FFCP PHASE1:Hg19::chr17:36068453..36068464,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2402|description=CAGE_peak_at_chr17:36068453..36068464,+|id=chr17:36068453..36068464,+|ontology_enrichment_celltype=CL:0002178!1.39e-10!3;CL:0000313!3.31e-09!1;CL:0002563!1.05e-08!4;CL:0000223!4.71e-07!59|ontology_enrichment_celltype_v019=CL:0000313;1.88e-50;1!CL:0000159;4.90e-26;2!CL:0002253;8.10e-26;2!CL:0002563;1.21e-13;4|ontology_enrichment_celltype_v019_2=CL:0000313,2.42e-50,1;CL:0000159,5.56e-26,2;CL:0002253,7.14e-26,2;CL:0002563,1.13e-13,4|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:299!3.30e-18!25;DOID:4468!3.71e-16!2;DOID:3493!5.02e-16!2;DOID:305!1.35e-09!106;DOID:2152!3.31e-09!1;DOID:178!9.74e-09!1;DOID:326!9.74e-09!1;DOID:3978!9.74e-09!1;DOID:3394!9.74e-09!1;DOID:5844!9.74e-09!1|ontology_enrichment_disease_v019=DOID:2152;1.88e-50;1!DOID:3493;4.90e-26;2!DOID:299;1.05e-18;25|ontology_enrichment_disease_v019_2=DOID:2152,2.42e-50,1;DOID:3493,4.32e-26,2;DOID:299,1.02e-18,25|ontology_enrichment_uberon=UBERON:0003929!2.80e-12!54;UBERON:0009497!2.11e-10!25;UBERON:0000015!2.11e-10!25;UBERON:0002423!2.11e-10!25;UBERON:0006235!2.11e-10!25;UBERON:0004161!2.11e-10!25;UBERON:0004921!4.97e-10!129;UBERON:0004185!4.97e-10!129;UBERON:0005409!2.61e-09!35;UBERON:0004911!3.31e-09!1;UBERON:0001007!3.64e-09!155;UBERON:0001555!3.64e-09!155;UBERON:0007026!3.64e-09!155;UBERON:0005911!3.69e-09!82;UBERON:0001242!1.05e-08!4;UBERON:0001262!1.05e-08!4;UBERON:0004786!1.05e-08!4;UBERON:0004808!1.05e-08!4;UBERON:0001277!1.05e-08!4;UBERON:0006834!1.53e-08!1;UBERON:0008835!1.86e-08!22;UBERON:0003894!1.86e-08!22;UBERON:0004119!3.65e-08!169;UBERON:0000925!3.65e-08!169;UBERON:0006595!3.65e-08!169;UBERON:0009854!4.44e-08!23;UBERON:0001155!4.45e-08!9;UBERON:0007499!2.05e-07!25;UBERON:0003350!4.00e-07!5;UBERON:0009856!4.04e-07!26|ontology_enrichment_uberon_v019=UBERON:0004911;1.88e-50;1!UBERON:0004909;4.90e-26;2!UBERON:0001052;1.21e-13;4!UBERON:0001242;1.21e-13;4!UBERON:0001262;1.21e-13;4!UBERON:0004786;1.21e-13;4!UBERON:0004808;1.21e-13;4!UBERON:0001277;1.21e-13;4!UBERON:0004907;3.42e-11;5!UBERON:0001871;2.26e-08;6!UBERON:0000485;2.26e-08;7!UBERON:0003929;2.26e-08;7!UBERON:0003350;1.75e-07;8!UBERON:0001155;8.61e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0004911,2.42e-50,1;UBERON:0004909,5.56e-26,2;UBERON:0001052,1.13e-13,4;UBERON:0001242,1.13e-13,4;UBERON:0001262,1.13e-13,4;UBERON:0004786,1.13e-13,4;UBERON:0004808,1.13e-13,4;UBERON:0001277,1.13e-13,4;UBERON:0004907,3.26e-11,5;UBERON:0001871,2.35e-08,6;UBERON:0003350,1.69e-07,8;UBERON:0001155,8.37e-07,9;UBERON:0000485,8.37e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537063524026827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.816164040795739,1.27217764290547,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.630265458457789,0.412079291905832,0.471824806979294,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.3623618401139,0.098150233615243,4.99863492427305,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0|short_description=p@chr17:36068453..36068464,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2402 | |||
|description=CAGE_peak_at_chr17:36068453..36068464,+ | |||
|id=chr17:36068453..36068464,+ | |||
