FFCP PHASE1:Hg19::chr1:163045698..163045709,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5999|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=10000|TSSclassifier=N|UniProt=|association_with_transcript=-356bp_to_AL137433_5end|description=CAGE_peak_9_at_RGS4_5end|id=chr1:163045698..163045709,+|ontology_enrichment_celltype=CL:0002334!6.02e-07!12;CL:0000359!6.75e-07!32|ontology_enrichment_celltype_v019=CL:0002591;9.12e-14;1!CL:0002593;1.59e-07;2!CL:0002535;1.59e-07;2|ontology_enrichment_celltype_v019_2=CL:0002591,1.10e-13,1;CL:0002535,1.54e-07,2;CL:0002593,2.12e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!9.95e-16!14;DOID:193!1.61e-10!29;DOID:120!7.77e-10!27|ontology_enrichment_disease_v019=DOID:0060084;1.64e-17;3!DOID:127;1.64e-17;3!DOID:0060072;2.21e-13;4!DOID:2394;1.16e-08;14!DOID:120;1.14e-07;27!DOID:193;3.75e-07;29|ontology_enrichment_disease_v019_2=DOID:0060084,9.94e-18,3;DOID:127,9.94e-18,3;DOID:0060072,1.52e-13,4;DOID:2394,8.60e-09,14;DOID:120,9.24e-08,27;DOID:193,3.08e-07,29|ontology_enrichment_uberon=UBERON:0000200!2.12e-11!6;UBERON:0001950!1.86e-10!20;UBERON:0002118!2.26e-10!5;UBERON:0004532!2.26e-10!5;UBERON:0002619!2.64e-09!22;UBERON:0001869!4.24e-09!32;UBERON:0001637!8.81e-09!42;UBERON:0003509!8.81e-09!42;UBERON:0004572!8.81e-09!42;UBERON:0000992!9.53e-09!13;UBERON:0001871!1.35e-08!7;UBERON:0001893!2.24e-08!34;UBERON:0002020!2.51e-08!34;UBERON:0003528!2.51e-08!34;UBERON:0000956!6.45e-08!25;UBERON:0000203!6.45e-08!25;UBERON:0002791!1.72e-07!33;UBERON:0002771!9.10e-07!3|ontology_enrichment_uberon_v019=UBERON:0003134;1.01e-08;33!UBERON:0000474;4.06e-08;37!UBERON:0002771;9.54e-08;2!UBERON:0000078;1.59e-07;2!UBERON:0006955;1.59e-07;2!UBERON:0004801;1.59e-07;2!UBERON:0002012;1.59e-07;2!UBERON:0002456;1.59e-07;2!UBERON:0008886;1.59e-07;2!UBERON:0000995;3.80e-07;17!UBERON:0003975;8.92e-07;18|ontology_enrichment_uberon_v019_2=UBERON:0003134,1.75e-08,37;UBERON:0000474,1.75e-08,37;UBERON:0002771,9.25e-08,2;UBERON:0003100,1.21e-07,41;UBERON:0006955,1.54e-07,2;UBERON:0004801,1.54e-07,2;UBERON:0000078,1.75e-07,2;UBERON:0007497,1.75e-07,2;UBERON:0003643,1.75e-07,2;UBERON:0003504,1.75e-07,2;UBERON:0003469,1.75e-07,2;UBERON:0003496,1.75e-07,2;UBERON:0002012,1.75e-07,2;UBERON:0008886,1.75e-07,2;UBERON:0007303,1.75e-07,2;UBERON:0002061,1.75e-07,2;UBERON:0005432,1.75e-07,2;UBERON:0004363,1.75e-07,2;UBERON:0002456,2.12e-07,2|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443458794925128,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0.506522046658319,0.529636723252875,0,0,0,1.06748995729705,0.49333509683432,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,1.09970290300263,0,0,0,1.19812427745791,0,0,0.144781306667579,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.207970861530807,0.178428988797162,0,0.35142424497814,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0,0,0.128139149255701,0.511707249066704,0.64341568457443,0,0.308419387605311,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,1.39453664789186,0.62962469366128,0,0.616067160352178,0,0,0.37064843820784,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.974853958525138,1.05650146756755,0,0.141405431953713,1.13008116620243,0,0,0,0,0,0.608731130888112,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0,1.25966373927138,0,0,0.933118762985422,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72844298240254,1.30634944043764,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,2.80660409274515,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50313580350515,0,0.228840068396924,0.756154618816195,0,0.295710299979268,0.159296767163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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5999 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10000 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-356bp_to_AL137433_5end | |||
|description=CAGE_peak_9_at_RGS4_5end | |||
|id=chr1:163045698..163045709,+ | |||
