FFCP PHASE1:Hg19::chr19:40006057..40006068,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=348303|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=|TSSclassifier=W|UniProt=P59797|association_with_transcript=269bp_to_BC117331_5end|coexpression_cluster_id=C49|description=CAGE_peak_2_at_SELV_5end|id=chr19:40006057..40006068,+|ontology_enrichment_celltype=CL:0002322!6.49e-19!5;CL:0000039!1.17e-12!7;CL:0000586!1.17e-12!7|ontology_enrichment_celltype_v019=CL:0002322;7.16e-49;5!CL:0000540;9.12e-24;6!CL:0000404;9.12e-24;6!CL:0002321;1.34e-16;15!CL:0000148;2.79e-14;10!CL:0000147;2.23e-10;14!CL:0000039;1.24e-09;7!CL:0000586;1.24e-09;7!CL:0000710;1.98e-07;20|ontology_enrichment_celltype_v019_2=CL:0002322,5.97e-49,5;CL:0000540,7.83e-24,6;CL:0000031,7.83e-24,6;CL:0000404,7.83e-24,6;CL:0000047,4.69e-18,8;CL:0000148,2.44e-14,10;CL:0000541,2.44e-14,10;CL:0000147,2.03e-10,14;CL:0000039,1.47e-09,7;CL:0000586,1.47e-09,7;CL:0000133,7.76e-09,59;CL:0000710,1.85e-07,20;CL:0000221,3.12e-07,72|ontology_enrichment_development_v019=CL:0000031;9.12e-24;6|ontology_enrichment_disease=DOID:3095!3.77e-09!22;DOID:2994!3.77e-09!22;DOID:5409!4.38e-08!4|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005743!8.64e-12!86;UBERON:0000073!1.78e-11!94;UBERON:0001016!1.78e-11!94;UBERON:0001017!3.18e-11!82;UBERON:0000473!1.24e-10!8;UBERON:0001869!4.22e-08!32;UBERON:0001049!4.87e-08!57;UBERON:0005068!4.87e-08!57;UBERON:0006241!4.87e-08!57;UBERON:0007135!4.87e-08!57;UBERON:0002619!7.47e-08!22;UBERON:0002791!8.26e-08!33;UBERON:0003135!1.21e-07!11;UBERON:0002020!1.56e-07!34;UBERON:0003528!1.56e-07!34;UBERON:0001893!1.56e-07!34;UBERON:0000991!4.59e-07!21;UBERON:0009196!4.59e-07!21;UBERON:0009117!4.59e-07!21;UBERON:0005564!4.59e-07!21;UBERON:0003075!5.13e-07!86;UBERON:0007284!5.13e-07!86;UBERON:0000956!8.32e-07!25;UBERON:0000203!8.32e-07!25|ontology_enrichment_uberon_v019=UBERON:0000922;1.59e-08;49|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43947412259191,0.662648841607426,1.74290914304278,1.0366105501537,1.7662459561294,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28188885352968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,2.74463030566391,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0.853828638089378,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0.136203406111576,1.60753148465019,2.61324929534744,2.9080823662043,0,0,0,0,0,0.786818822024972,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0.124192805882767,0,0,0,0.570930667089935,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511577485214607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.40341013740704,0,0,0,0,0,0,0,0.126831620387814,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0.157115589916002,0,1.82631744101899,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0.329821550236287,0.150962843566674,0,0,0,0,0,0.196308467114945,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0,0.788857810965923,0.0679914901909147,0,0,0,0,0,0.630832124175395,0.874124575709564,0,1.01988829741982,0.26721740526556,0.18378979906969,0.50141507858475,0.0757786982182394,0,0,0,0,0.23806443146374,0,0,0,0.12729431655633,1.0105859447911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@SELV}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=348303 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=W | |||
|UniProt=P59797 | |||
|association_with_transcript=269bp_to_BC117331_5end | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_2_at_SELV_5end | |||
|id=chr19:40006057..40006068,+ | |||
|ontology_enrichment_celltype=CL:0002322!6.49e-19!5;CL:0000039!1.17e-12!7;CL:0000586!1.17e-12!7 | |||
