0.272746120590835,0,0,0,0,0.10366105501537,0,0,1.56449532329816,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0.207328115540772,0,0,0.063497894292169,0,0,1.71072446022705,0.205654985406647,0.300343057843917,0,0,0,0,0.129271715757778,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0.199945982364114,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,0,0,0,0.234282829985426,0,0,0,0,0,0.347534457872331,0,0,0,0,0,0,1.66435439510497,0,0.496215615637554,0.153461973288062,0,0.512556597022804,0,0,0,0.308419387605311,0,0,0,0,0,0,0.644566922551274,0.114814448164607,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,0.165284915360978,0,0.382838137483752,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,1.13008116620243,0,0,0,0.578775534266688,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,1.05553817648832,0.329294892959902,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68426486367398,0,0.36408156524854,0,0,0.23874448473769,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0.622079175323615,0,1.61119057208048,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.227586896570999,1.77977555204936,0.709163045303809,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0.664653872707185,0.330991955875499,0.313932918407225,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0.0969890164884194,0,0,0,0.19871461170299,0.126621591911757,0.586654148204409,0.721429382263803,0.426905989478705,0.999048047910651,1.87317542300338,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.335917362433631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,1.30634944043764,0,0,0,0,0.439656701034247,0,0,0,2.05304205461195,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0,0,0,0.124192805882767,0,0,0,0,1.41159491818903,0,0.579684114443301,0.298509605773748,0.467426619694449,0,0,0,0,0,0.151230923763239,0,0,0.159296767163702,0.449803112163605,0.155262956876259,0,0.265841714557995,0,0.150257608997218,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0.431299245586727,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0.0691572524642179,0,0,0,1.1796972334774,0,0,0,0,0,0.150420656698515,0.20170506870352,0,0,0.818859587550484,0,0,0,0,0.0634158101939068,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0,0,0,0,0,0,0,1.00108261702862,0.313972371402056,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0.365753774946808,0,0,0,0,0,0,0.594600453887843,0,0,0,0.0771741581079447,0,0,0.245148321753905,0.235676547101626,0.196308467114945,0,0,0,0,0,0,0,0,2.96893056749923,0,0,0,0,0.0679914901909147,0,0,0,0,0.432626562123789,0,0,0.760191006068622,0.509944148709909,0,0,0,0.227336094654718,0,0,0,0.213233981900981,0.23806443146374,0,0.0620747142958579,0.672791175483681,0.381882949668989,0,0,0,0.134704106029175,0.932388670104793,0,0,0,0,0.538951212639521,2.34640942403454,0,0,0,0,0 | |||
|short_description=p7@GABRB3 | |||
}} |
Revision as of 06:27, 11 September 2013
Short description: | p7@GABRB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_GABRB3_5end |
Coexpression cluster: | NA |
Association with transcript: | -14bp_to_ENST00000400188, NM_001191321_5end |
EntrezGene: | GABRB3 |
HGNC: | 4083 |
UniProt: | B7Z2W1P28472 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 1.10e-13 | 1 |
smooth muscle cell of the pulmonary artery | 1.61e-13 | 1 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.20e-07 | 2 |
alveolar duct | 1.20e-07 | 2 |
bronchiole | 1.20e-07 | 2 |
respiratory system epithelium | 1.88e-07 | 28 |
mixed ectoderm/mesoderm/endoderm-derived structure | 2.12e-07 | 2 |
developing epithelial placode | 2.12e-07 | 2 |
respiratory system arterial blood vessel | 2.12e-07 | 2 |
respiratory system blood vessel | 2.12e-07 | 2 |
respiratory system artery | 2.12e-07 | 2 |
head blood vessel | 2.12e-07 | 2 |
pulmonary artery | 2.12e-07 | 2 |
pulmonary vascular system | 2.12e-07 | 2 |
pharyngeal vasculature | 2.12e-07 | 2 |
truncus arteriosus | 2.12e-07 | 2 |
aortic sac | 2.12e-07 | 2 |
pharyngeal arch artery | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 1.10e-13 | 1 |
meningioma | 1.10e-13 | 1 |
lung cancer | 3.07e-08 | 15 |
respiratory system cancer | 9.36e-08 | 16 |
lung adenocarcinoma | 1.20e-07 | 2 |
carcinoma | 9.85e-07 | 106 |
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