FFCP PHASE1:Hg19::chr19:45116921..45116931,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=147710|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=40040|TSSclassifier=S|UniProt=A1L1A6|association_with_transcript=-8bp_to_ENST00000402988,NM_001205280_5end|coexpression_cluster_id=C304|description=CAGE_peak_3_at_IGSF23_5end|id=chr19:45116921..45116931,+|ontology_enrichment_celltype=CL:0000181!3.85e-24!12;CL:0000417!3.85e-24!12;CL:0000668!3.85e-24!12;CL:0000414!3.85e-24!12;CL:0000412!3.85e-24!12;CL:0000182!3.85e-24!12;CL:0002563!1.97e-12!4;CL:0000223!5.16e-09!59;CL:0002253!5.60e-07!2|ontology_enrichment_celltype_v019=CL:0000182;5.80e-07;12|ontology_enrichment_celltype_v019_2=CL:0000182,5.98e-07,12|ontology_enrichment_development_v019=UBERON:0004161;2.04e-15;11!UBERON:0009497;3.78e-13;13|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.24e-29!19;UBERON:0006925!1.24e-29!19;UBERON:0008836!1.24e-29!19;UBERON:0008835!1.58e-25!22;UBERON:0003894!1.58e-25!22;UBERON:0009854!2.13e-24!23;UBERON:0007499!2.09e-22!25;UBERON:0009497!2.09e-22!25;UBERON:0000015!2.09e-22!25;UBERON:0002423!2.09e-22!25;UBERON:0006235!2.09e-22!25;UBERON:0004161!2.09e-22!25;UBERON:0005057!1.59e-21!26;UBERON:0009856!1.59e-21!26;UBERON:0000160!7.31e-20!27;UBERON:0002365!5.74e-18!31;UBERON:0002330!5.74e-18!31;UBERON:0003929!1.88e-16!54;UBERON:0002368!7.51e-16!35;UBERON:0004921!7.57e-16!129;UBERON:0004185!7.57e-16!129;UBERON:0005409!2.51e-15!35;UBERON:0001007!6.75e-13!155;UBERON:0001555!6.75e-13!155;UBERON:0007026!6.75e-13!155;UBERON:0001242!1.97e-12!4;UBERON:0001262!1.97e-12!4;UBERON:0004786!1.97e-12!4;UBERON:0004808!1.97e-12!4;UBERON:0001277!1.97e-12!4;UBERON:0001052!2.49e-12!4;UBERON:0000949!3.37e-12!45;UBERON:0004119!1.12e-11!169;UBERON:0000925!1.12e-11!169;UBERON:0006595!1.12e-11!169;UBERON:0005911!1.79e-10!82;UBERON:0003350!3.93e-10!5;UBERON:0000059!4.29e-10!11;UBERON:0004907!4.73e-10!5;UBERON:0005172!7.22e-10!55;UBERON:0005173!7.22e-10!55;UBERON:0002530!3.72e-09!59;UBERON:0002417!7.79e-09!61;UBERON:0000916!7.79e-09!61;UBERON:0002108!1.07e-07!14|ontology_enrichment_uberon_v019=UBERON:0002108;5.34e-33;4!UBERON:0000160;2.15e-16;17!UBERON:0002107;1.49e-15;19!UBERON:0006925;1.49e-15;19!UBERON:0005409;6.49e-13;22!UBERON:0002423;6.56e-12;25!UBERON:0002365;1.39e-09;31!UBERON:0002330;1.39e-09;31!UBERON:0001007;7.23e-08;81!UBERON:0002368;1.02e-07;33!UBERON:0004921;1.33e-07;33!UBERON:0002114;2.47e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002108,5.98e-33,4;UBERON:0000160,1.91e-16,17;UBERON:0002107,1.15e-15,19;UBERON:0006925,1.15e-15,19;UBERON:0008836,1.15e-15,19;UBERON:0008835,1.39e-13,22;UBERON:0003894,1.39e-13,22;UBERON:0009854,5.23e-13,23;UBERON:0007499,5.38e-12,25;UBERON:0009497,5.38e-12,25;UBERON:0000015,5.38e-12,25;UBERON:0002423,5.38e-12,25;UBERON:0006235,5.38e-12,25;UBERON:0004161,5.38e-12,25;UBERON:0009856,1.51e-11,26;UBERON:0005409,1.69e-11,25;UBERON:0002365,9.77e-10,31;UBERON:0002330,9.77e-10,31;UBERON:0004921,2.74e-09,118;UBERON:0002368,1.17e-08,35;UBERON:0001007,1.82e-07,145;UBERON:0001555,1.82e-07,145;UBERON:0007026,1.82e-07,145;UBERON:0002114,3.16e-07,2;UBERON:0000949,8.65e-07,45|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,1.32686346755009,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26053091691558,0.659326867049332,0.606631894687664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46552233678082,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28027216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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=147710 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=40040 | |||
|TSSclassifier=S | |||
|UniProt=A1L1A6 | |||
|association_with_transcript=-8bp_to_ENST00000402988,NM_001205280_5end | |||
|coexpression_cluster_id=C304 | |||
|description=CAGE_peak_3_at_IGSF23_5end | |||
|id=chr19:45116921..45116931,+ | |||
