FFCP PHASE1:Hg19::chr20:21687193..21687206,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5075|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8615|TSSclassifier=S|UniProt=P15863|association_with_transcript=118bp_to_BC069134_5end|coexpression_cluster_id=C1479|description=CAGE_peak_4_at_PAX1_5end|id=chr20:21687193..21687206,+|ontology_enrichment_celltype=CL:0002564!1.60e-27!3;CL:0002602!3.13e-19!2|ontology_enrichment_celltype_v019=CL:0002564;3.49e-84;3!CL:0002602;1.13e-57;2|ontology_enrichment_celltype_v019_2=CL:0002564,3.03e-84,3;CL:0002602,1.13e-57,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002242!1.60e-27!3;UBERON:0003068!1.60e-27!3;UBERON:0002328!1.60e-27!3;UBERON:0004880!1.60e-27!3;UBERON:0009568!3.13e-19!2;UBERON:0002216!3.13e-19!2;UBERON:0002209!3.13e-19!2;UBERON:0002213!3.13e-19!2;UBERON:0004267!3.13e-19!2;UBERON:0006444!3.13e-19!2;UBERON:0001995!3.13e-19!2;UBERON:0004715!3.13e-19!2;UBERON:0001468!3.13e-19!2;UBERON:0001130!3.13e-19!2;UBERON:0001066!3.13e-19!2;UBERON:0000341!2.04e-18!2;UBERON:0000974!3.06e-14!10;UBERON:0002418!3.85e-13!3;UBERON:0004755!3.85e-13!3;UBERON:0002372!1.98e-10!1;UBERON:0001961!1.98e-10!1;UBERON:0001744!1.98e-10!1;UBERON:0001735!1.98e-10!1;UBERON:0007029!3.40e-10!1;UBERON:0002370!9.42e-10!4;UBERON:0005058!9.42e-10!4;UBERON:0009113!9.42e-10!4;UBERON:0003295!9.42e-10!4;UBERON:0005562!9.42e-10!4;UBERON:0001042!1.48e-08!10;UBERON:0009145!1.48e-08!10;UBERON:0004905!3.13e-08!5;UBERON:0005174!3.13e-08!5;UBERON:0000982!3.13e-08!5;UBERON:0003586!3.13e-08!5;UBERON:0004770!3.13e-08!5;UBERON:0001137!3.13e-08!5;UBERON:0006562!8.04e-08!11;UBERON:0009722!1.28e-07!11;UBERON:0007690!1.28e-07!11;UBERON:0002090!5.42e-07!6;UBERON:0003351!8.89e-07!6|ontology_enrichment_uberon_v019=UBERON:0011135;4.52e-140;5!UBERON:0002216;4.52e-140;5!UBERON:0011134;4.52e-140;5!UBERON:0002209;4.52e-140;5!UBERON:0002213;4.52e-140;5!UBERON:0007844;4.52e-140;5!UBERON:0011138;4.52e-140;5!UBERON:0001130;4.52e-140;5!UBERON:0001066;4.52e-140;5!UBERON:0001468;4.52e-140;5!UBERON:0004905;7.31e-88;8!UBERON:0000982;7.31e-88;8!UBERON:0004770;7.31e-88;8!UBERON:0002242;3.49e-84;3!UBERON:0006444;1.13e-57;2!UBERON:0001995;1.13e-57;2!UBERON:0004715;1.13e-57;2!UBERON:0000075;2.74e-44;16!UBERON:0002418;6.91e-39;3!UBERON:0004755;6.91e-39;3!UBERON:0002372;1.54e-29;1!UBERON:0001961;1.54e-29;1!UBERON:0001744;1.54e-29;1!UBERON:0001042;1.54e-29;1!UBERON:0001735;1.54e-29;1!UBERON:0004765;1.76e-27;26!UBERON:0006562;1.66e-15;2!UBERON:0001434;3.05e-13;36!UBERON:0002346;2.43e-08;4!UBERON:0000923;2.43e-08;4!UBERON:0010316;2.43e-08;4!UBERON:0005291;2.43e-08;4!UBERON:0002050;6.39e-07;5!UBERON:0005423;6.39e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0011135,3.92e-140,5;UBERON:0002216,3.92e-140,5;UBERON:0011134,3.92e-140,5;UBERON:0002209