FFCP PHASE1:Hg19::chr1:214776602..214776615,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1063|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1857|TSSclassifier=S|UniProt=|association_with_transcript=64bp_to_ENST00000366955,ENST00000464322_5end|coexpression_cluster_id=C109|description=CAGE_peak_3_at_CENPF_5end|id=chr1:214776602..214776615,+|ontology_enrichment_celltype=CL:0000012!3.29e-10!682;CL:0002319!6.76e-10!25;CL:0000548!7.58e-10!679;CL:0000004!7.58e-10!679;CL:0000255!7.58e-10!679;CL:0000066!2.74e-08!254;CL:0000095!2.91e-08!17;CL:0000123!2.91e-08!17;CL:0000133!1.81e-07!59;CL:0000333!2.23e-07!41;CL:0000243!3.46e-07!15;CL:0000125!3.46e-07!15;CL:0000030!3.46e-07!15;CL:0000339!3.46e-07!15|ontology_enrichment_celltype_v019=CL:0002319;1.32e-10;25!CL:0000095;1.48e-08;17!CL:0000243;2.50e-07;15!CL:0000125;2.50e-07;15!CL:0002321;9.55e-07;15|ontology_enrichment_celltype_v019_2=CL:0002319,1.74e-10,25;CL:0000095,1.44e-08,17;CL:0000123,1.44e-08,17;CL:0000133,2.53e-08,59;CL:0000333,7.75e-08,41;CL:0000243,2.34e-07,15;CL:0000125,2.34e-07,15;CL:0000030,2.34e-07,15;CL:0000339,2.34e-07,15|ontology_enrichment_development_v019=CL:0000339;2.50e-07;15|ontology_enrichment_disease=DOID:162!1.86e-54!235;DOID:14566!1.18e-53!239;DOID:0050687!5.51e-29!143;DOID:0050686!3.47e-24!137;DOID:305!7.30e-21!106;DOID:2531!8.45e-15!51;DOID:0060083!8.45e-15!51;DOID:1240!2.27e-11!39;DOID:8692!6.60e-08!31;DOID:3095!5.80e-07!22;DOID:2994!5.80e-07!22|ontology_enrichment_disease_v019=DOID:2531;2.25e-10;51!DOID:0060083;2.25e-10;51!DOID:1240;2.37e-10;39!DOID:8692;1.21e-08;31!DOID:0050687;3.17e-07;143!DOID:3095;3.44e-07;22!DOID:2994;3.44e-07;22!DOID:1115;3.66e-07;20!DOID:14566;7.03e-07;239|ontology_enrichment_disease_v019_2=DOID:162,2.20e-52,235;DOID:14566,9.14e-52,239;DOID:0050687,1.39e-26,143;DOID:0050686,2.93e-22,137;DOID:305,4.46e-18,106;DOID:2531,1.66e-16,51;DOID:0060083,1.66e-16,51;DOID:1240,4.73e-13,39;DOID:8692,4.74e-09,31;DOID:3095,2.59e-07,22;DOID:2994,2.59e-07,22;DOID:1115,5.49e-07,20|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0.697801167972428,1.09220686065086,0.263766978228454,0.618831764800233,0.662794751455832,0,0,0,0,2.09305798730539,0.612002073732759,0.313454721478088,9.73202356245593,6.98059567871709,5.64941878176613,4.81404456212093,4.92603536699674,5.66717625458491,0.393364276848904,0.767658796194425,0.309632246632152,0.919421224478927,0.90361775633475,0,12.9370224969104,8.81449241422014,1.46800219667424,0,0.200544447470142,0.217010870715852,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0,0,0.434377689410233,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,1.75996244461323,0,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,1.32171328579026,1.12101712596307,1.84368859342554,0.983548850569165,1.57204305099666,0.616804496998528,0.83593247695339,0,0,1.94826728407911,1.89397776704795,0,0.664601683750863,2.16643091012012,1.5370958367081,1.56071217071854,1.47994114143309,1.93445012450094,4.63684937176084,0.14828656316206,0.267540828089713,0,5.66546713487831,1.91610246800961,1.71813722741315,0.759059076058509,0,0,0,0.150575119077773,0.127986611154418,0,0,0,2.01606743224732,2.40696176205157,0.868946423296794,0,0.670700859703636,0.255725123687061,5.06014813338393,0,0,1.5905718941022,0.973269740605272,8.31906391043797,1.55210578223795,2.19586964232815,0.392937226493138,0,0,0,0,0,0,0,0,1.19257444420023,0.860234595106124,0.347140501607594,0,0,1.37559020970034,0.208994966536811,0.258416759169329,0.71153252537342,1.00416183829401,1.20848795132744,2.28081631715554,0.488124115096339,3.30896772311282,0,4.19708722935175,2.46982309888787,2.36484109014977,0,0,0.732806975721629,0,0,0,0,2.40597972162702,0,6.59724227722272,2.12801029319014,0,0,0.49333509683432,2.17847724779836,1.0776853765575,1.79808093424805,0.302714855289863,0,0.70296429550139,0.312160076830321,0.570471821544449,0.448346041655403,2.81842796745036,3.56120477609889,3.93262258766296,1.63323337003915,3.56219520204127,0.826606249406124,1.18800285728205,0.741800787835671,0,0,7.57512512793298,4.12891115577482,6.09541054065202,3.95079858792754,0.612975591598039,0.600952235626