FFCP PHASE1:Hg19::chr19:46526304..46526317,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8993|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8904|TSSclassifier=S|UniProt=O75594|association_with_transcript=5bp_to_uc002pdx.1_5end|coexpression_cluster_id=C2|description=CAGE_peak_1_at_PGLYRP1_5end|id=chr19:46526304..46526317,-|ontology_enrichment_celltype=CL:0000094!4.05e-20!8;CL:0000081!3.85e-14!11;CL:0000775!8.14e-09!3;CL:0000767!2.38e-08!3;CL:0000766!4.81e-08!76|ontology_enrichment_celltype_v019=CL:0000094;1.59e-39;8!CL:0000081;2.12e-28;11!CL:0000775;2.31e-16;3!CL:0000767;2.01e-15;3!CL:0000771;2.79e-11;2|ontology_enrichment_celltype_v019_2=CL:0000094,1.59e-39,8;CL:0000081,2.12e-28,11;CL:0000775,2.31e-16,3;CL:0000767,2.06e-15,3;CL:0000771,2.72e-11,2;CL:0000766,2.87e-07,72|ontology_enrichment_development_v019=UBERON:0004872;3.90e-11;7|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.22e-31!115;UBERON:0000178!4.14e-18!15;UBERON:0000179!4.14e-18!15;UBERON:0000463!4.14e-18!15;UBERON:0002193!1.62e-10!112;UBERON:0002390!2.17e-10!102;UBERON:0003061!2.17e-10!102;UBERON:0004151!6.13e-08!3|ontology_enrichment_uberon_v019=UBERON:0000178;8.42e-31;15!UBERON:0000179;8.42e-31;15!UBERON:0000463;8.42e-31;15!UBERON:0002390;5.08e-24;32!UBERON:0004177;8.25e-16;5!UBERON:0005057;8.25e-16;5!UBERON:0002193;1.11e-12;42!UBERON:0002370;9.64e-11;2!UBERON:0005058;9.64e-11;2!UBERON:0009113;9.64e-11;2!UBERON:0004151;1.90e-07;3!UBERON:0002106;2.02e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.56e-31,15;UBERON:0000179,8.56e-31,15;UBERON:0000463,8.56e-31,15;UBERON:0007023,3.42e-12,114;UBERON:0002390,1.05e-11,98;UBERON:0003061,1.05e-11,98;UBERON:0004177,2.07e-11,7;UBERON:0005057,2.07e-11,7;UBERON:0002193,2.86e-10,108;UBERON:0002106,1.81e-07,3;UBERON:0004854,1.81e-07,3;UBERON:0009034,1.81e-07,3;UBERON:0002095,1.81e-07,3;UBERON:0004782,1.81e-07,3;UBERON:0003281,1.81e-07,3;UBERON:0009664,1.81e-07,3;UBERON:0002296,1.81e-07,3;UBERON:0005602,1.81e-07,3;UBERON:0001179,1.81e-07,3;UBERON:0006293,1.81e-07,3;UBERON:0004151,2.12e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.1611139665605,14.9693465257913,1.39334510984468,0,0,0,0,0,0,0,0,0,0,0,0,0.872389432677388,0,0.485168122375632,0.697287110717054,0,0,0.28769239232215,0,0,2.41321976515633,0,0,0.752969358170419,0,0,2.75475503133812,0,0,0.329851300186716,0,0,1.45104619314292,0,0,0.75374599577023,0,0.217188844705117,2.42159801053347,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,1.17447437874188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58902087180316,50.4114343392823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,47.9364495326197,32.9077605124427,59.6758339347891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01999881146064,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,5.58192370155386,4.58782324285425,11.9625909306574,2.38231775457789,4.11362273086194,5.18778648954174,4.86028293514303,6.34500141035416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7896618469388,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,1.83309043480088,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0.199679000498991,0,3.34757186162809,4.43410918412393,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,2.20309270166992,0,0,0,2.1440859791201,9.93137955548147,0,0,0,0,0,0,0,0,0.146552233678082,22.5261711150776,0,0,0,0,4.59185874041087,0.471612915298998,1.24271716604159,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0.253663240775627,0,0,0,0,0,0,0,1.21393120847326,0.682986574053893,1.5966426629275,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,2.3196288626764,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8993 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8904 | |||
|TSSclassifier=S | |||
|UniProt=O75594 | |||
|association_with_transcript=5bp_to_uc002pdx.1_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_PGLYRP1_5end | |||
|id=chr19:46526304..46526317,- | |||
|ontology_enrichment_celltype=CL:0000094!4.05e-20!8;CL:0000081!3.85e-14!11;CL:0000775!8.14e-09!3;CL:0000767!2.38e-08!3;CL:0000766!4.81e-08!76 | |||
