FFCP PHASE1:Hg19::chr19:49436936..49436971,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=27294|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17887|TSSclassifier=S|UniProt=Q9UQ10,E5RGT8,E5RFE0|association_with_transcript=0bp_to_ENST00000221403,ENST00000522614,ENST00000523250,NM_014475,uc002ple.1_5end|description=CAGE_peak_1_at_DHDH_5end|id=chr19:49436936..49436971,+|ontology_enrichment_celltype=CL:0002076!4.97e-11!43;CL:0000066!7.63e-10!254;CL:0000223!7.90e-09!59|ontology_enrichment_celltype_v019=CL:0000235;5.75e-10;6!CL:0002076;4.60e-08;42!CL:0002202;6.63e-08;9!CL:0002632;6.63e-08;9!CL:0002322;3.21e-07;5|ontology_enrichment_celltype_v019_2=CL:0000235,2.27e-10,6;CL:0002076,2.56e-10,42;CL:0000066,1.90e-09,253;CL:0002202,4.44e-08,9;CL:0002632,4.44e-08,9;CL:0000223,1.11e-07,58;CL:0002322,4.51e-07,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!2.39e-10!106;DOID:0050687!1.04e-09!143|ontology_enrichment_disease_v019=DOID:1749;2.18e-08;14|ontology_enrichment_disease_v019_2=DOID:1749,2.10e-08,14|ontology_enrichment_uberon=UBERON:0004119!7.61e-08!169;UBERON:0000925!7.61e-08!169;UBERON:0006595!7.61e-08!169;UBERON:0005153!2.60e-07!37;UBERON:0005178!4.72e-07!34;UBERON:0002224!4.72e-07!34;UBERON:0005177!5.02e-07!107|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,3.48900583986214,0,0,0.123766352960047,0,0,0,0.730310090387373,0,0.246242116153576,0,0,0.286235987131057,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0.154816123316076,6.43594857135249,2.409647350226,1.47901604066715,0.0774672005803016,0,0,0.553995408531877,0,0.434021741431704,3.80656306207871,7.44955431843653,2.57575567634187,0.145398238779565,0,0.242584061187816,0.232429036905685,0,0.619412741790207,0.28769239232215,0,0.47296445977717,0,0.645484683583826,0,0.376484679085209,0,0.898893937780338,0,0.320929027076094,1.27867425159808,0,0,0,0,0,0,0,0,0.65156653411535,0.605399502633369,0.368277635987565,0.316462387440884,0,0.212604299965044,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0.587237189370939,0,0,0,0,0.196709770113833,0.786021525498329,0,0.83593247695339,0.32592226663359,0,1.94826728407911,0.891283655081389,0.589211814949674,0.443067789167242,0.812411591295047,1.28091319725675,1.04047478047903,0.657751618414705,1.10540007114339,0.869409257205157,1.63115219478266,1.07016331235885,2.09071047609954,0.793165398882963,0,0.34362744548263,0.759059076058509,0.637130828648193,0.651083453856419,1.90090408889675,0.602300476311091,0.255973222308837,0,0.947109008176067,1.64225599384209,0.604820229674197,0,0.289648807765598,0,0,0.12786256184353,0,0,0,0,0,0,0,0,11.0022423418079,2.91436230634034,1.11235332835329,0.97364218096405,1.56716763569341,1.06366368415092,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18047026071267,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0.269421344139376,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,1.54608682530637,0.545492241181669,1.43402297694502,1.46368447355514,1.32529768321485,2.32387885739037,1.55491582523056,1.00928340350251,4.37972830890996,0,0,0,0,0,0.118306800039844,0.337169380156203,0,0.220587945464788,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0.882926198829301,1.72183813960359,0,1.53650399572076,1.1240175325762,1.40740561376283,1.94435734832912,0,0,0,0,0,0,0,0,0,0.858486162094873,1.96973604869918,1.63802985597466,2.82399208348584,0.93733833986777,0.503946384596579,0.425325291727159,0.53735113621709,2.03443756959773,3.4504441124869,0,0.880484340132261