FFCP PHASE1:Hg19::chr1:36235546..36235557,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=63967|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19715|TSSclassifier=S|UniProt=F5H7R3,Q9HAW4|association_with_transcript=0bp_to_ENST00000544356,NM_001190481,NM_022111,uc001bzi.2,uc009vux.2_5end|coexpression_cluster_id=C109|description=CAGE_peak_2_at_CLSPN_5end|id=chr1:36235546..36235557,-|ontology_enrichment_celltype=CL:0000548!1.27e-09!679;CL:0000004!1.27e-09!679;CL:0000255!1.27e-09!679;CL:0000012!2.06e-09!682;CL:0000066!3.93e-08!254|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:162!5.56e-49!235;DOID:14566!4.30e-48!239;DOID:0050687!1.06e-25!143;DOID:0050686!2.67e-23!137;DOID:305!9.53e-21!106;DOID:2531!2.38e-18!51;DOID:0060083!2.38e-18!51;DOID:1240!4.39e-16!39;DOID:8692!1.40e-11!31|ontology_enrichment_disease_v019=DOID:1240;5.77e-15;39!DOID:2531;2.78e-14;51!DOID:0060083;2.78e-14;51!DOID:8692;1.50e-11;31!DOID:1115;1.26e-07;20|ontology_enrichment_disease_v019_2=DOID:162,6.68e-42,235;DOID:14566,2.66e-40,239;DOID:0050686,1.17e-22,137;DOID:2531,1.90e-22,51;DOID:0060083,1.90e-22,51;DOID:1240,1.88e-19,39;DOID:0050687,6.54e-19,143;DOID:305,2.56e-15,106;DOID:8692,5.81e-12,31;DOID:1115,7.98e-08,20|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0.697801167972428,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0.738726348460727,0.408001382488506,0,0,1.09499540058307,1.38096903554283,0.840547463227464,1.14940825229924,1.57421562627358,0,0.383829398097213,0.154816123316076,0,0,0,3.71842562785448,0.568676929949686,0.587200878669695,0.553995408531877,0,0,0.223915474239924,0,0,0,0,0,0.232429036905685,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0.199463657621632,0,0,0,0,0,0.521482918420201,0,0,0.368277635987565,0,0,0,0,0,0,0.16072558669708,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.526768169550154,0.196709770113833,0,0.616804496998528,0,0,0,0,0.222820913770347,0,0,0,0.384273959177026,0.130059347559878,0.164437904603676,0.552700035571697,0.579606171470105,0,0,0,0.793165398882963,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,1.60464117470104,0.289648807765598,0,0,0.12786256184353,0.722878304769133,0,0.144846518960824,0,0,0.756278537312543,0.665188192387692,0.087834785693126,0.130979075497713,0.364295288292542,0.370784442784429,0,0,0.132957960518865,0,0,0,0.39752481473341,0,0.347140501607594,0,0,0.550236083880135,0.417989933073621,0.258416759169329,0,0,0,0,0.24406205754817,1.10298924103761,0,0.535798369704479,0.673588117878509,0.900891843866578,0,0,0,0,0,0,0,0.886413581652058,0,0,1.06400514659507,1.12135520028461,0,0,0,0.404132016209064,0.817309515567294,0.302714855289863,0,0.234321431833797,0,1.1409436430889,0.149448680551801,0.352303495931295,0.971237666208789,2.10676210053373,0,0.491337269247072,0.206651562351531,0,0.247266929278557,0,0,1.34668891163253,1.62654075833553,0,0.438977620880838,0.30648779579902,0.150238058906597,0.794025282120147,1.97328599257748,0.213557388818567,0.423863802319124,1.20036438433761,0.515262646192195,0.257640540045629,0.18611685633159,1.18143432568886,0.487185025805993,0.504867548488229,0.0920498986422993,0,1.06502877754984,0.705264687593482,0.508681776931463,0,0.272746120590835,1.14721838155602,0.731842236777572,1.32529768321485,0.69716365721711,0.829288440122964,1.26160425437814,0.72995471815166,0,0.643240938192885,1.38134921352481,0,0,0.828147600278907,0.674338760312407,1.92808823906786,1.8749975364507,1.30727666455444,3.08451804844426,0.943