FFCP PHASE1:Hg19::chr17:19976626..19976659,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=92521|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30615|TSSclassifier=N|UniProt=|association_with_transcript=-250bp_to_uc010cqx.2_5end|coexpression_cluster_id=C61|description=CAGE_peak_14_at_SPECC1_5end|id=chr17:19976626..19976659,+|ontology_enrichment_celltype=CL:0000451!4.26e-17!10;CL:0000037!1.63e-16!172;CL:0000566!1.63e-16!172;CL:0000738!3.35e-16!140;CL:0000988!1.51e-15!182;CL:0002032!4.76e-14!165;CL:0000837!4.76e-14!165;CL:0000990!1.12e-13!8;CL:0000763!1.55e-11!112;CL:0000049!1.55e-11!112;CL:0002031!8.62e-10!124;CL:0000766!1.64e-08!76;CL:0002087!2.95e-08!119;CL:0000840!3.66e-08!5;CL:0001029!3.66e-08!5;CL:0000557!1.34e-07!71;CL:0000839!5.57e-07!70;CL:0000784!5.93e-07!3;CL:0000453!5.93e-07!5|ontology_enrichment_celltype_v019=CL:0000453;9.69e-37;5!CL:0000451;2.20e-29;10!CL:0000990;8.88e-21;8!CL:0000771;2.60e-11;2!CL:0000094;7.12e-11;8!CL:0000081;3.69e-08;11!CL:0000784;7.26e-08;3!CL:0000775;7.26e-08;3|ontology_enrichment_celltype_v019_2=CL:0000453,9.70e-37,5;CL:0000451,1.90e-29,10;CL:0000990,8.88e-21,8;CL:0000771,2.47e-11,2;CL:0000738,2.62e-11,136;CL:0000037,2.70e-11,168;CL:0000094,6.61e-11,8;CL:0000988,1.07e-10,177;CL:0002032,1.71e-09,161;CL:0000837,1.71e-09,161;CL:0000081,3.50e-08,11;CL:0000784,6.34e-08,3;CL:0000775,6.78e-08,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:630;6.31e-21;1!DOID:0050177;6.31e-21;1!DOID:0050427;6.31e-21;1|ontology_enrichment_disease_v019_2=DOID:630,7.72e-21,1;DOID:0050177,7.72e-21,1;DOID:0050427,7.72e-21,1|ontology_enrichment_uberon=UBERON:0002390!3.58e-12!102;UBERON:0003061!3.58e-12!102;UBERON:0002193!5.09e-11!112;UBERON:0007023!1.27e-10!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0.152826811495903,0,0.236132343941038,0,0,0.154816123316076,0,0,0,0.0774672005803016,0,0,0,0.401088894940283,0,0,0,0,0.290796477559129,0,0.242584061187816,0.232429036905685,0,0,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0.502497330513487,0.521482918420201,0.434377689410233,0,0,0,0.422510572623884,0,0.209658645508376,0,0,0,0,0.19891667719909,0.365328307529268,0,0.546138611262131,0,0,0,0,0,0,0,1.17447437874188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0.651083453856419,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.263504357079378,0.130979075497713,0,0,0.649094787309367,0.696518949197069,0.26591592103773,0.953962497221368,1.71598473234038,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0.492663237895943,0.352193736052904,0.829312462163088,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,1.49801404789436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0.426910231213777,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0,0.714695326373367,0.411362273086194,0,0,0.79312517629427,0,0,0,0,0,0,0,0.399158742865633,0,0,0,0,0.456469358066384,0,2.50634477090067,0.169291777801603,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33732061132974,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332423363800313,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0.123563938946503,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.276516872303462,11.1070376038451,4.25167489002762,16.0294086370727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.247871528518004,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0.135075169236789,0.781078098613847,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0.0679697329768317,0.263091094251396,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.214429632529969,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=92521 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30615 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-250bp_to_uc010cqx.2_5end | |||
|coexpression_cluster_id=C61 | |||
|description=CAGE_peak_14_at_SPECC1_5end | |||
|id=chr17:19976626..19976659,+ | |||
