FFCP PHASE1:Hg19::chr1:183208540..183208573,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C268|description=CAGE_peak_at_chr1:183208540..183208573,-|id=chr1:183208540..183208573,-|ontology_enrichment_celltype=CL:0002076!6.88e-28!43;CL:0000066!5.58e-23!254;CL:0000223!1.36e-18!59;CL:0002251!2.51e-16!21;CL:0002621!9.97e-10!3;CL:0002368!1.27e-09!13;CL:0000220!2.18e-09!246;CL:0002321!3.12e-09!248;CL:0002231!4.66e-09!3;CL:0002327!2.13e-07!4;CL:0000244!2.69e-07!4;CL:0000731!2.69e-07!4;CL:0002536!7.67e-07!2|ontology_enrichment_celltype_v019=CL:0000240;1.98e-20;6!CL:0000311;1.98e-20;6!CL:0000079;1.98e-20;6!CL:0000237;1.98e-20;6!CL:0002621;9.49e-19;3!CL:0002166;1.14e-18;3!CL:0002159;1.71e-15;14!CL:0002076;1.77e-14;42!CL:0002336;2.41e-14;1!CL:0002261;2.41e-14;1!CL:0002252;2.41e-14;1!CL:0002170;2.41e-14;1!CL:0000312;1.21e-11;5!CL:0002251;8.08e-11;20!CL:0000362;7.42e-07;9|ontology_enrichment_celltype_v019_2=CL:0000240,1.74e-20,6;CL:0000311,1.74e-20,6;CL:0000079,1.74e-20,6;CL:0000237,1.74e-20,6;CL:0000036,1.74e-20,6;CL:0000357,1.74e-20,6;CL:0000114,1.74e-20,6;CL:0002166,9.50e-19,3;CL:0002621,1.24e-18,3;CL:0002159,1.53e-15,14;CL:0002076,6.99e-15,42;CL:0002336,2.11e-14,1;CL:0002261,2.11e-14,1;CL:0002170,2.11e-14,1;CL:0002252,3.15e-14,1;CL:0000312,1.15e-11,5;CL:0002251,8.96e-11,20;CL:0000223,1.24e-10,58;CL:0000066,3.03e-10,253;CL:0000362,7.21e-07,9|ontology_enrichment_development_v019=CL:0000357;1.98e-20;6!CL:0000114;1.98e-20;6!CL:0000223;2.93e-07;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!2.91e-11!169;UBERON:0000925!2.91e-11!169;UBERON:0006595!2.91e-11!169;UBERON:0001949!9.97e-10!3;UBERON:0003729!8.06e-09!5;UBERON:0001004!8.47e-09!72;UBERON:0005910!9.83e-08!6;UBERON:0001911!2.13e-07!4;UBERON:0005333!2.13e-07!4;UBERON:0008425!2.13e-07!4;UBERON:0005311!2.13e-07!4;UBERON:0000161!3.37e-07!35;UBERON:0000166!4.55e-07!21|ontology_enrichment_uberon_v019=UBERON:0001949;9.49e-19;3!UBERON:0001708;2.95e-14;4!UBERON:0008895;2.95e-14;4!UBERON:0011159;1.35e-11;5!UBERON:0000486;1.06e-10;12!UBERON:0003729;9.19e-10;13!UBERON:0003929;1.42e-08;7!UBERON:0003350;1.31e-07;8!UBERON:0001828;1.31e-07;8!UBERON:0010371;4.33e-07;31|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.24e-18,3;UBERON:0001708,2.58e-14,4;UBERON:0008895,2.58e-14,4;UBERON:0011159,1.21e-11,5;UBERON:0010188,7.42e-10,6;UBERON:0002539,7.42e-10,6;UBERON:0008816,7.42e-10,6;UBERON:0003729,9.76e-10,13;UBERON:0003102,8.23e-08,99;UBERON:0003350,1.45e-07,8;UBERON:0001828,1.45e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0.873765488520689,0.527533956456907,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12586938479627,2.45471508531751,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,2.19500570817251,0,2.91534019993729,1.66659201285353,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,4.70349958956807,1.84307626415102,5.82130397568514,0.871901815541886,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,2.20557117333613,0.736647911487171,0,0,0,0,0.847168708148562,0,0,0.633309773357254,0,0,0,0,0,0,0.509752546090077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,2.64455864577565,2.69066094311149,0.255225424989168,0.50578890427775,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0.86101074534246,0,0.443430153536676,9.87810620889926,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0.77380195455795,0,0,0,0,0.316801009558219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0.228840068396924,0,0.15543720058278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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C268 | |||
|description=CAGE_peak_at_chr1:183208540..183208573,- | |||
|id=chr1:183208540..183208573,- | |||
|ontology_enrichment_celltype=CL:0002076!6.88e-28!43;CL:0000066!5.58e-23!254;CL:0000223!1.36e-18!59;CL:0002251!2.51e-16!21;CL:0002621!9.97e-10!3;CL:0002368!1.27e-09!13;CL:0000220!2.18e-09!246;CL:0002321!3.12e-09!248;CL:0002231!4.66e-09!3;CL:0002327!2.13e-07!4;CL:0000244!2.69e-07!4;CL:0000731!2.69e-07!4;CL:0002536!7.67e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000240;1.98e-20;6!CL:0000311;1.98e-20;6!CL:0000079;1.98e-20;6!CL:0000237;1.98e-20;6!CL:0002621;9.49e-19;3!CL:0002166;1.14e-18;3!CL:0002159;1.71e-15;14!CL:0002076;1.77e-14;42!CL:0002336;2.41e-14;1!CL:0002261;2.41e-14;1!CL:0002252;2.41e-14;1!CL:0002170;2.41e-14;1!CL:0000312;1.21e-11;5!CL:0002251;8.08e-11;20!CL:0000362;7.42e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000240,1.74e-20,6;CL:0000311,1.74e-20,6;CL:0000079,1.74e-20,6;CL:0000237,1.