|ontology_enrichment_celltype=CL:0002334!6.02e-07!12;CL:0000359!6.75e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002591;9.12e-14;1!CL:0002593;1.59e-07;2!CL:0002535;1.59e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,1.10e-13,1;CL:0002535,1.54e-07,2;CL:0002593,2.12e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!9.95e-16!14;DOID:193!1.61e-10!29;DOID:120!7.77e-10!27 | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.64e-17;3!DOID:127;1.64e-17;3!DOID:0060072;2.21e-13;4!DOID:2394;1.16e-08;14!DOID:120;1.14e-07;27!DOID:193;3.75e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,9.94e-18,3;DOID:127,9.94e-18,3;DOID:0060072,1.52e-13,4;DOID:2394,8.60e-09,14;DOID:120,9.24e-08,27;DOID:193,3.08e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0000200!2.12e-11!6;UBERON:0001950!1.86e-10!20;UBERON:0002118!2.26e-10!5;UBERON:0004532!2.26e-10!5;UBERON:0002619!2.64e-09!22;UBERON:0001869!4.24e-09!32;UBERON:0001637!8.81e-09!42;UBERON:0003509!8.81e-09!42;UBERON:0004572!8.81e-09!42;UBERON:0000992!9.53e-09!13;UBERON:0001871!1.35e-08!7;UBERON:0001893!2.24e-08!34;UBERON:0002020!2.51e-08!34;UBERON:0003528!2.51e-08!34;UBERON:0000956!6.45e-08!25;UBERON:0000203!6.45e-08!25;UBERON:0002791!1.72e-07!33;UBERON:0002771!9.10e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003134;1.01e-08;33!UBERON:0000474;4.06e-08;37!UBERON:0002771;9.54e-08;2!UBERON:0000078;1.59e-07;2!UBERON:0006955;1.59e-07;2!UBERON:0004801;1.59e-07;2!UBERON:0002012;1.59e-07;2!UBERON:0002456;1.59e-07;2!UBERON:0008886;1.59e-07;2!UBERON:0000995;3.80e-07;17!UBERON:0003975;8.92e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003134,1.75e-08,37;UBERON:0000474,1.75e-08,37;UBERON:0002771,9.25e-08,2;UBERON:0003100,1.21e-07,41;UBERON:0006955,1.54e-07,2;UBERON:0004801,1.54e-07,2;UBERON:0000078,1.75e-07,2;UBERON:0007497,1.75e-07,2;UBERON:0003643,1.75e-07,2;UBERON:0003504,1.75e-07,2;UBERON:0003469,1.75e-07,2;UBERON:0003496,1.75e-07,2;UBERON:0002012,1.75e-07,2;UBERON:0008886,1.75e-07,2;UBERON:0007303,1.75e-07,2;UBERON:0002061,1.75e-07,2;UBERON:0005432,1.75e-07,2;UBERON:0004363,1.75e-07,2;UBERON:0002456,2.12e-07,2 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443458794925128,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0.506522046658319,0.529636723252875,0,0,0,1.06748995729705,0.49333509683432,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,1.09970290300263,0,0,0,1.19812427745791,0,0,0.144781306667579,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.207970861530807,0.178428988797162,0,0.35142424497814,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0,0,0.128139149255701,0.511707249066704,0.64341568457443,0,0.308419387605311,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,1.39453664789186,0.62962469366128,0,0.616067160352178,0,0,0.37064843820784,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.974853958525138,1.05650146756755,0,0.141405431953713,1.13008116620243,0,0,0,0,0,0.608731130888112,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0,1.25966373927138,0,0,0.933118762985422,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72844298240254,1.30634944043764,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,2.80660409274515,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50313580350515,0,0.228840068396924,0.756154618816195,0,0.295710299979268,0.159296767163702,0,0.155262956876259,2.07353103920428,0.797525143673985,0,0.300515217994437,1.90402606084398,0.406870733204662,0.181848659202559,0.429642228169954,0.464033759878494,1.99047944349308,0,0,0,0,0,0,0,0.226705925512272,0.694567422971502,0,0.179088841081487,0,0,0.353378291891762,0.771656153083659,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@RGS4 | |||
}} |
Revision as of 01:28, 12 September 2013
Short description: | p9@RGS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_RGS4_5end |
Coexpression cluster: | NA |
Association with transcript: | -356bp_to_AL137433_5end |
EntrezGene: | RGS4 |
HGNC: | 10000 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 1.10e-13 | 1 |
epithelial cell of cervix | 1.54e-07 | 2 |
smooth muscle cell of the internal thoracic artery | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
female reproductive organ | 1.75e-08 | 37 |
female reproductive system | 1.75e-08 | 37 |
middle temporal gyrus | 9.25e-08 | 2 |
female organism | 1.21e-07 | 41 |
uterine epithelium | 1.54e-07 | 2 |
cervix epithelium | 1.54e-07 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 1.75e-07 | 2 |
developing epithelial placode | 1.75e-07 | 2 |
respiratory system arterial blood vessel | 1.75e-07 | 2 |
respiratory system blood vessel | 1.75e-07 | 2 |
respiratory system artery | 1.75e-07 | 2 |
head blood vessel | 1.75e-07 | 2 |
pulmonary artery | 1.75e-07 | 2 |
pulmonary vascular system | 1.75e-07 | 2 |
pharyngeal vasculature | 1.75e-07 | 2 |
truncus arteriosus | 1.75e-07 | 2 |
aortic sac | 1.75e-07 | 2 |
pharyngeal arch artery | 1.75e-07 | 2 |
internal thoracic artery | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 9.94e-18 | 3 |
leiomyoma | 9.94e-18 | 3 |
benign neoplasm | 1.52e-13 | 4 |
ovarian cancer | 8.60e-09 | 14 |
female reproductive organ cancer | 9.24e-08 | 27 |
reproductive organ cancer | 3.08e-07 | 29 |
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