,3.92e-140,5;UBERON:0002213,3.92e-140,5;UBERON:0005856,3.92e-140,5;UBERON:0005866,3.92e-140,5;UBERON:0005863,3.92e-140,5;UBERON:0007844,3.92e-140,5;UBERON:0011138,3.92e-140,5;UBERON:0001130,3.92e-140,5;UBERON:0001066,3.92e-140,5;UBERON:0001468,3.92e-140,5;UBERON:0004905,6.68e-88,8;UBERON:0000982,6.68e-88,8;UBERON:0004770,6.68e-88,8;UBERON:0002242,3.03e-84,3;UBERON:0003068,3.03e-84,3;UBERON:0002328,3.03e-84,3;UBERON:0004880,3.03e-84,3;UBERON:0006444,1.13e-57,2;UBERON:0001995,1.13e-57,2;UBERON:0004715,1.13e-57,2;UBERON:0000075,2.62e-44,16;UBERON:0002418,6.91e-39,3;UBERON:0004755,6.91e-39,3;UBERON:0002372,1.33e-29,1;UBERON:0001961,1.33e-29,1;UBERON:0001744,1.33e-29,1;UBERON:0001735,1.33e-29,1;UBERON:0011137,8.27e-19,14;UBERON:0004765,4.08e-08,90;UBERON:0001434,2.47e-07,100|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,4.45558870656168,3.64537113300707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.280901613404497,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4538298343828,1.50051156317903,1.35632511849868,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5075 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8615 | |||
|TSSclassifier=S | |||
|UniProt=P15863 | |||
|association_with_transcript=118bp_to_BC069134_5end | |||
|coexpression_cluster_id=C1479 | |||
|description=CAGE_peak_4_at_PAX1_5end | |||
|id=chr20:21687193..21687206,+ | |||
|ontology_enrichment_celltype=CL:0002564!1.60e-27!3;CL:0002602!3.13e-19!2 | |||
|ontology_enrichment_celltype_v019=CL:0002564;3.49e-84;3!CL:0002602;1.13e-57;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,3.03e-84,3;CL:0002602,1.13e-57,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002242!1.60e-27!3;UBERON:0003068!1.60e-27!3;UBERON:0002328!1.60e-27!3;UBERON:0004880!1.60e-27!3;UBERON:0009568!3.13e-19!2;UBERON:0002216!3.13e-19!2;UBERON:0002209!3.13e-19!2;UBERON:0002213!3.13e-19!2;UBERON:0004267!3.13e-19!2;UBERON:0006444!3.13e-19!2;UBERON:0001995!3.13e-19!2;UBERON:0004715!3.13e-19!2;UBERON:0001468!3.13e-19!2;UBERON:0001130!3.13e-19!2;UBERON:0001066!3.13e-19!2;UBERON:0000341!2.04e-18!2;UBERON:0000974!3.06e-14!10;UBERON:0002418!3.85e-13!3;UBERON:0004755!3.85e-13!3;UBERON:0002372!1.98e-10!1;UBERON:0001961!1.98e-10!1;UBERON:0001744!1.98e-10!1;UBERON:0001735!1.98e-10!1;UBERON:0007029!3.40e-10!1;UBERON:0002370!9.42e-10!4;UBERON:0005058!9.42e-10!4;UBERON:0009113!9.42e-10!4;UBERON:0003295!9.42e-10!4;UBERON:0005562!9.42e-10!4;UBERON:0001042!1.48e-08!10;UBERON:0009145!1.48e-08!10;UBERON:0004905!3.13e-08!5;UBERON:0005174!3.13e-08!5;UBERON:0000982!3.13e-08!5;UBERON:0003586!3.13e-08!5;UBERON:0004770!3.13e-08!5;UBERON:0001137!3.13e-08!5;UBERON:0006562!8.04e-08!11;UBERON:0009722!1.28e-07!11;UBERON:0007690!1.28e-07!11;UBERON:0002090!5.42e-07!6;UBERON:0003351!8.89e