74e-20,6;CL:0000036,1.74e-20,6;CL:0000357,1.74e-20,6;CL:0000114,1.74e-20,6;CL:0002166,9.50e-19,3;CL:0002621,1.24e-18,3;CL:0002159,1.53e-15,14;CL:0002076,6.99e-15,42;CL:0002336,2.11e-14,1;CL:0002261,2.11e-14,1;CL:0002170,2.11e-14,1;CL:0002252,3.15e-14,1;CL:0000312,1.15e-11,5;CL:0002251,8.96e-11,20;CL:0000223,1.24e-10,58;CL:0000066,3.03e-10,253;CL:0000362,7.21e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000357;1.98e-20;6!CL:0000114;1.98e-20;6!CL:0000223;2.93e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.91e-11!169;UBERON:0000925!2.91e-11!169;UBERON:0006595!2.91e-11!169;UBERON:0001949!9.97e-10!3;UBERON:0003729!8.06e-09!5;UBERON:0001004!8.47e-09!72;UBERON:0005910!9.83e-08!6;UBERON:0001911!2.13e-07!4;UBERON:0005333!2.13e-07!4;UBERON:0008425!2.13e-07!4;UBERON:0005311!2.13e-07!4;UBERON:0000161!3.37e-07!35;UBERON:0000166!4.55e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;9.49e-19;3!UBERON:0001708;2.95e-14;4!UBERON:0008895;2.95e-14;4!UBERON:0011159;1.35e-11;5!UBERON:0000486;1.06e-10;12!UBERON:0003729;9.19e-10;13!UBERON:0003929;1.42e-08;7!UBERON:0003350;1.31e-07;8!UBERON:0001828;1.31e-07;8!UBERON:0010371;4.33e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.24e-18,3;UBERON:0001708,2.58e-14,4;UBERON:0008895,2.58e-14,4;UBERON:0011159,1.21e-11,5;UBERON:0010188,7.42e-10,6;UBERON:0002539,7.42e-10,6;UBERON:0008816,7.42e-10,6;UBERON:0003729,9.76e-10,13;UBERON:0003102,8.23e-08,99;UBERON:0003350,1.45e-07,8;UBERON:0001828,1.45e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0.873765488520689,0.527533956456907,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12586938479627,2.45471508531751,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,2.19500570817251,0,2.91534019993729,1.66659201285353,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,4.70349958956807,1.84307626415102,5.82130397568514,0.871901815541886,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,2.20557117333613,0.736647911487171,0,0,0,0,0.847168708148562,0,0,0.633309773357254,0,0,0,0,0,0,0.509752546090077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,2.64455864577565,2.69066094311149,0.255225424989168,0.50578890427775,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0.86101074534246,0,0.443430153536676,9.87810620889926,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0.77380195455795,0,0,0,0,0.316801009558219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0.228840068396924,0,0.15543720058278,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0.559518030877778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.183428598521679,0.346576998451015,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0.414432328326074,0.17071847709395,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0.332660356546013,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:183208540..183208573,- | |||
}} |
Revision as of 02:11, 12 September 2013
Short description: | p@chr1:183208540..183208573, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:183208540..183208573, - |
Coexpression cluster: | C268_Mallassezderived_Urothelial_Gingival_Small_Bronchial_Tracheal_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelial cell | 1.74e-20 | 6 |
keratin accumulating cell | 1.74e-20 | 6 |
stratified epithelial cell | 1.74e-20 | 6 |
keratinizing barrier epithelial cell | 1.74e-20 | 6 |
epithelial fate stem cell | 1.74e-20 | 6 |
stratified epithelial stem cell | 1.74e-20 | 6 |
surface ectodermal cell | 1.74e-20 | 6 |
epithelial cell of Malassez | 9.50e-19 | 3 |
gingival epithelial cell | 1.24e-18 | 3 |
general ecto-epithelial cell | 1.53e-15 | 14 |
endo-epithelial cell | 6.99e-15 | 42 |
buccal mucosa cell | 2.11e-14 | 1 |
endothelial cell of viscerocranial mucosa | 2.11e-14 | 1 |
keratinized cell of the oral mucosa | 2.11e-14 | 1 |
epithelial cell of esophagus | 3.15e-14 | 1 |
keratinocyte | 1.15e-11 | 5 |
epithelial cell of alimentary canal | 8.96e-11 | 20 |
endodermal cell | 1.24e-10 | 58 |
epithelial cell | 3.03e-10 | 253 |
epidermal cell | 7.21e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 1.24e-18 | 3 |
jaw skeleton | 2.58e-14 | 4 |
splanchnocranium | 2.58e-14 | 4 |
primary subdivision of cranial skeletal system | 1.21e-11 | 5 |
protuberance | 7.42e-10 | 6 |
pharyngeal arch | 7.42e-10 | 6 |
embryonic head | 7.42e-10 | 6 |
mouth mucosa | 9.76e-10 | 13 |
surface structure | 8.23e-08 | 99 |
epithelium of mucosa | 1.45e-07 | 8 |
gingiva | 1.45e-07 | 8 |
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