FFCP PHASE1:Hg19::chr1:93128346..93128356,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C86|description=CAGE_peak_at_chr1:93128346..93128356,-|id=chr1:93128346..93128356,-|ontology_enrichment_celltype=CL:0000167!2.42e-11!1;CL:0000164!2.42e-11!1;CL:0000502!2.42e-11!1;CL:0000172!2.42e-11!1;CL:0000173!2.42e-11!1;CL:0002351!2.42e-11!1;CL:0002557!4.01e-11!1;CL:0002574!4.91e-11!1|ontology_enrichment_celltype_v019=CL:0002253;1.55e-98;2!CL:0002563;3.10e-50;4!CL:0002251;2.29e-11;20|ontology_enrichment_celltype_v019_2=CL:0002253,1.55e-98,2;CL:0002563,3.10e-50,4;CL:0002251,2.29e-11,20|ontology_enrichment_development_v019=UBERON:0003104;4.53e-08;31|ontology_enrichment_disease=DOID:4430!2.42e-11!1;DOID:169!1.57e-07!6|ontology_enrichment_disease_v019=DOID:3119;1.43e-15;14!DOID:299;2.15e-09;25|ontology_enrichment_disease_v019_2=DOID:3119,1.43e-15,14;DOID:299,2.15e-09,25|ontology_enrichment_uberon=UBERON:0010188!2.42e-14!3;UBERON:0002539!2.42e-14!3;UBERON:0008816!2.42e-14!3;UBERON:0002426!9.57e-12!1;UBERON:0003831!9.57e-12!1;UBERON:0003898!9.57e-12!1;UBERON:0004830!9.57e-12!1;UBERON:0001774!9.57e-12!1;UBERON:0003830!9.57e-12!1;UBERON:0005175!9.57e-12!1;UBERON:0003897!9.57e-12!1;UBERON:0001103!9.57e-12!1;UBERON:0010084!9.57e-12!1;UBERON:0001000!1.06e-11!1;UBERON:0005352!1.06e-11!1;UBERON:0005705!1.18e-11!1;UBERON:0008193!1.18e-11!1;UBERON:0002514!1.18e-11!1;UBERON:0003462!1.18e-11!1;UBERON:0008001!1.18e-11!1;UBERON:0007914!1.18e-11!1;UBERON:0003457!1.18e-11!1;UBERON:0009292!1.18e-11!1;UBERON:0007375!1.18e-11!1;UBERON:0003323!1.18e-11!1;UBERON:0002397!1.18e-11!1;UBERON:0001709!1.18e-11!1;UBERON:0004066!1.18e-11!1;UBERON:0002244!1.18e-11!1;UBERON:0005620!1.18e-11!1;UBERON:0004068!1.18e-11!1;UBERON:0004362!1.18e-11!1;UBERON:0002902!6.00e-11!1;UBERON:0009899!6.00e-11!1|ontology_enrichment_uberon_v019=UBERON:0001052;3.10e-50;4!UBERON:0001242;3.10e-50;4!UBERON:0001262;3.10e-50;4!UBERON:0004786;3.10e-50;4!UBERON:0004808;3.10e-50;4!UBERON:0001277;3.10e-50;4!UBERON:0004907;1.48e-40;5!UBERON:0000485;1.78e-29;7!UBERON:0003929;1.78e-29;7!UBERON:0003350;5.22e-26;8!UBERON:0001155;2.62e-23;9!UBERON:0000059;2.25e-19;11!UBERON:0000160;1.85e-12;17!UBERON:0000344;2.29e-11;20!UBERON:0005409;4.42e-10;22!UBERON:0000490;4.53e-08;33!UBERON:0004921;2.32e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0001052,3.10e-50,4;UBERON:0001242,3.10e-50,4;UBERON:0001262,3.10e-50,4;UBERON:0004786,3.10e-50,4;UBERON:0004808,3.10e-50,4;UBERON:0001277,3.10e-50,4;UBERON:0004907,1.48e-40,5;UBERON:0003350,5.22e-26,8;UBERON:0001155,2.62e-23,9;UBERON:0000485,2.62e-23,9;UBERON:0000059,2.25e-19,11;UBERON:0000160,1.85e-12,17;UBERON:0001046,6.95e-12,19;UBERON:0000344,2.29e-11,20;UBERON:0005409,4.34e-09,25|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.2291479806568,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:93128346..93128356,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C86 | |||
|description=CAGE_peak_at_chr1:93128346..93128356,- | |||
|id=chr1:93128346..93128356,- | |||
|ontology_enrichment_celltype=CL:0000167!2.42e-11!1;CL:0000164!2.42e-11!1;CL:0000502!2.42e-11!1;CL:0000172!2.42e-11!1;CL:0000173!2.42e-11!1;CL:0002351!2.42e-11!1;CL:0002557!4.01e-11!1;CL:0002574!4.91e-11!1 | |||
|ontology_enrichment_celltype_v019=CL:0002253;1.55e-98;2!CL:0002563;3.10e-50;4!CL:0002251;2.29e-11;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,1.55e-98,2;CL:0002563,3.10e-50,4;CL:0002251,2.29e-11,20 | |||
