FFCP PHASE1:Hg19::chr20:30277227..30277231,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C17|description=CAGE_peak_at_chr20:30277227..30277231,-|id=chr20:30277227..30277231,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000322;8.73e-08;3!CL:0000313;7.12e-07;1|ontology_enrichment_celltype_v019_2=CL:0000322,8.77e-08,3;CL:0000313,7.77e-07,1|ontology_enrichment_development_v019=UBERON:0005062;3.80e-12;4!UBERON:0007284;3.80e-12;4!UBERON:0001041;1.40e-07;30!UBERON:0003104;5.31e-07;31|ontology_enrichment_disease=DOID:0050687!3.58e-12!143;DOID:305!4.60e-10!106;DOID:162!8.19e-10!235;DOID:14566!1.13e-09!239|ontology_enrichment_disease_v019=DOID:3910;2.94e-11;2!DOID:3908;4.70e-10;5!DOID:0050615;6.09e-08;16!DOID:2152;7.12e-07;1|ontology_enrichment_disease_v019_2=DOID:3910,2.97e-11,2;DOID:3908,4.81e-10,5;DOID:0050615,7.74e-08,16;DOID:2152,7.77e-07,1|ontology_enrichment_uberon=UBERON:0007023!1.09e-09!115;UBERON:0002346!2.94e-09!90;UBERON:0003075!3.65e-09!86;UBERON:0007284!3.65e-09!86;UBERON:0001049!8.19e-09!57;UBERON:0005068!8.19e-09!57;UBERON:0006241!8.19e-09!57;UBERON:0007135!8.19e-09!57;UBERON:0000955!2.91e-08!69;UBERON:0006238!2.91e-08!69;UBERON:0002780!1.17e-07!41;UBERON:0001890!1.17e-07!41;UBERON:0006240!1.17e-07!41;UBERON:0001017!2.48e-07!82;UBERON:0003080!3.08e-07!42;UBERON:0002020!5.28e-07!34;UBERON:0003528!5.28e-07!34;UBERON:0002616!6.69e-07!59;UBERON:0000073!6.84e-07!94;UBERON:0001016!6.84e-07!94;UBERON:0005743!8.03e-07!86|ontology_enrichment_uberon_v019=UBERON:0003978;5.11e-16;3!UBERON:0000946;5.11e-16;3!UBERON:0004903;2.94e-11;2!UBERON:0002133;2.94e-11;2!UBERON:0002173;2.94e-11;2!UBERON:0002186;2.94e-11;2!UBERON:0000058;2.18e-08;10!UBERON:0004821;8.73e-08;3!UBERON:0007499;8.73e-08;3!UBERON:0003215;8.73e-08;3!UBERON:0010368;8.73e-08;3!UBERON:0009911;8.73e-08;3!UBERON:0002299;8.73e-08;3!UBERON:0006524;8.73e-08;3!UBERON:0008874;8.73e-08;3!UBERON:0002169;8.73e-08;3!UBERON:0004894;8.73e-08;3!UBERON:0004911;7.12e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0003978,3.89e-16,3;UBERON:0009751,3.89e-16,3;UBERON:0000946,3.89e-16,3;UBERON:0002523,3.89e-16,3;UBERON:0005983,3.89e-16,3;UBERON:0002165,3.89e-16,3;UBERON:0002062,3.89e-16,3;UBERON:0007280,3.89e-16,3;UBERON:0004903,2.97e-11,2;UBERON:0002173,2.97e-11,2;UBERON:0002186,2.97e-11,2;UBERON:0002133,4.05e-11,2;UBERON:0004821,8.77e-08,3;UBERON:0003215,8.77e-08,3;UBERON:0010368,8.77e-08,3;UBERON:0009911,8.77e-08,3;UBERON:0002299,8.77e-08,3;UBERON:0006524,8.77e-08,3;UBERON:0008874,8.77e-08,3;UBERON:0002169,8.77e-08,3;UBERON:0004894,8.77e-08,3;UBERON:0005157,2.75e-07,47;UBERON:0004797,3.49e-07,7;UBERON:0004911,7.77e-07,1|phase1_expression=0.181678379270557,0.642301571672949,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0,0,0.204000691244253,0,0.286235987131057,0.410623275218653,0.251085279189606,0.382067028739756,0.246301768349837,0.472264687882075,0,0,0.154816123316076,0,0,0,0.542270404062111,0.284338464974843,0,0,0.601633342410425,0.217010870715852,0.223915474239924,0,0.515151135268373,0,0,0,0.232429036905685,0,0,0.28769239232215,0.512321413058201,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0,0,0,0.56738522469114,0.622822248995575,0.251248665256743,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0.393010762749165,0,0.167186495390678,0,0,0,0,0,0,0,0.25618263945135,0.390178042679635,0.164437904603676,0,0.579606171470105,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0.327447688744282,0,0,0.649094787309367,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0,0.33472061276467,0,0,0.24406205754817,0.367663080345869,0,0.267899184852239,0.44905874525234,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.561803226808994,0.816616685019573,0.61417158655884,0.103325781175765,0,0,0,0,0,0.625592599359821,0.554128230968366,0,0.30648779579902,0.300476117813194,0,0.538168907066586,0,0,0,0,0.515281080091258,0.18611685633159,0.337552664482532,0.0974370051611986,0,0.184099797284599,0,0,0.10075209822764,0.339121184620975,0,0,0,0.121973706129595,0.132529768321485,0,0,0,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0.441463099414651,1.8448265781467,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0.738651018262192,0,0.148631162288728,0,0,0,0.179117045405697,0,0,17.243213326358,0.176096868026452,0,0.144119953416961,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0.26593811658487,0,0.514414748524284,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0.112085143993527,0,0.215627574859517,0.128343036279748,0.254094624222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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_at_chr20:30277227..30277231,- | |||