|ontology_enrichment_celltype_v019=CL:0002322;7.16e-49;5!CL:0000540;9.12e-24;6!CL:0000404;9.12e-24;6!CL:0002321;1.34e-16;15!CL:0000148;2.79e-14;10!CL:0000147;2.23e-10;14!CL:0000039;1.24e-09;7!CL:0000586;1.24e-09;7!CL:0000710;1.98e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,5.97e-49,5;CL:0000540,7.83e-24,6;CL:0000031,7.83e-24,6;CL:0000404,7.83e-24,6;CL:0000047,4.69e-18,8;CL:0000148,2.44e-14,10;CL:0000541,2.44e-14,10;CL:0000147,2.03e-10,14;CL:0000039,1.47e-09,7;CL:0000586,1.47e-09,7;CL:0000133,7.76e-09,59;CL:0000710,1.85e-07,20;CL:0000221,3.12e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000031;9.12e-24;6 | |||
|ontology_enrichment_disease=DOID:3095!3.77e-09!22;DOID:2994!3.77e-09!22;DOID:5409!4.38e-08!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!8.64e-12!86;UBERON:0000073!1.78e-11!94;UBERON:0001016!1.78e-11!94;UBERON:0001017!3.18e-11!82;UBERON:0000473!1.24e-10!8;UBERON:0001869!4.22e-08!32;UBERON:0001049!4.87e-08!57;UBERON:0005068!4.87e-08!57;UBERON:0006241!4.87e-08!57;UBERON:0007135!4.87e-08!57;UBERON:0002619!7.47e-08!22;UBERON:0002791!8.26e-08!33;UBERON:0003135!1.21e-07!11;UBERON:0002020!1.56e-07!34;UBERON:0003528!1.56e-07!34;UBERON:0001893!1.56e-07!34;UBERON:0000991!4.59e-07!21;UBERON:0009196!4.59e-07!21;UBERON:0009117!4.59e-07!21;UBERON:0005564!4.59e-07!21;UBERON:0003075!5.13e-07!86;UBERON:0007284!5.13e-07!86;UBERON:0000956!8.32e-07!25;UBERON:0000203!8.32e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.59e-08;49 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43947412259191,0.662648841607426,1.74290914304278,1.0366105501537,1.7662459561294,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28188885352968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,2.74463030566391,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0.853828638089378,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0.136203406111576,1.60753148465019,2.61324929534744,2.9080823662043,0,0,0,0,0,0.786818822024972,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0.124192805882767,0,0,0,0.570930667089935,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511577485214607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.40341013740704,0,0,0,0,0,0,0,0.126831620387814,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0.157115589916002,0,1.82631744101899,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0.329821550236287,0.150962843566674,0,0,0,0,0,0.196308467114945,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0,0.788857810965923,0.0679914901909147,0,0,0,0,0,0.630832124175395,0.874124575709564,0,1.01988829741982,0.26721740526556,0.18378979906969,0.50141507858475,0.0757786982182394,0,0,0,0,0.23806443146374,0,0,0,0.12729431655633,1.0105859447911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@SELV | |||
}} |
Revision as of 20:36, 11 September 2013
Short description: | p2@SELV |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SELV_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 269bp_to_BC117331_5end |
EntrezGene: | SELV |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.97e-49 | 5 |
neuron | 7.83e-24 | 6 |
neuroblast | 7.83e-24 | 6 |
electrically signaling cell | 7.83e-24 | 6 |
neuronal stem cell | 4.69e-18 | 8 |
melanocyte | 2.44e-14 | 10 |
melanoblast | 2.44e-14 | 10 |
pigment cell | 2.03e-10 | 14 |
germ line cell | 1.47e-09 | 7 |
germ cell | 1.47e-09 | 7 |
neurectodermal cell | 7.76e-09 | 59 |
neurecto-epithelial cell | 1.85e-07 | 20 |
ectodermal cell | 3.12e-07 | 72 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.