FFCP PHASE1:Hg19::chr18:39896465..39896470,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C87|description=CAGE_peak_at_chr18:39896465..39896470,+|id=chr18:39896465..39896470,+|ontology_enrichment_celltype=CL:0002535!9.46e-10!2;CL:0002178!9.12e-07!3|ontology_enrichment_celltype_v019=CL:0000243;4.22e-13;15!CL:0000125;4.22e-13;15!CL:0000095;6.95e-12;17!CL:0002319;8.32e-09;25|ontology_enrichment_celltype_v019_2=CL:0000243,4.22e-13,15;CL:0000125,4.22e-13,15;CL:0000030,4.22e-13,15;CL:0000339,4.22e-13,15;CL:0000095,6.95e-12,17;CL:0000123,6.95e-12,17;CL:0002319,8.32e-09,25|ontology_enrichment_development_v019=UBERON:0003056;2.39e-66;3!UBERON:0006238;2.25e-19;10!CL:0000339;4.22e-13;15|ontology_enrichment_disease=DOID:225!8.72e-18!1;DOID:74!1.44e-09!2;DOID:3493!1.57e-09!2|ontology_enrichment_disease_v019=DOID:3093;6.76e-18;11|ontology_enrichment_disease_v019_2=DOID:3093,6.76e-18,11|ontology_enrichment_uberon=UBERON:0006955!9.46e-10!2;UBERON:0004801!9.46e-10!2;UBERON:0001870!2.02e-09!2|ontology_enrichment_uberon_v019=UBERON:0000966;1.48e-40;5!UBERON:0005388;1.48e-40;5!UBERON:0001802;1.48e-40;5!UBERON:0000019;6.95e-12;19!UBERON:0000047;6.95e-12;19!UBERON:0004088;6.95e-12;19!UBERON:0010230;6.95e-12;19!UBERON:0000970;2.29e-11;20!UBERON:0002104;6.74e-11;21!UBERON:0001456;6.74e-11;21!UBERON:0000020;4.42e-10;23!UBERON:0001032;1.01e-09;24!UBERON:0004456;1.01e-09;24|ontology_enrichment_uberon_v019_2=UBERON:0000966,4.27e-34,6;UBERON:0005388,4.27e-34,6;UBERON:0001802,4.27e-34,6;UBERON:0000019,2.29e-11,20;UBERON:0000047,2.29e-11,20;UBERON:0010312,2.29e-11,20;UBERON:0004088,2.29e-11,20;UBERON:0010230,2.29e-11,20;UBERON:0003072,2.29e-11,20;UBERON:0004128,2.29e-11,20;UBERON:0003071,2.29e-11,20;UBERON:0000970,6.74e-11,21;UBERON:0002104,6.74e-11,21;UBERON:0001456,1.80e-10,22;UBERON:0000020,1.01e-09,24;UBERON:0001032,1.01e-09,24;UBERON:0004456,1.01e-09,24;UBERON:0005085,7.41e-08,31|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7404083519818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr18:39896465..39896470,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C87 | |||
|description=CAGE_peak_at_chr18:39896465..39896470,+ | |||
|id=chr18:39896465..39896470,+ | |||
|ontology_enrichment_celltype=CL:0002535!9.46e-10!2;CL:0002178!9.12e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000243;4.22e-13;15!CL:0000125;4.22e-13;15!CL:0000095;6.95e-12;17!CL:0002319;8.32e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,4.22e-13,15;CL:0000125,4.22e-13,15;CL:0000030,4.22e-13,15;CL:0000339,4.22e-13,15;CL:0000095,6.95e-12,17;CL:0000123,6.95e-12,17;CL:0002319,8.32e-09,25 | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.39e-66;3!UBERON:0006238;2.25e-19;10!CL:0000339;4.22e-13;15 | |||
|ontology_enrichment_disease=DOID:225!8.72e-18!1;DOID:74!1.44e-09!2;DOID:3493!1.57e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:3093;6.76e-18;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,6.76e-18,11 | |||
|ontology_enrichment_uberon=UBERON:0006955!9.46e-10!2;UBERON:0004801!9.46e-10!2;UBERON:0001870!2.02e-09!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.48e-40;5!UBERON:0005388;1.48e-40;5!UBERON:0001802;1.48e-40;5!UBERON:0000019;6.95e-12;19!UBERON:0000047;6.95e-12;19!UBERON:0004088;6.95e-12;19!UBERON:0010230;6.95e-12;19!UBERON:0000970;2.29e-11;20!UBERON:0002104;6.74e-11;21!UBERON:0001456;6.74e-11;21!UBERON:0000020;4.42e-10;23!UBERON:0001032;1.01e-09;24!UBERON:0004456;1.01e-09;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,4.27e-34,6;UBERON:0005388,4.27e-34,6;UBERON:0001802,4.27e-34,6;UBERON:0000019,2.29e-11,20;UBERON:0000047,2.29e-11,20;UBERON:0010312,2.29e-11,20;UBERON:0004088,2.29e-11,20;UBERON:0010230,2.29e-11,20;UBERON:0003072,2.29e-11,20;UBERON:0004128,2.29e-11,20;UBERON:0003071,2.29e-11,20;UBERON:0000970,6.74e-11,21;UBERON:0002104,6.74e-11,21;UBERON:0001456,1.80e-10,22;UBERON:0000020,1.01e-09,24;UBERON:0001032,1.01e-09,24;UBERON:0004456,1.01e-09,24;UBERON:0005085,7.41e-08,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7404083519818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:39896465..39896470,+ | |||
}} |
Revision as of 17:29, 11 September 2013
Short description: | p@chr18:39896465..39896470, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:39896465..39896470, + |
Coexpression cluster: | C87_retinoblastoma_left_nonsmall_heart_small_diaphragm_bronchogenic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 4.22e-13 | 15 |
glial cell | 4.22e-13 | 15 |
glioblast | 4.22e-13 | 15 |
glioblast (sensu Vertebrata) | 4.22e-13 | 15 |
neuron associated cell | 6.95e-12 | 17 |
neuron associated cell (sensu Vertebrata) | 6.95e-12 | 17 |
neural cell | 8.32e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
retina | 4.27e-34 | 6 |
photoreceptor array | 4.27e-34 | 6 |
posterior segment of eyeball | 4.27e-34 | 6 |
camera-type eye | 2.29e-11 | 20 |
simple eye | 2.29e-11 | 20 |
immature eye | 2.29e-11 | 20 |
ocular region | 2.29e-11 | 20 |
eyeball of camera-type eye | 2.29e-11 | 20 |
optic cup | 2.29e-11 | 20 |
optic vesicle | 2.29e-11 | 20 |
eye primordium | 2.29e-11 | 20 |
eye | 6.74e-11 | 21 |
visual system | 6.74e-11 | 21 |
face | 1.80e-10 | 22 |
sense organ | 1.01e-09 | 24 |
sensory system | 1.01e-09 | 24 |
entire sense organ system | 1.01e-09 | 24 |
ectodermal placode | 7.41e-08 | 31 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 6.76e-18 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.