|id=chr20:30277227..30277231,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000322;8.73e-08;3!CL:0000313;7.12e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,8.77e-08,3;CL:0000313,7.77e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0005062;3.80e-12;4!UBERON:0007284;3.80e-12;4!UBERON:0001041;1.40e-07;30!UBERON:0003104;5.31e-07;31 | |||
|ontology_enrichment_disease=DOID:0050687!3.58e-12!143;DOID:305!4.60e-10!106;DOID:162!8.19e-10!235;DOID:14566!1.13e-09!239 | |||
|ontology_enrichment_disease_v019=DOID:3910;2.94e-11;2!DOID:3908;4.70e-10;5!DOID:0050615;6.09e-08;16!DOID:2152;7.12e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,2.97e-11,2;DOID:3908,4.81e-10,5;DOID:0050615,7.74e-08,16;DOID:2152,7.77e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.09e-09!115;UBERON:0002346!2.94e-09!90;UBERON:0003075!3.65e-09!86;UBERON:0007284!3.65e-09!86;UBERON:0001049!8.19e-09!57;UBERON:0005068!8.19e-09!57;UBERON:0006241!8.19e-09!57;UBERON:0007135!8.19e-09!57;UBERON:0000955!2.91e-08!69;UBERON:0006238!2.91e-08!69;UBERON:0002780!1.17e-07!41;UBERON:0001890!1.17e-07!41;UBERON:0006240!1.17e-07!41;UBERON:0001017!2.48e-07!82;UBERON:0003080!3.08e-07!42;UBERON:0002020!5.28e-07!34;UBERON:0003528!5.28e-07!34;UBERON:0002616!6.69e-07!59;UBERON:0000073!6.84e-07!94;UBERON:0001016!6.84e-07!94;UBERON:0005743!8.03e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;5.11e-16;3!UBERON:0000946;5.11e-16;3!UBERON:0004903;2.94e-11;2!UBERON:0002133;2.94e-11;2!UBERON:0002173;2.94e-11;2!UBERON:0002186;2.94e-11;2!UBERON:0000058;2.18e-08;10!UBERON:0004821;8.73e-08;3!UBERON:0007499;8.73e-08;3!UBERON:0003215;8.73e-08;3!UBERON:0010368;8.73e-08;3!UBERON:0009911;8.73e-08;3!UBERON:0002299;8.73e-08;3!UBERON:0006524;8.73e-08;3!UBERON:0008874;8.73e-08;3!UBERON:0002169;8.73e-08;3!UBERON:0004894;8.73e-08;3!UBERON:0004911;7.12e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,3.89e-16,3;UBERON:0009751,3.89e-16,3;UBERON:0000946,3.89e-16,3;UBERON:0002523,3.89e-16,3;UBERON:0005983,3.89e-16,3;UBERON:0002165,3.89e-16,3;UBERON:0002062,3.89e-16,3;UBERON:0007280,3.89e-16,3;UBERON:0004903,2.97e-11,2;UBERON:0002173,2.97e-11,2;UBERON:0002186,2.97e-11,2;UBERON:0002133,4.05e-11,2;UBERON:0004821,8.77e-08,3;UBERON:0003215,8.77e-08,3;UBERON:0010368,8.77e-08,3;UBERON:0009911,8.77e-08,3;UBERON:0002299,8.77e-08,3;UBERON:0006524,8.77e-08,3;UBERON:0008874,8.77e-08,3;UBERON:0002169,8.77e-08,3;UBERON:0004894,8.77e-08,3;UBERON:0005157,2.75e-07,47;UBERON:0004797,3.49e-07,7;UBERON:0004911,7.77e-07,1 | |||
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| |||
|short_description=p@chr20:30277227..30277231,- | |||
}} |
Revision as of 07:57, 12 September 2013
Short description: | p@chr20:30277227..30277231, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:30277227..30277231, - |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 8.77e-08 | 3 |
serous secreting cell | 7.77e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
valve | 3.89e-16 | 3 |
cardiac mesenchyme | 3.89e-16 | 3 |
cardial valve | 3.89e-16 | 3 |
tunica intima | 3.89e-16 | 3 |
heart layer | 3.89e-16 | 3 |
endocardium | 3.89e-16 | 3 |
endocardial cushion | 3.89e-16 | 3 |
presumptive endocardium | 3.89e-16 | 3 |
bronchoalveolar duct junction | 2.97e-11 | 2 |
alveolar duct | 2.97e-11 | 2 |
bronchiole | 2.97e-11 | 2 |
atrioventricular valve | 4.05e-11 | 2 |
pulmonary alveolus epithelium | 8.77e-08 | 3 |
alveolus | 8.77e-08 | 3 |
pulmonary lobule | 8.77e-08 | 3 |
lobule | 8.77e-08 | 3 |
alveolus of lung | 8.77e-08 | 3 |
alveolar system | 8.77e-08 | 3 |
pulmonary acinus | 8.77e-08 | 3 |
alveolar sac | 8.77e-08 | 3 |
alveolar wall | 8.77e-08 | 3 |
epithelial fold | 2.75e-07 | 47 |
blood vessel layer | 3.49e-07 | 7 |
epithelium of female gonad | 7.77e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 2.97e-11 | 2 |
non-small cell lung carcinoma | 4.81e-10 | 5 |
respiratory system cancer | 7.74e-08 | 16 |
ovary epithelial cancer | 7.77e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.