|ontology_enrichment_celltype=CL:0002178!1.39e-10!3;CL:0000313!3.31e-09!1;CL:0002563!1.05e-08!4;CL:0000223!4.71e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000313;1.88e-50;1!CL:0000159;4.90e-26;2!CL:0002253;8.10e-26;2!CL:0002563;1.21e-13;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,2.42e-50,1;CL:0000159,5.56e-26,2;CL:0002253,7.14e-26,2;CL:0002563,1.13e-13,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:299!3.30e-18!25;DOID:4468!3.71e-16!2;DOID:3493!5.02e-16!2;DOID:305!1.35e-09!106;DOID:2152!3.31e-09!1;DOID:178!9.74e-09!1;DOID:326!9.74e-09!1;DOID:3978!9.74e-09!1;DOID:3394!9.74e-09!1;DOID:5844!9.74e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:2152;1.88e-50;1!DOID:3493;4.90e-26;2!DOID:299;1.05e-18;25 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,2.42e-50,1;DOID:3493,4.32e-26,2;DOID:299,1.02e-18,25 | |||
|ontology_enrichment_uberon=UBERON:0003929!2.80e-12!54;UBERON:0009497!2.11e-10!25;UBERON:0000015!2.11e-10!25;UBERON:0002423!2.11e-10!25;UBERON:0006235!2.11e-10!25;UBERON:0004161!2.11e-10!25;UBERON:0004921!4.97e-10!129;UBERON:0004185!4.97e-10!129;UBERON:0005409!2.61e-09!35;UBERON:0004911!3.31e-09!1;UBERON:0001007!3.64e-09!155;UBERON:0001555!3.64e-09!155;UBERON:0007026!3.64e-09!155;UBERON:0005911!3.69e-09!82;UBERON:0001242!1.05e-08!4;UBERON:0001262!1.05e-08!4;UBERON:0004786!1.05e-08!4;UBERON:0004808!1.05e-08!4;UBERON:0001277!1.05e-08!4;UBERON:0006834!1.53e-08!1;UBERON:0008835!1.86e-08!22;UBERON:0003894!1.86e-08!22;UBERON:0004119!3.65e-08!169;UBERON:0000925!3.65e-08!169;UBERON:0006595!3.65e-08!169;UBERON:0009854!4.44e-08!23;UBERON:0001155!4.45e-08!9;UBERON:0007499!2.05e-07!25;UBERON:0003350!4.00e-07!5;UBERON:0009856!4.04e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.88e-50;1!UBERON:0004909;4.90e-26;2!UBERON:0001052;1.21e-13;4!UBERON:0001242;1.21e-13;4!UBERON:0001262;1.21e-13;4!UBERON:0004786;1.21e-13;4!UBERON:0004808;1.21e-13;4!UBERON:0001277;1.21e-13;4!UBERON:0004907;3.42e-11;5!UBERON:0001871;2.26e-08;6!UBERON:0000485;2.26e-08;7!UBERON:0003929;2.26e-08;7!UBERON:0003350;1.75e-07;8!UBERON:0001155;8.61e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,2.42e-50,1;UBERON:0004909,5.56e-26,2;UBERON:0001052,1.13e-13,4;UBERON:0001242,1.13e-13,4;UBERON:0001262,1.13e-13,4;UBERON:0004786,1.13e-13,4;UBERON:0004808,1.13e-13,4;UBERON:0001277,1.13e-13,4;UBERON:0004907,3.26e-11,5;UBERON:0001871,2.35e-08,6;UBERON:0003350,1.69e-07,8;UBERON:0001155,8.37e-07,9;UBERON:0000485,8.37e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537063524026827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.816164040795739,1.27217764290547,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.630265458457789,0.412079291905832,0.471824806979294,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.3623618401139,0.098150233615243,4.99863492427305,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr17:36068453..36068464,+ | |||
}} |
Revision as of 13:10, 11 September 2013
Short description: | p@chr17:36068453..36068464, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:36068453..36068464, + |
Coexpression cluster: | C2402_signet_serous_bile_Hepatocyte_duodenum_heart_stomach |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 2.42e-50 | 1 |
seromucus secreting cell | 5.56e-26 | 2 |
epithelial cell of large intestine | 7.14e-26 | 2 |
intestinal epithelial cell | 1.13e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 2.42e-50 | 1 |
epithelium of gonad | 5.56e-26 | 2 |
rectum | 1.13e-13 | 4 |
intestinal mucosa | 1.13e-13 | 4 |
wall of intestine | 1.13e-13 | 4 |
gastrointestinal system mucosa | 1.13e-13 | 4 |
gastrointestinal system epithelium | 1.13e-13 | 4 |
intestinal epithelium | 1.13e-13 | 4 |
lower digestive tract | 3.26e-11 | 5 |
temporal lobe | 2.35e-08 | 6 |
epithelium of mucosa | 1.69e-07 | 8 |
colon | 8.37e-07 | 9 |
simple columnar epithelium | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 2.42e-50 | 1 |
signet ring cell adenocarcinoma | 4.32e-26 | 2 |
adenocarcinoma | 1.02e-18 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.