387,1.36118619792025,18.1183532045751,0.213557388818567,0.635795703478686,5.40163972951924,1.75189299705346,1.8034837803194,0.558350568994769,19.2405018755043,4.18979122193154,8.33031455005578,0.736399189138395,0.646584227275248,9.58525899794859,6.44813428656898,1.86516651541536,0.57978255948989,0.818238361772504,0.860413786167011,3.65921118388786,4.77107165957347,3.02104251460748,2.07322110030741,3.28017106138317,5.83963774521328,0,0.643240938192885,0,0,0,5.08719240171329,5.05754070234305,5.54325368732009,2.97793726377464,5.44698610231015,5.69449485866632,4.71909578560575,5.69042248863504,5.38646019724947,0,1.40241773803446,0,0,0,0,0,3.97316789473185,2.33678033231916,1.20097467208968,0.439001141634502,0,0.904760751704678,0.462942225792648,0.325808305310325,1.03993478527958,1.4433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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1063 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1857 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=64bp_to_ENST00000366955,ENST00000464322_5end | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_3_at_CENPF_5end | |||
|id=chr1:214776602..214776615,+ | |||
|ontology_enrichment_celltype=CL:0000012!3.29e-10!682;CL:0002319!6.76e-10!25;CL:0000548!7.58e-10!679;CL:0000004!7.58e-10!679;CL:0000255!7.58e-10!679;CL:0000066!2.74e-08!254;CL:0000095!2.91e-08!17;CL:0000123!2.91e-08!17;CL:0000133!1.81e-07!59;CL:0000333!2.23e-07!41;CL:0000243!3.46e-07!15;CL:0000125!3.46e-07!15;CL:0000030!3.46e-07!15;CL:0000339!3.46e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.32e-10;25!CL:0000095;1.48e-08;17!CL:0000243;2.50e-07;15!CL:0000125;2.50e-07;15!CL:0002321;9.55e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.74e-10,25;CL:0000095,1.44e-08,17;CL:0000123,1.44e-08,17;CL:0000133,2.53e-08,59;CL:0000333,7.75e-08,41;CL:0000243,2.34e-07,15;CL:0000125,2.34e-07,15;CL:0000030,2.34e-07,15;CL:0000339,2.34e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000339;2.50e-07;15 | |||
|ontology_enrichment_disease=DOID:162!1.86e-54!235;DOID:14566!1.18e-53!239;DOID:0050687!5.51e-29!143;DOID:0050686!3.47e-24!137;DOID:305!7.30e-21!106;DOID:2531!8.45e-15!51;DOID:0060083!8.45e-15!51;DOID:1240!2.27e-11!39;DOID:8692!6.60e-08!31;DOID:3095!5.80e-07!22;DOID:2994!5.80e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:2531;2.25e-10;51!DOID:0060083;2.25e-10;51!DOID:1240;2.37e-10;39!DOID:8692;1.21e-08;31!DOID:0050687;3.17e-07;143!DOID:3095;3.44e-07;22!DOID:2994;3.44e-07;22!DOID:1115;3.66e-07;20!DOID:14566;7.03e-07;239 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.20e-52,235;DOID:14566,9.14e-52,239;DOID:0050687,1.39e-26,143;DOID:0050686,2.93e-22,137;DOID:305,4.46e-18,106;DOID:2531,1.66e-16,51;DOID:0060083,1.66e-16,51;DOID:1240,4.73e-13,39;DOID:8692,4.74e-09,31;DOID:3095,2.59e-07,22;DOID:2994,2.59e-07,22;DOID:1115,5.49e-07,20 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p3@CENPF | |||
}} |
Revision as of 03:35, 12 September 2013
Short description: | p3@CENPF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CENPF_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 64bp_to_ENST00000366955, ENST00000464322_5end |
EntrezGene: | CENPF |
HGNC: | 1857 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.74e-10 | 25 |
neuron associated cell | 1.44e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 1.44e-08 | 17 |
neurectodermal cell | 2.53e-08 | 59 |
migratory neural crest cell | 7.75e-08 | 41 |
glial cell (sensu Vertebrata) | 2.34e-07 | 15 |
glial cell | 2.34e-07 | 15 |
glioblast | 2.34e-07 | 15 |
glioblast (sensu Vertebrata) | 2.34e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.20e-52 | 235 |
disease of cellular proliferation | 9.14e-52 | 239 |
cell type cancer | 1.39e-26 | 143 |
organ system cancer | 2.93e-22 | 137 |
carcinoma | 4.46e-18 | 106 |
hematologic cancer | 1.66e-16 | 51 |
immune system cancer | 1.66e-16 | 51 |
leukemia | 4.73e-13 | 39 |
myeloid leukemia | 4.74e-09 | 31 |
germ cell and embryonal cancer | 2.59e-07 | 22 |
germ cell cancer | 2.59e-07 | 22 |
sarcoma | 5.49e-07 | 20 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.