|ontology_enrichment_celltype=CL:0000181!3.85e-24!12;CL:0000417!3.85e-24!12;CL:0000668!3.85e-24!12;CL:0000414!3.85e-24!12;CL:0000412!3.85e-24!12;CL:0000182!3.85e-24!12;CL:0002563!1.97e-12!4;CL:0000223!5.16e-09!59;CL:0002253!5.60e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.80e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.98e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.04e-15;11!UBERON:0009497;3.78e-13;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.24e-29!19;UBERON:0006925!1.24e-29!19;UBERON:0008836!1.24e-29!19;UBERON:0008835!1.58e-25!22;UBERON:0003894!1.58e-25!22;UBERON:0009854!2.13e-24!23;UBERON:0007499!2.09e-22!25;UBERON:0009497!2.09e-22!25;UBERON:0000015!2.09e-22!25;UBERON:0002423!2.09e-22!25;UBERON:0006235!2.09e-22!25;UBERON:0004161!2.09e-22!25;UBERON:0005057!1.59e-21!26;UBERON:0009856!1.59e-21!26;UBERON:0000160!7.31e-20!27;UBERON:0002365!5.74e-18!31;UBERON:0002330!5.74e-18!31;UBERON:0003929!1.88e-16!54;UBERON:0002368!7.51e-16!35;UBERON:0004921!7.57e-16!129;UBERON:0004185!7.57e-16!129;UBERON:0005409!2.51e-15!35;UBERON:0001007!6.75e-13!155;UBERON:0001555!6.75e-13!155;UBERON:0007026!6.75e-13!155;UBERON:0001242!1.97e-12!4;UBERON:0001262!1.97e-12!4;UBERON:0004786!1.97e-12!4;UBERON:0004808!1.97e-12!4;UBERON:0001277!1.97e-12!4;UBERON:0001052!2.49e-12!4;UBERON:0000949!3.37e-12!45;UBERON:0004119!1.12e-11!169;UBERON:0000925!1.12e-11!169;UBERON:0006595!1.12e-11!169;UBERON:0005911!1.79e-10!82;UBERON:0003350!3.93e-10!5;UBERON:0000059!4.29e-10!11;UBERON:0004907!4.73e-10!5;UBERON:0005172!7.22e-10!55;UBERON:0005173!7.22e-10!55;UBERON:0002530!3.72e-09!59;UBERON:0002417!7.79e-09!61;UBERON:0000916!7.79e-09!61;UBERON:0002108!1.07e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;5.34e-33;4!UBERON:0000160;2.15e-16;17!UBERON:0002107;1.49e-15;19!UBERON:0006925;1.49e-15;19!UBERON:0005409;6.49e-13;22!UBERON:0002423;6.56e-12;25!UBERON:0002365;1.39e-09;31!UBERON:0002330;1.39e-09;31!UBERON:0001007;7.23e-08;81!UBERON:0002368;1.02e-07;33!UBERON:0004921;1.33e-07;33!UBERON:0002114;2.47e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,5.98e-33,4;UBERON:0000160,1.91e-16,17;UBERON:0002107,1.15e-15,19;UBERON:0006925,1.15e-15,19;UBERON:0008836,1.15e-15,19;UBERON:0008835,1.39e-13,22;UBERON:0003894,1.39e-13,22;UBERON:0009854,5.23e-13,23;UBERON:0007499,5.38e-12,25;UBERON:0009497,5.38e-12,25;UBERON:0000015,5.38e-12,25;UBERON:0002423,5.38e-12,25;UBERON:0006235,5.38e-12,25;UBERON:0004161,5.38e-12,25;UBERON:0009856,1.51e-11,26;UBERON:0005409,1.69e-11,25;UBERON:0002365,9.77e-10,31;UBERON:0002330,9.77e-10,31;UBERON:0004921,2.74e-09,118;UBERON:0002368,1.17e-08,35;UBERON:0001007,1.82e-07,145;UBERON:0001555,1.82e-07,145;UBERON:0007026,1.82e-07,145;UBERON:0002114,3.16e-07,2;UBERON:0000949,8.65e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,1.32686346755009,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26053091691558,0.659326867049332,0.606631894687664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46552233678082,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31196068783506,1.31135736302374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@IGSF23 | |||
}} |
Revision as of 21:06, 11 September 2013
Short description: | p3@IGSF23 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_IGSF23_5end |
Coexpression cluster: | [[Coexpression cluster:C304|]] |
Association with transcript: | -8bp_to_ENST00000402988, NM_001205280_5end |
EntrezGene: | IGSF23 |
HGNC: | 40040 |
UniProt: | A1L1A6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.98e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
small intestine | 5.98e-33 | 4 |
intestine | 1.91e-16 | 17 |
liver | 1.15e-15 | 19 |
digestive gland | 1.15e-15 | 19 |
liver bud | 1.15e-15 | 19 |
hepatic diverticulum | 1.39e-13 | 22 |
liver primordium | 1.39e-13 | 22 |
digestive tract diverticulum | 5.23e-13 | 23 |
epithelial sac | 5.38e-12 | 25 |
epithelium of foregut-midgut junction | 5.38e-12 | 25 |
anatomical boundary | 5.38e-12 | 25 |
hepatobiliary system | 5.38e-12 | 25 |
foregut-midgut junction | 5.38e-12 | 25 |
septum transversum | 5.38e-12 | 25 |
sac | 1.51e-11 | 26 |
gastrointestinal system | 1.69e-11 | 25 |
exocrine gland | 9.77e-10 | 31 |
exocrine system | 9.77e-10 | 31 |
subdivision of digestive tract | 2.74e-09 | 118 |
endocrine gland | 1.17e-08 | 35 |
digestive system | 1.82e-07 | 145 |
digestive tract | 1.82e-07 | 145 |
primitive gut | 1.82e-07 | 145 |
duodenum | 3.16e-07 | 2 |
endocrine system | 8.65e-07 | 45 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.