819157121151,1.76599318612811,3.46272441251751,0,0,0,0,0,0,0,2.6487785964879,0.983907508344908,0.171567810298526,0.219500570817251,0,0.703702806881416,0,0,1.03993478527958,0,0.231860809950154,0.117408694235822,0.144366447761074,0,0.570762456703795,0,0,0.246217006087397,0,0.891786973732369,0,0.335964256397719,0.425325291727159,0.626909658919938,0.581267877027924,0,0.492663237895943,0.264145302039678,0.621984346622316,0,0.12624243342638,2.60341366597893,0,0,0,1.43958489784653,0.600686115687835,0.285826432630578,1.12131084345361,0.87192013766656,1.1734125731352,0,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0.65147236858747,0.355391948742546,0.791951872933429,0,0,0.299918973546171,0,0,0,0.479249710983165,0,0,0.579125226670317,0.410952645100767,1.96967059563885,2.12961773587702,0.394061520403854,0.215627574859517,0.256686072559497,0.508189248444927,0,0,0.335032530668698,0,0,0,0,0,0.500170521059677,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0.664225598535437,0,0.347534457872331,0,0.343143423810856,0.206768026122887,0,0,0.303127571446259,0,0,0,0.306923946576125,0.280660094433074,0,0,0,0,1.07946785661859,0,0.410635780069046,0,0.813472649219715,0.725156697549733,0,0,0.68888668898764,1.63882051206045,0,0.451199612907412,0.308061348417659,0,1.46139224653261,0.211103257785751,0,0.680374821106063,1.94324324491925,0,0,0,0.254876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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=63967 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19715 | |||
|TSSclassifier=S | |||
|UniProt=F5H7R3,Q9HAW4 | |||
|association_with_transcript=0bp_to_ENST00000544356,NM_001190481,NM_022111,uc001bzi.2,uc009vux.2_5end | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_2_at_CLSPN_5end | |||
|id=chr1:36235546..36235557,- | |||
|ontology_enrichment_celltype=CL:0000548!1.27e-09!679;CL:0000004!1.27e-09!679;CL:0000255!1.27e-09!679;CL:0000012!2.06e-09!682;CL:0000066!3.93e-08!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!5.56e-49!235;DOID:14566!4.30e-48!239;DOID:0050687!1.06e-25!143;DOID:0050686!2.67e-23!137;DOID:305!9.53e-21!106;DOID:2531!2.38e-18!51;DOID:0060083!2.38e-18!51;DOID:1240!4.39e-16!39;DOID:8692!1.40e-11!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;5.77e-15;39!DOID:2531;2.78e-14;51!DOID:0060083;2.78e-14;51!DOID:8692;1.50e-11;31!DOID:1115;1.26e-07;20 | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.68e-42,235;DOID:14566,2.66e-40,239;DOID:0050686,1.17e-22,137;DOID:2531,1.90e-22,51;DOID:0060083,1.90e-22,51;DOID:1240,1.88e-19,39;DOID:0050687,6.54e-19,143;DOID:305,2.56e-15,106;DOID:8692,5.81e-12,31;DOID:1115,7.98e-08,20 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p2@CLSPN | |||
}} |
Revision as of 05:29, 12 September 2013
Short description: | p2@CLSPN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CLSPN_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000544356, NM_001190481, NM_022111, uc001bzi.2, uc009vux.2_5end |
EntrezGene: | CLSPN |
HGNC: | 19715 |
UniProt: | F5H7R3Q9HAW4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cancer | 6.68e-42 | 235 |
disease of cellular proliferation | 2.66e-40 | 239 |
organ system cancer | 1.17e-22 | 137 |
hematologic cancer | 1.90e-22 | 51 |
immune system cancer | 1.90e-22 | 51 |
leukemia | 1.88e-19 | 39 |
cell type cancer | 6.54e-19 | 143 |
carcinoma | 2.56e-15 | 106 |
myeloid leukemia | 5.81e-12 | 31 |
sarcoma | 7.98e-08 | 20 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.