FFCP PHASE1:Hg19::chr15:48985825..48985828,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:48985825..48985828,-|id=chr15:48985825..48985828,-|ontology_enrichment_celltype=CL:0000057!5.05e-20!75;CL:0000055!4.89e-16!180;CL:0002334!6.18e-15!12;CL:0002620!7.76e-13!23;CL:0000048!5.47e-11!430;CL:0000723!1.29e-10!436;CL:0000034!3.88e-10!444;CL:0002580!1.76e-08!3;CL:0002371!6.22e-08!591;CL:0000134!6.46e-08!358;CL:0002320!1.60e-07!365;CL:0000144!3.97e-07!625|ontology_enrichment_celltype_v019=CL:0000511;2.97e-19;1!CL:0002625;2.97e-19;1!CL:0000216;2.97e-19;1!CL:0002537;1.05e-15;5!CL:0000349;1.19e-15;19!CL:0000515;2.05e-07;3!CL:0002541;2.71e-07;3!CL:0002577;2.71e-07;3|ontology_enrichment_celltype_v019_2=CL:0000511,3.25e-19,1;CL:0002625,3.25e-19,1;CL:0000216,3.25e-19,1;CL:0002537,1.05e-15,5;CL:0000349,1.19e-15,19;CL:0002577,2.47e-07,3;CL:0002541,2.97e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004872!5.67e-10!84;UBERON:0002199!1.00e-08!45;UBERON:0002416!1.00e-08!45;UBERON:0005631!1.35e-08!14;UBERON:0000158!1.35e-08!14;UBERON:0001637!1.72e-07!42;UBERON:0003509!1.72e-07!42;UBERON:0004572!1.72e-07!42;UBERON:0002097!1.83e-07!40;UBERON:0004573!2.34e-07!33;UBERON:0004571!2.34e-07!33;UBERON:0000478!2.90e-07!24;UBERON:0002384!5.46e-07!375;UBERON:0001981!5.75e-07!60;UBERON:0007500!5.75e-07!60;UBERON:0004537!5.75e-07!60;UBERON:0006965!5.75e-07!60|ontology_enrichment_uberon_v019=UBERON:0001136;2.97e-19;1!UBERON:0001343;2.97e-19;1!UBERON:0004910;2.97e-19;1!UBERON:0004813;2.97e-19;1!UBERON:0005631;4.59e-17;10!UBERON:0000158;4.59e-17;10!UBERON:0000478;1.81e-12;24!UBERON:0000305;1.68e-11;7!UBERON:0004909;2.60e-10;2!UBERON:0003124;2.71e-07;3!UBERON:0000920;2.71e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0004871,3.92e-21,8;UBERON:0005631,4.37e-21,14;UBERON:0000158,4.37e-21,14;UBERON:0001136,3.25e-19,1;UBERON:0001343,3.25e-19,1;UBERON:0004910,3.25e-19,1;UBERON:0005154,3.25e-19,1;UBERON:0005295,3.25e-19,1;UBERON:0004813,3.25e-19,1;UBERON:0005297,3.25e-19,1;UBERON:0005294,3.25e-19,1;UBERON:0010141,3.25e-19,1;UBERON:0005891,3.25e-19,1;UBERON:0000478,1.81e-12,24;UBERON:0000305,1.68e-11,7;UBERON:0003124,3.14e-11,7;UBERON:0004909,2.72e-10,2;UBERON:0000920,2.97e-07,3;UBERON:0004923,6.01e-07,66|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,1.85372853138506,0.286836620748814,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877955241761676,0,0.150238058906597,0,0.538168907066586,0.213557388818567,0,0,0.103052529238439,0.515281080091258,0.18611685633159,0.843881661206331,0.0974370051611986,0.504867548488229,0.0920498986422993,0,1.42003837006646,0.705264687593482,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0.671928512795438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,2.17171960001369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0.303127571446259,1.66435439510497,0,0.744323423456331,0.460385919864187,0.280660094433074,0.128139149255701,0,0.321707842287215,0,0.154209693802656,0.710246901252508,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88887408098384,0,0,0,0,0,0.572499546967965,0,0,0,0,0,0,0.78494864019923,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0.551365343546124,0.66343897524122,0,0,0,0.202910376962704,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81991175580304,0,3.37876772309155,0,0,0,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,1.5950057986596,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,1.63599316893057,0,0,0,0,0.457680136793847,0,0.15543720058278,0.147855149989634,0,0,0.155262956876259,0,0.265841714557995,0.521745061811734,0,0.761610424337591,0.406870733204662,0,0,0.464033759878494,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr15:48985825..48985828,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:48985825..48985828,- | |||
|id=chr15:48985825..48985828,- | |||
