FFCP PHASE1:Hg19::chr15:75090972..75090998,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1445|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2444|TSSclassifier=S|UniProt=B4DMZ0|association_with_transcript=7bp_to_AK297694_5end|coexpression_cluster_id=C78|description=CAGE_peak_10_at_CSK_5end|id=chr15:75090972..75090998,+|ontology_enrichment_celltype=CL:0000945!9.27e-08!24;CL:0000826!9.27e-08!24;CL:0000542!1.28e-07!53;CL:0000051!1.28e-07!53;CL:0000838!5.73e-07!52;CL:0002087!5.97e-07!119;CL:0000037!8.39e-07!172;CL:0000566!8.39e-07!172|ontology_enrichment_celltype_v019=CL:0000945;2.53e-15;24!CL:0000182;1.17e-08;12|ontology_enrichment_celltype_v019_2=CL:0000945,1.77e-15,24;CL:0000826,1.77e-15,24;CL:0000542,4.33e-09,53;CL:0000051,4.33e-09,53;CL:0000182,1.17e-08,12;CL:0000838,6.34e-07,52|ontology_enrichment_development_v019=UBERON:0006215;4.13e-15;3!UBERON:0008801;9.60e-12;1!UBERON:0010227;9.60e-12;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:12603;9.60e-12;1|ontology_enrichment_disease_v019_2=DOID:12603,8.64e-12,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000029;9.60e-12;1!UBERON:0002079;9.60e-12;1!UBERON:0001831;9.60e-12;1!UBERON:0001567;9.60e-12;1!UBERON:0002107;2.57e-09;19!UBERON:0006925;2.57e-09;19!UBERON:0002365;7.92e-09;31!UBERON:0002330;7.92e-09;31!UBERON:0002037;5.26e-08;6!UBERON:0002423;4.09e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0000029,7.76e-12,1;UBERON:0002079,9.61e-12,1;UBERON:0001831,1.63e-11,1;UBERON:0001567,1.63e-11,1;UBERON:0008801,1.63e-11,1;UBERON:0002107,2.55e-09,19;UBERON:0006925,2.55e-09,19;UBERON:0008836,2.55e-09,19;UBERON:0002365,1.66e-08,31;UBERON:0002330,1.66e-08,31;UBERON:0008835,4.53e-08,22;UBERON:0003894,4.53e-08,22;UBERON:0002037,5.74e-08,6;UBERON:0006215,5.74e-08,6;UBERON:0009854,1.00e-07,23;UBERON:0007499,4.06e-07,25;UBERON:0009497,4.06e-07,25;UBERON:0000015,4.06e-07,25;UBERON:0002423,4.06e-07,25;UBERON:0006235,4.06e-07,25;UBERON:0004161,4.06e-07,25;UBERON:0009856,7.54e-07,26|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,1.68109492645493,1.9704141467987,1.57421562627358,0,0,0,0,0,0.369754010166788,0.0774672005803016,0,0.587200878669695,0,0,0,0,0,0,0.145398238779565,0.377875943688809,0.242584061187816,0.464858073811369,0,0,0,0.256160706529101,0.47296445977717,0,0,0,0.564727018627814,0,0,0,0,0,0,0.598390972864896,0,0,0,0,0.502497330513487,0.521482918420201,0,0,0,0,0,0.850417199860174,0,0,0.150176892841506,0,0,1.39241674039363,0.365328307529268,1.75996244461323,0,0,0.853460445133014,0,1.14950487990897,0.661044872784862,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0.167186495390678,0,0,0,0.334231370655521,0.294605907474837,0.443067789167242,0,0.512365278902701,0.390178042679635,0.493313713811028,0,0,0,0.535081656179426,0,0,0,0.68725489096526,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,5.07020139287323,3.9313088667105,3.54473944008842,0,0,0.171567810298526,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0.433099343283221,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0,0,0,0.383382679165211,0,0.088048434013226,0.207328115540772,0,0,0.126995788584338,0,0,0,0.205654985406647,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0.254094624222463,0,0,0,0,0.749007023947182,0,1.24324654030811,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0.200506470303285,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0.307007349452259,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0,0,0,0.2023155617111,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0.438450885253763,0,0,0,0,0.281695602532241,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.376575203107117,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0,0,0,0,0,0,0,1.48642540100575,0,0.0711418433484141,0.478278818186467,0.199579371432817,0,0.423347165447766,0,0.280797178113459,0.228234679033192,0.156679895773023,0,0,0.321176150207399,0.201799707191048,0,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0.861593638227486,0,0,0.358042349351218,1.02314474045374,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,4.5774520895125,1.3269511191747,0.886642856860642,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1445 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2444 | |||