|ontology_enrichment_development_v019=UBERON:0003104;4.53e-08;31 | |||
|ontology_enrichment_disease=DOID:4430!2.42e-11!1;DOID:169!1.57e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:3119;1.43e-15;14!DOID:299;2.15e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,1.43e-15,14;DOID:299,2.15e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0010188!2.42e-14!3;UBERON:0002539!2.42e-14!3;UBERON:0008816!2.42e-14!3;UBERON:0002426!9.57e-12!1;UBERON:0003831!9.57e-12!1;UBERON:0003898!9.57e-12!1;UBERON:0004830!9.57e-12!1;UBERON:0001774!9.57e-12!1;UBERON:0003830!9.57e-12!1;UBERON:0005175!9.57e-12!1;UBERON:0003897!9.57e-12!1;UBERON:0001103!9.57e-12!1;UBERON:0010084!9.57e-12!1;UBERON:0001000!1.06e-11!1;UBERON:0005352!1.06e-11!1;UBERON:0005705!1.18e-11!1;UBERON:0008193!1.18e-11!1;UBERON:0002514!1.18e-11!1;UBERON:0003462!1.18e-11!1;UBERON:0008001!1.18e-11!1;UBERON:0007914!1.18e-11!1;UBERON:0003457!1.18e-11!1;UBERON:0009292!1.18e-11!1;UBERON:0007375!1.18e-11!1;UBERON:0003323!1.18e-11!1;UBERON:0002397!1.18e-11!1;UBERON:0001709!1.18e-11!1;UBERON:0004066!1.18e-11!1;UBERON:0002244!1.18e-11!1;UBERON:0005620!1.18e-11!1;UBERON:0004068!1.18e-11!1;UBERON:0004362!1.18e-11!1;UBERON:0002902!6.00e-11!1;UBERON:0009899!6.00e-11!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;3.10e-50;4!UBERON:0001242;3.10e-50;4!UBERON:0001262;3.10e-50;4!UBERON:0004786;3.10e-50;4!UBERON:0004808;3.10e-50;4!UBERON:0001277;3.10e-50;4!UBERON:0004907;1.48e-40;5!UBERON:0000485;1.78e-29;7!UBERON:0003929;1.78e-29;7!UBERON:0003350;5.22e-26;8!UBERON:0001155;2.62e-23;9!UBERON:0000059;2.25e-19;11!UBERON:0000160;1.85e-12;17!UBERON:0000344;2.29e-11;20!UBERON:0005409;4.42e-10;22!UBERON:0000490;4.53e-08;33!UBERON:0004921;2.32e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,3.10e-50,4;UBERON:0001242,3.10e-50,4;UBERON:0001262,3.10e-50,4;UBERON:0004786,3.10e-50,4;UBERON:0004808,3.10e-50,4;UBERON:0001277,3.10e-50,4;UBERON:0004907,1.48e-40,5;UBERON:0003350,5.22e-26,8;UBERON:0001155,2.62e-23,9;UBERON:0000485,2.62e-23,9;UBERON:0000059,2.25e-19,11;UBERON:0000160,1.85e-12,17;UBERON:0001046,6.95e-12,19;UBERON:0000344,2.29e-11,20;UBERON:0005409,4.34e-09,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.2291479806568,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:93128346..93128356,- | |||
}} |
Revision as of 07:13, 12 September 2013
Short description: | p@chr1:93128346..93128356, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:93128346..93128356, - |
Coexpression cluster: | C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 1.55e-98 | 2 |
intestinal epithelial cell | 3.10e-50 | 4 |
epithelial cell of alimentary canal | 2.29e-11 | 20 |
Ontology term | p-value | n |
---|---|---|
rectum | 3.10e-50 | 4 |
intestinal mucosa | 3.10e-50 | 4 |
wall of intestine | 3.10e-50 | 4 |
gastrointestinal system mucosa | 3.10e-50 | 4 |
gastrointestinal system epithelium | 3.10e-50 | 4 |
intestinal epithelium | 3.10e-50 | 4 |
lower digestive tract | 1.48e-40 | 5 |
epithelium of mucosa | 5.22e-26 | 8 |
colon | 2.62e-23 | 9 |
simple columnar epithelium | 2.62e-23 | 9 |
large intestine | 2.25e-19 | 11 |
intestine | 1.85e-12 | 17 |
hindgut | 6.95e-12 | 19 |
mucosa | 2.29e-11 | 20 |
gastrointestinal system | 4.34e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.43e-15 | 14 |
adenocarcinoma | 2.15e-09 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.