|ontology_enrichment_celltype_v019=CL:0000094;1.59e-39;8!CL:0000081;2.12e-28;11!CL:0000775;2.31e-16;3!CL:0000767;2.01e-15;3!CL:0000771;2.79e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,1.59e-39,8;CL:0000081,2.12e-28,11;CL:0000775,2.31e-16,3;CL:0000767,2.06e-15,3;CL:0000771,2.72e-11,2;CL:0000766,2.87e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0004872;3.90e-11;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.22e-31!115;UBERON:0000178!4.14e-18!15;UBERON:0000179!4.14e-18!15;UBERON:0000463!4.14e-18!15;UBERON:0002193!1.62e-10!112;UBERON:0002390!2.17e-10!102;UBERON:0003061!2.17e-10!102;UBERON:0004151!6.13e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.42e-31;15!UBERON:0000179;8.42e-31;15!UBERON:0000463;8.42e-31;15!UBERON:0002390;5.08e-24;32!UBERON:0004177;8.25e-16;5!UBERON:0005057;8.25e-16;5!UBERON:0002193;1.11e-12;42!UBERON:0002370;9.64e-11;2!UBERON:0005058;9.64e-11;2!UBERON:0009113;9.64e-11;2!UBERON:0004151;1.90e-07;3!UBERON:0002106;2.02e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.56e-31,15;UBERON:0000179,8.56e-31,15;UBERON:0000463,8.56e-31,15;UBERON:0007023,3.42e-12,114;UBERON:0002390,1.05e-11,98;UBERON:0003061,1.05e-11,98;UBERON:0004177,2.07e-11,7;UBERON:0005057,2.07e-11,7;UBERON:0002193,2.86e-10,108;UBERON:0002106,1.81e-07,3;UBERON:0004854,1.81e-07,3;UBERON:0009034,1.81e-07,3;UBERON:0002095,1.81e-07,3;UBERON:0004782,1.81e-07,3;UBERON:0003281,1.81e-07,3;UBERON:0009664,1.81e-07,3;UBERON:0002296,1.81e-07,3;UBERON:0005602,1.81e-07,3;UBERON:0001179,1.81e-07,3;UBERON:0006293,1.81e-07,3;UBERON:0004151,2.12e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.1611139665605,14.9693465257913,1.39334510984468,0,0,0,0,0,0,0,0,0,0,0,0,0.872389432677388,0,0.485168122375632,0.697287110717054,0,0,0.28769239232215,0,0,2.41321976515633,0,0,0.752969358170419,0,0,2.75475503133812,0,0,0.329851300186716,0,0,1.45104619314292,0,0,0.75374599577023,0,0.217188844705117,2.42159801053347,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,1.17447437874188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58902087180316,50.4114343392823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,47.9364495326197,32.9077605124427,59.6758339347891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01999881146064,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,5.58192370155386,4.58782324285425,11.9625909306574,2.38231775457789,4.11362273086194,5.18778648954174,4.86028293514303,6.34500141035416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7896618469388,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,1.83309043480088,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0.199679000498991,0,3.34757186162809,4.43410918412393,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,2.20309270166992,0,0,0,2.1440859791201,9.93137955548147,0,0,0,0,0,0,0,0,0.146552233678082,22.5261711150776,0,0,0,0,4.59185874041087,0.471612915298998,1.24271716604159,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0.253663240775627,0,0,0,0,0,0,0,1.21393120847326,0.682986574053893,1.5966426629275,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,2.3196288626764,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,1.59772660565751,38.868106448067,0,0,0,0,1.46067277649303,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,10.2352311312471,0,2.90650094262028,7.20066685831952,0,0.509177266225319,0,0.217716747896961,0,0.202056159043763,0.143444410785353,0,0,0,0,0,0,0,0,1.33151354837103,0.805095174364105,0 | |||
|short_description=p1@PGLYRP1 | |||
}} |
Revision as of 21:22, 11 September 2013
Short description: | p1@PGLYRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PGLYRP1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 5bp_to_uc002pdx.1_5end |
EntrezGene: | PGLYRP1 |
HGNC: | 8904 |
UniProt: | O75594 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 1.59e-39 | 8 |
blood cell | 2.12e-28 | 11 |
neutrophil | 2.31e-16 | 3 |
basophil | 2.06e-15 | 3 |
eosinophil | 2.72e-11 | 2 |
myeloid leukocyte | 2.87e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
blood | 8.56e-31 | 15 |
haemolymphatic fluid | 8.56e-31 | 15 |
organism substance | 8.56e-31 | 15 |
adult organism | 3.42e-12 | 114 |
hematopoietic system | 1.05e-11 | 98 |
blood island | 1.05e-11 | 98 |
hemopoietic organ | 2.07e-11 | 7 |
immune organ | 2.07e-11 | 7 |
hemolymphoid system | 2.86e-10 | 108 |
spleen | 1.81e-07 | 3 |
gastrointestinal system mesentery | 1.81e-07 | 3 |
stomach region | 1.81e-07 | 3 |
mesentery | 1.81e-07 | 3 |
gastrointestinal system serosa | 1.81e-07 | 3 |
mesentery of stomach | 1.81e-07 | 3 |
gut mesentery | 1.81e-07 | 3 |
dorsal mesentery | 1.81e-07 | 3 |
dorsal mesogastrium | 1.81e-07 | 3 |
peritoneal cavity | 1.81e-07 | 3 |
spleen primordium | 1.81e-07 | 3 |
cardiac chamber | 2.12e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.