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;4.52e-140;5!UBERON:0002216;4.52e-140;5!UBERON:0011134;4.52e-140;5!UBERON:0002209;4.52e-140;5!UBERON:0002213;4.52e-140;5!UBERON:0007844;4.52e-140;5!UBERON:0011138;4.52e-140;5!UBERON:0001130;4.52e-140;5!UBERON:0001066;4.52e-140;5!UBERON:0001468;4.52e-140;5!UBERON:0004905;7.31e-88;8!UBERON:0000982;7.31e-88;8!UBERON:0004770;7.31e-88;8!UBERON:0002242;3.49e-84;3!UBERON:0006444;1.13e-57;2!UBERON:0001995;1.13e-57;2!UBERON:0004715;1.13e-57;2!UBERON:0000075;2.74e-44;16!UBERON:0002418;6.91e-39;3!UBERON:0004755;6.91e-39;3!UBERON:0002372;1.54e-29;1!UBERON:0001961;1.54e-29;1!UBERON:0001744;1.54e-29;1!UBERON:0001042;1.54e-29;1!UBERON:0001735;1.54e-29;1!UBERON:0004765;1.76e-27;26!UBERON:0006562;1.66e-15;2!UBERON:0001434;3.05e-13;36!UBERON:0002346;2.43e-08;4!UBERON:0000923;2.43e-08;4!UBERON:0010316;2.43e-08;4!UBERON:0005291;2.43e-08;4!UBERON:0002050;6.39e-07;5!UBERON:0005423;6.39e-07;5 | |||
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|short_description=p4@PAX1 | |||
}} |
Revision as of 07:45, 12 September 2013
Short description: | p4@PAX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_PAX1_5end |
Coexpression cluster: | C1479_tonsil_Nucleus_thymus_Anulus_neuroectodermal_vein_throat |
Association with transcript: | 118bp_to_BC069134_5end |
EntrezGene: | PAX1 |
HGNC: | 8615 |
UniProt: | P15863 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 3.03e-84 | 3 |
annulus pulposus cell | 1.13e-57 | 2 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 3.92e-140 | 5 |
symphysis | 3.92e-140 | 5 |
nonsynovial joint | 3.92e-140 | 5 |
fibrous joint | 3.92e-140 | 5 |
cartilaginous joint | 3.92e-140 | 5 |
developing mesenchymal condensation | 3.92e-140 | 5 |
pre-cartilage condensation | 3.92e-140 | 5 |
cartilaginous condensation | 3.92e-140 | 5 |
cartilage element | 3.92e-140 | 5 |
post-cranial axial skeletal system | 3.92e-140 | 5 |
vertebral column | 3.92e-140 | 5 |
intervertebral disk | 3.92e-140 | 5 |
intervertebral joint | 3.92e-140 | 5 |
articulation | 6.68e-88 | 8 |
skeletal joint | 6.68e-88 | 8 |
articular system | 6.68e-88 | 8 |
nucleus pulposus | 3.03e-84 | 3 |
axial mesoderm | 3.03e-84 | 3 |
notochord | 3.03e-84 | 3 |
chordamesoderm | 3.03e-84 | 3 |
annulus fibrosus | 1.13e-57 | 2 |
fibrocartilage | 1.13e-57 | 2 |
annulus fibrosus disci intervertebralis | 1.13e-57 | 2 |
subdivision of skeletal system | 2.62e-44 | 16 |
cartilage tissue | 6.91e-39 | 3 |
skeletal tissue | 6.91e-39 | 3 |
tonsil | 1.33e-29 | 1 |
mucosa-associated lymphoid tissue | 1.33e-29 | 1 |
lymphoid tissue | 1.33e-29 | 1 |
tonsillar ring | 1.33e-29 | 1 |
axial skeletal system | 8.27e-19 | 14 |
skeletal element | 4.08e-08 | 90 |
skeletal system | 2.47e-07 | 100 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.