|ontology_enrichment_celltype=CL:0000057!5.05e-20!75;CL:0000055!4.89e-16!180;CL:0002334!6.18e-15!12;CL:0002620!7.76e-13!23;CL:0000048!5.47e-11!430;CL:0000723!1.29e-10!436;CL:0000034!3.88e-10!444;CL:0002580!1.76e-08!3;CL:0002371!6.22e-08!591;CL:0000134!6.46e-08!358;CL:0002320!1.60e-07!365;CL:0000144!3.97e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000511;2.97e-19;1!CL:0002625;2.97e-19;1!CL:0000216;2.97e-19;1!CL:0002537;1.05e-15;5!CL:0000349;1.19e-15;19!CL:0000515;2.05e-07;3!CL:0002541;2.71e-07;3!CL:0002577;2.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,3.25e-19,1;CL:0002625,3.25e-19,1;CL:0000216,3.25e-19,1;CL:0002537,1.05e-15,5;CL:0000349,1.19e-15,19;CL:0002577,2.47e-07,3;CL:0002541,2.97e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!5.67e-10!84;UBERON:0002199!1.00e-08!45;UBERON:0002416!1.00e-08!45;UBERON:0005631!1.35e-08!14;UBERON:0000158!1.35e-08!14;UBERON:0001637!1.72e-07!42;UBERON:0003509!1.72e-07!42;UBERON:0004572!1.72e-07!42;UBERON:0002097!1.83e-07!40;UBERON:0004573!2.34e-07!33;UBERON:0004571!2.34e-07!33;UBERON:0000478!2.90e-07!24;UBERON:0002384!5.46e-07!375;UBERON:0001981!5.75e-07!60;UBERON:0007500!5.75e-07!60;UBERON:0004537!5.75e-07!60;UBERON:0006965!5.75e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.97e-19;1!UBERON:0001343;2.97e-19;1!UBERON:0004910;2.97e-19;1!UBERON:0004813;2.97e-19;1!UBERON:0005631;4.59e-17;10!UBERON:0000158;4.59e-17;10!UBERON:0000478;1.81e-12;24!UBERON:0000305;1.68e-11;7!UBERON:0004909;2.60e-10;2!UBERON:0003124;2.71e-07;3!UBERON:0000920;2.71e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004871,3.92e-21,8;UBERON:0005631,4.37e-21,14;UBERON:0000158,4.37e-21,14;UBERON:0001136,3.25e-19,1;UBERON:0001343,3.25e-19,1;UBERON:0004910,3.25e-19,1;UBERON:0005154,3.25e-19,1;UBERON:0005295,3.25e-19,1;UBERON:0004813,3.25e-19,1;UBERON:0005297,3.25e-19,1;UBERON:0005294,3.25e-19,1;UBERON:0010141,3.25e-19,1;UBERON:0005891,3.25e-19,1;UBERON:0000478,1.81e-12,24;UBERON:0000305,1.68e-11,7;UBERON:0003124,3.14e-11,7;UBERON:0004909,2.72e-10,2;UBERON:0000920,2.97e-07,3;UBERON:0004923,6.01e-07,66 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,1.85372853138506,0.286836620748814,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877955241761676,0,0.150238058906597,0,0.538168907066586,0.213557388818567,0,0,0.103052529238439,0.515281080091258,0.18611685633159,0.843881661206331,0.0974370051611986,0.504867548488229,0.0920498986422993,0,1.42003837006646,0.705264687593482,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0.671928512795438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,2.17171960001369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0.303127571446259,1.66435439510497,0,0.744323423456331,0.460385919864187,0.280660094433074,0.128139149255701,0,0.321707842287215,0,0.154209693802656,0.710246901252508,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88887408098384,0,0,0,0,0,0.572499546967965,0,0,0,0,0,0,0.78494864019923,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0.551365343546124,0.66343897524122,0,0,0,0.202910376962704,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81991175580304,0,3.37876772309155,0,0,0,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,1.5950057986596,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,1.63599316893057,0,0,0,0,0.457680136793847,0,0.15543720058278,0.147855149989634,0,0,0.155262956876259,0,0.265841714557995,0.521745061811734,0,0.761610424337591,0.406870733204662,0,0,0.464033759878494,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:48985825..48985828,- | |||
}} |
Revision as of 07:16, 11 September 2013
Short description: | p@chr15:48985825..48985828, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:48985825..48985828, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 3.25e-19 | 1 |
seminiferous tubule epithelial cell | 3.25e-19 | 1 |
Sertoli cell | 3.25e-19 | 1 |
amnion mesenchymal stem cell | 1.05e-15 | 5 |
extraembryonic cell | 1.19e-15 | 19 |
placental epithelial cell | 2.47e-07 | 3 |
chorionic membrane mesenchymal stem cell | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
somatic layer of lateral plate mesoderm | 3.92e-21 | 8 |
extraembryonic membrane | 4.37e-21 | 14 |
membranous layer | 4.37e-21 | 14 |
mesothelium | 3.25e-19 | 1 |
seminiferous tubule of testis | 3.25e-19 | 1 |
epithelium of male gonad | 3.25e-19 | 1 |
epithelial cord | 3.25e-19 | 1 |
sex cord | 3.25e-19 | 1 |
seminiferous tubule epithelium | 3.25e-19 | 1 |
testis sex cord | 3.25e-19 | 1 |
genital ridge | 3.25e-19 | 1 |
primitive sex cord of indifferent gonad | 3.25e-19 | 1 |
coelomic epithelium | 3.25e-19 | 1 |
extraembryonic structure | 1.81e-12 | 24 |
amnion | 1.68e-11 | 7 |
chorion | 3.14e-11 | 7 |
epithelium of gonad | 2.72e-10 | 2 |
egg chorion | 2.97e-07 | 3 |
organ component layer | 6.01e-07 | 66 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.