,1.65862492432618,0.432359860250884,1.13618190083742,0.317489471460845,0.381988425558278,0,0,0.308482478109971,0.600686115687835,0.285826432630578,0,0,0,0.387815147273333,0,0,0,0,0.514414748524284,0,0,0,0.542621605391443,0.823240336780769,0,0.355391948742546,0,0.301439377059586,0,0.099972991182057,4.86495122564762,7.03159928004977,4.21667878966063,0,0,0,0,0,0,5.38008691168931,0.394061520403854,0.646882724578552,0.513372145118994,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,2.27407504055985,1.03473071292505,0,0.184369168541703,0,0.195801157462741,0,0.206768026122887,0,0.213455115606889,2.42502057157008,1.66435439510497,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,1.57117284469109,0.200506470303285,7.09023614806402,0,0,0,0.451199612907412,0.924184045252977,0,0,0.211103257785751,0,0,0,0,0.270946437543853,0.501689773854853,0.764628819135115,2.49322802678617,0,0,1.0457418040996,0,0,0,0.309123034943167,0,0.082509499920588,0,1.30012049207304,0,0,0,0.15350367472613,0,0.214840489736547,0.145016693914229,0,0,0.495854746082934,0.384380134730212,0.255225424989168,0.910420027699949,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0.354761064070598,0.211107635297664,0,0,0,1.73199802905922,2.01090682660736,2.17781969722645,0.753150406214233,0.43050537267123,0,3.54744122829341,0.689170200620878,0.5074476092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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=27294 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17887 | |||
|TSSclassifier=S | |||
|UniProt=Q9UQ10,E5RGT8,E5RFE0 | |||
|association_with_transcript=0bp_to_ENST00000221403,ENST00000522614,ENST00000523250,NM_014475,uc002ple.1_5end | |||
|description=CAGE_peak_1_at_DHDH_5end | |||
|id=chr19:49436936..49436971,+ | |||
|ontology_enrichment_celltype=CL:0002076!4.97e-11!43;CL:0000066!7.63e-10!254;CL:0000223!7.90e-09!59 | |||
|ontology_enrichment_celltype_v019=CL:0000235;5.75e-10;6!CL:0002076;4.60e-08;42!CL:0002202;6.63e-08;9!CL:0002632;6.63e-08;9!CL:0002322;3.21e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,2.27e-10,6;CL:0002076,2.56e-10,42;CL:0000066,1.90e-09,253;CL:0002202,4.44e-08,9;CL:0002632,4.44e-08,9;CL:0000223,1.11e-07,58;CL:0002322,4.51e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.39e-10!106;DOID:0050687!1.04e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.18e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.10e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!7.61e-08!169;UBERON:0000925!7.61e-08!169;UBERON:0006595!7.61e-08!169;UBERON:0005153!2.60e-07!37;UBERON:0005178!4.72e-07!34;UBERON:0002224!4.72e-07!34;UBERON:0005177!5.02e-07!107 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p1@DHDH | |||
}} |
Revision as of 21:42, 11 September 2013
Short description: | p1@DHDH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_DHDH_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000221403, ENST00000522614, ENST00000523250, NM_014475, uc002ple.1_5end |
EntrezGene: | DHDH |
HGNC: | 17887 |
UniProt: | Q9UQ10E5RGT8E5RFE0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 2.27e-10 | 6 |
endo-epithelial cell | 2.56e-10 | 42 |
epithelial cell | 1.90e-09 | 253 |
epithelial cell of tracheobronchial tree | 4.44e-08 | 9 |
epithelial cell of lower respiratory tract | 4.44e-08 | 9 |
endodermal cell | 1.11e-07 | 58 |
embryonic stem cell | 4.51e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.10e-08 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.