FFCP PHASE1:Hg19::chr16:30015874..30015893,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C97|description=CAGE_peak_at_chr16:30015874..30015893,+|id=chr16:30015874..30015893,+|ontology_enrichment_celltype=CL:0000242!7.05e-11!2|ontology_enrichment_celltype_v019=CL:0002553;9.99e-30;1!CL:0000167;2.73e-29;1!CL:0000164;2.73e-29;1!CL:0000502;2.73e-29;1!CL:0000172;2.73e-29;1!CL:0000173;2.73e-29;1!CL:0000123;2.21e-15;2!CL:0000242;2.21e-15;2!CL:0000082;5.33e-07;19!CL:0000312;6.21e-07;5|ontology_enrichment_celltype_v019_2=CL:0002553,9.99e-30,1;CL:0000167,2.37e-29,1;CL:0000164,2.37e-29,1;CL:0000502,2.37e-29,1;CL:0000172,2.37e-29,1;CL:0000173,2.37e-29,1;CL:0002351,2.37e-29,1;CL:0000242,2.74e-15,2;CL:0000082,5.34e-07,19;CL:0000312,6.77e-07,5|ontology_enrichment_development_v019=CL:0002351;2.73e-29;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4430;2.73e-29;1!DOID:3119;4.95e-09;14!DOID:1324;1.27e-08;15!DOID:5409;1.70e-08;4!DOID:0050615;3.83e-08;16!DOID:4362;5.38e-07;5|ontology_enrichment_disease_v019_2=DOID:4430,2.37e-29,1;DOID:3119,4.75e-09,14;DOID:1324,1.27e-08,15;DOID:5409,1.70e-08,4;DOID:0050615,3.83e-08,16;DOID:0050687,2.48e-07,143;DOID:4362,5.38e-07,5|ontology_enrichment_uberon=UBERON:0001950!1.26e-09!20;UBERON:0002619!1.04e-08!22;UBERON:0001049!1.15e-08!57;UBERON:0005068!1.15e-08!57;UBERON:0006241!1.15e-08!57;UBERON:0007135!1.15e-08!57;UBERON:0000956!1.34e-07!25;UBERON:0000203!1.34e-07!25;UBERON:0001869!1.85e-07!32;UBERON:0000200!4.11e-07!6;UBERON:0001893!5.77e-07!34;UBERON:0002616!6.98e-07!59;UBERON:0002771!7.58e-07!3|ontology_enrichment_uberon_v019=UBERON:0004802;5.33e-07;19!UBERON:0000115;5.33e-07;19|ontology_enrichment_uberon_v019_2=UBERON:0004802,5.34e-07,19;UBERON:0000115,5.34e-07,19|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0.762760950878299,0,1.03423011972439,0.583209226766509,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0.936669811613763,1.01444720027578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,16.8119857139949,0,0,0,0,0.159633859057151,0,0,0.276629009856872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.271878931907327,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.88969961156001,0.198950775161368,0,0,0,21.8896123171677,0,0,1.41095188908457,0,1.17838273550813,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0|short_description=p@chr16:30015874..30015893,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C97 | |||
|description=CAGE_peak_at_chr16:30015874..30015893,+ | |||
|id=chr16:30015874..30015893,+ | |||
|ontology_enrichment_celltype=CL:0000242!7.05e-11!2 | |||
|ontology_enrichment_celltype_v019=CL:0002553;9.99e-30;1!CL:0000167;2.73e-29;1!CL:0000164;2.73e-29;1!CL:0000502;2.73e-29;1!CL:0000172;2.73e-29;1!CL:0000173;2.73e-29;1!CL:0000123;2.21e-15;2!CL:0000242;2.21e-15;2!CL:0000082;5.33e-07;19!CL:0000312;6.21e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,9.99e-30,1;CL:0000167,2.37e-29,1;CL:0000164,2.37e-29,1;CL:0000502,2.37e-29,1;CL:0000172,2.37e-29,1;CL:0000173,2.37e-29,1;CL:0002351,2.37e-29,1;CL:0000242,2.74e-15,2;CL:0000082,5.34e-07,19;CL:0000312,6.77e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002351;2.73e-29;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;2.73e-29;1!DOID:3119;4.95e-09;14!DOID:1324;1.27e-08;15!DOID:5409;1.70e-08;4!DOID:0050615;3.83e-08;16!DOID:4362;5.38e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,2.37e-29,1;DOID:3119,4.75e-09,14;DOID:1324,1.27e-08,15;DOID:5409,1.70e-08,4;DOID:0050615,3.83e-08,16;DOID:0050687,2.48e-07,143;DOID:4362,5.38e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001950!1.26e-09!20;UBERON:0002619!1.04e-08!22;UBERON:0001049!1.15e-08!57;UBERON:0005068!1.15e-08!57;UBERON:0006241!1.15e-08!57;UBERON:0007135!1.15e-08!57;UBERON:0000956!1.34e-07!25;UBERON:0000203!1.34e-07!25;UBERON:0001869!1.85e-07!32;UBERON:0000200!4.11e-07!6;UBERON:0001893!5.77e-07!34;UBERON:0002616!6.98e-07!59;UBERON:0002771!7.58e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004802;5.33e-07;19!UBERON:0000115;5.33e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,5.34e-07,19;UBERON:0000115,5.34e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0.762760950878299,0,1.03423011972439,0.583209226766509,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0.936669811613763,1.01444720027578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,16.8119857139949,0,0,0,0,0.159633859057151,0,0,0.276629009856872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.271878931907327,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.88969961156001,0.198950775161368,0,0,0,21.8896123171677,0,0,1.41095188908457,0,1.17838273550813,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr16:30015874..30015893,+ | |||
}} |
Revision as of 10:03, 11 September 2013
Short description: | p@chr16:30015874..30015893, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:30015874..30015893, + |
Coexpression cluster: | C97_small_smallcell_gastrointestinal_argyrophil_putamen_duodenum_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 9.99e-30 | 1 |
peptide hormone secreting cell | 2.37e-29 | 1 |
enteroendocrine cell | 2.37e-29 | 1 |
type D enteroendocrine cell | 2.37e-29 | 1 |
somatostatin secreting cell | 2.37e-29 | 1 |
pancreatic D cell | 2.37e-29 | 1 |
progenitor cell of endocrine pancreas | 2.37e-29 | 1 |
Merkel cell | 2.74e-15 | 2 |
epithelial cell of lung | 5.34e-07 | 19 |
keratinocyte | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 5.34e-07 | 19 |
lung epithelium | 5.34e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 2.37e-29 | 1 |
gastrointestinal system cancer | 4.75e-09 | 14 |
lung cancer | 1.27e-08 | 15 |
lung small cell carcinoma | 1.70e-08 | 4 |
respiratory system cancer | 3.83e-08 | 16 |
cell type cancer | 2.48e-07 | 143 |
cervical cancer | 5.38e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.