|TSSclassifier=S | |||
|UniProt=B4DMZ0 | |||
|association_with_transcript=7bp_to_AK297694_5end | |||
|coexpression_cluster_id=C78 | |||
|description=CAGE_peak_10_at_CSK_5end | |||
|id=chr15:75090972..75090998,+ | |||
|ontology_enrichment_celltype=CL:0000945!9.27e-08!24;CL:0000826!9.27e-08!24;CL:0000542!1.28e-07!53;CL:0000051!1.28e-07!53;CL:0000838!5.73e-07!52;CL:0002087!5.97e-07!119;CL:0000037!8.39e-07!172;CL:0000566!8.39e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.53e-15;24!CL:0000182;1.17e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.77e-15,24;CL:0000826,1.77e-15,24;CL:0000542,4.33e-09,53;CL:0000051,4.33e-09,53;CL:0000182,1.17e-08,12;CL:0000838,6.34e-07,52 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.13e-15;3!UBERON:0008801;9.60e-12;1!UBERON:0010227;9.60e-12;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:12603;9.60e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,8.64e-12,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;9.60e-12;1!UBERON:0002079;9.60e-12;1!UBERON:0001831;9.60e-12;1!UBERON:0001567;9.60e-12;1!UBERON:0002107;2.57e-09;19!UBERON:0006925;2.57e-09;19!UBERON:0002365;7.92e-09;31!UBERON:0002330;7.92e-09;31!UBERON:0002037;5.26e-08;6!UBERON:0002423;4.09e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,7.76e-12,1;UBERON:0002079,9.61e-12,1;UBERON:0001831,1.63e-11,1;UBERON:0001567,1.63e-11,1;UBERON:0008801,1.63e-11,1;UBERON:0002107,2.55e-09,19;UBERON:0006925,2.55e-09,19;UBERON:0008836,2.55e-09,19;UBERON:0002365,1.66e-08,31;UBERON:0002330,1.66e-08,31;UBERON:0008835,4.53e-08,22;UBERON:0003894,4.53e-08,22;UBERON:0002037,5.74e-08,6;UBERON:0006215,5.74e-08,6;UBERON:0009854,1.00e-07,23;UBERON:0007499,4.06e-07,25;UBERON:0009497,4.06e-07,25;UBERON:0000015,4.06e-07,25;UBERON:0002423,4.06e-07,25;UBERON:0006235,4.06e-07,25;UBERON:0004161,4.06e-07,25;UBERON:0009856,7.54e-07,26 | |||
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|short_description=p10@CSK | |||
}} |
Revision as of 08:15, 11 September 2013
Short description: | p10@CSK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_CSK_5end |
Coexpression cluster: | C78_lymphoma_plasma_tonsil_appendix_lymph_seminal_trachea |
Association with transcript: | 7bp_to_AK297694_5end |
EntrezGene: | CSK |
HGNC: | 2444 |
UniProt: | B4DMZ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.77e-15 | 24 |
pro-B cell | 1.77e-15 | 24 |
lymphocyte | 4.33e-09 | 53 |
common lymphoid progenitor | 4.33e-09 | 53 |
hepatocyte | 1.17e-08 | 12 |
lymphoid lineage restricted progenitor cell | 6.34e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
lymph node | 7.76e-12 | 1 |
left cardiac atrium | 9.61e-12 | 1 |
parotid gland | 1.63e-11 | 1 |
cheek | 1.63e-11 | 1 |
parotid gland primordium | 1.63e-11 | 1 |
liver | 2.55e-09 | 19 |
digestive gland | 2.55e-09 | 19 |
liver bud | 2.55e-09 | 19 |
exocrine gland | 1.66e-08 | 31 |
exocrine system | 1.66e-08 | 31 |
hepatic diverticulum | 4.53e-08 | 22 |
liver primordium | 4.53e-08 | 22 |
cerebellum | 5.74e-08 | 6 |
rhombic lip | 5.74e-08 | 6 |
digestive tract diverticulum | 1.00e-07 | 23 |
epithelial sac | 4.06e-07 | 25 |
epithelium of foregut-midgut junction | 4.06e-07 | 25 |
anatomical boundary | 4.06e-07 | 25 |
hepatobiliary system | 4.06e-07 | 25 |
foregut-midgut junction | 4.06e-07 | 25 |
septum transversum | 4.06e-07 | 25 |
sac | 7.54e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 8.64e-12 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.