|ontology_enrichment_celltype=CL:0000451!4.26e-17!10;CL:0000037!1.63e-16!172;CL:0000566!1.63e-16!172;CL:0000738!3.35e-16!140;CL:0000988!1.51e-15!182;CL:0002032!4.76e-14!165;CL:0000837!4.76e-14!165;CL:0000990!1.12e-13!8;CL:0000763!1.55e-11!112;CL:0000049!1.55e-11!112;CL:0002031!8.62e-10!124;CL:0000766!1.64e-08!76;CL:0002087!2.95e-08!119;CL:0000840!3.66e-08!5;CL:0001029!3.66e-08!5;CL:0000557!1.34e-07!71;CL:0000839!5.57e-07!70;CL:0000784!5.93e-07!3;CL:0000453!5.93e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000453;9.69e-37;5!CL:0000451;2.20e-29;10!CL:0000990;8.88e-21;8!CL:0000771;2.60e-11;2!CL:0000094;7.12e-11;8!CL:0000081;3.69e-08;11!CL:0000784;7.26e-08;3!CL:0000775;7.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,9.70e-37,5;CL:0000451,1.90e-29,10;CL:0000990,8.88e-21,8;CL:0000771,2.47e-11,2;CL:0000738,2.62e-11,136;CL:0000037,2.70e-11,168;CL:0000094,6.61e-11,8;CL:0000988,1.07e-10,177;CL:0002032,1.71e-09,161;CL:0000837,1.71e-09,161;CL:0000081,3.50e-08,11;CL:0000784,6.34e-08,3;CL:0000775,6.78e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;6.31e-21;1!DOID:0050177;6.31e-21;1!DOID:0050427;6.31e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,7.72e-21,1;DOID:0050177,7.72e-21,1;DOID:0050427,7.72e-21,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.58e-12!102;UBERON:0003061!3.58e-12!102;UBERON:0002193!5.09e-11!112;UBERON:0007023!1.27e-10!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0.152826811495903,0,0.236132343941038,0,0,0.154816123316076,0,0,0,0.0774672005803016,0,0,0,0.401088894940283,0,0,0,0,0.290796477559129,0,0.242584061187816,0.232429036905685,0,0,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0.502497330513487,0.521482918420201,0.434377689410233,0,0,0,0.422510572623884,0,0.209658645508376,0,0,0,0,0.19891667719909,0.365328307529268,0,0.546138611262131,0,0,0,0,0,0,0,1.17447437874188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0.651083453856419,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.263504357079378,0.130979075497713,0,0,0.649094787309367,0.696518949197069,0.26591592103773,0.953962497221368,1.71598473234038,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0.492663237895943,0.352193736052904,0.829312462163088,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,1.49801404789436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0.426910231213777,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0,0.714695326373367,0.411362273086194,0,0,0.79312517629427,0,0,0,0,0,0,0,0.399158742865633,0,0,0,0,0.456469358066384,0,2.50634477090067,0.169291777801603,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33732061132974,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332423363800313,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0.123563938946503,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.276516872303462,11.1070376038451,4.25167489002762,16.0294086370727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.247871528518004,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0.135075169236789,0.781078098613847,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0.0679697329768317,0.263091094251396,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0.392616934229891,0,0.4226557275834,0,0.187967835959707,0.0644578879735772,0.0999411559249289,0,0,0,0,0.458729283404541,0,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.387533459016037,0.31037357147929,0,0,0.404234377916439,0,0,0.134704106029175,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0.402547587182052,1.28227396921293 | |||
|short_description=p14@SPECC1 | |||
}} |
Revision as of 12:34, 11 September 2013
Short description: | p14@SPECC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_SPECC1_5end |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | -250bp_to_uc010cqx.2_5end |
EntrezGene: | SPECC1 |
HGNC: | 30615 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 9.70e-37 | 5 |
dendritic cell | 1.90e-29 | 10 |
conventional dendritic cell | 8.88e-21 | 8 |
eosinophil | 2.47e-11 | 2 |
leukocyte | 2.62e-11 | 136 |
hematopoietic stem cell | 2.70e-11 | 168 |
granulocyte | 6.61e-11 | 8 |
hematopoietic cell | 1.07e-10 | 177 |
hematopoietic oligopotent progenitor cell | 1.71e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.71e-09 | 161 |
blood cell | 3.50e-08 | 11 |
plasmacytoid dendritic cell | 6.34e-08 | 3 |
neutrophil | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 7.72e-21 | 1 |
monogenic disease | 7.72e-21 | 1 |
xeroderma pigmentosum | 7.72e-21 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.