FFCP PHASE1:Hg19::chr20:62655876..62655885,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C55|description=CAGE_peak_at_chr20:62655876..62655885,+|id=chr20:62655876..62655885,+|ontology_enrichment_celltype=CL:0000181!8.60e-52!12;CL:0000417!8.60e-52!12;CL:0000668!8.60e-52!12;CL:0000414!8.60e-52!12;CL:0000412!8.60e-52!12;CL:0000182!8.60e-52!12;CL:0000223!2.79e-15!59;CL:0002253!1.37e-13!2;CL:0002563!1.92e-07!4|ontology_enrichment_celltype_v019=CL:0000182;4.43e-82;12|ontology_enrichment_celltype_v019_2=CL:0000182,4.43e-82,12;CL:0000223,1.12e-17,58|ontology_enrichment_development_v019=UBERON:0004161;9.97e-58;11!UBERON:0009497;5.24e-49;13!UBERON:0001041;9.28e-22;30!UBERON:0003104;7.42e-21;31!CL:0000223;8.24e-12;58|ontology_enrichment_disease=DOID:7!1.08e-10!39|ontology_enrichment_disease_v019=DOID:7;1.07e-15;39|ontology_enrichment_disease_v019_2=DOID:7,6.34e-17,39|ontology_enrichment_uberon=UBERON:0002107!6.62e-33!19;UBERON:0006925!6.62e-33!19;UBERON:0008836!6.62e-33!19;UBERON:0008835!1.76e-28!22;UBERON:0003894!1.76e-28!22;UBERON:0009854!2.91e-27!23;UBERON:0007499!4.07e-25!25;UBERON:0009497!4.07e-25!25;UBERON:0000015!4.07e-25!25;UBERON:0002423!4.07e-25!25;UBERON:0006235!4.07e-25!25;UBERON:0004161!4.07e-25!25;UBERON:0005057!3.63e-24!26;UBERON:0009856!3.63e-24!26;UBERON:0002365!2.48e-20!31;UBERON:0002330!2.48e-20!31;UBERON:0002368!4.75e-18!35;UBERON:0003929!1.11e-16!54;UBERON:0000949!4.14e-14!45;UBERON:0005172!1.36e-11!55;UBERON:0005173!1.36e-11!55;UBERON:0005911!4.99e-11!82;UBERON:0002530!8.02e-11!59;UBERON:0002417!1.79e-10!61;UBERON:0000916!1.79e-10!61;UBERON:0001052!1.92e-07!4;UBERON:0001242!1.92e-07!4;UBERON:0001262!1.92e-07!4;UBERON:0004786!1.92e-07!4;UBERON:0004808!1.92e-07!4;UBERON:0001277!1.92e-07!4;UBERON:0000077!5.80e-07!130;UBERON:0004921!5.80e-07!129;UBERON:0004185!5.80e-07!129|ontology_enrichment_uberon_v019=UBERON:0002107;3.17e-52;19!UBERON:0006925;3.17e-52;19!UBERON:0002423;6.36e-40;25!UBERON:0002365;4.46e-31;31!UBERON:0002330;4.46e-31;31!UBERON:0002368;9.59e-29;33!UBERON:0000949;1.68e-21;43!UBERON:0002417;7.03e-14;58!UBERON:0000916;7.03e-14;58!UBERON:0002530;1.80e-13;57!UBERON:0005172;1.15e-11;52!UBERON:0005173;1.15e-11;52|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.17e-52,19;UBERON:0006925,3.17e-52,19;UBERON:0008836,3.17e-52,19;UBERON:0008835,3.09e-45,22;UBERON:0003894,3.09e-45,22;UBERON:0009854,2.60e-43,23;UBERON:0007499,6.36e-40,25;UBERON:0009497,6.36e-40,25;UBERON:0000015,6.36e-40,25;UBERON:0002423,6.36e-40,25;UBERON:0006235,6.36e-40,25;UBERON:0004161,6.36e-40,25;UBERON:0009856,2.01e-38,26;UBERON:0002365,2.26e-32,31;UBERON:0002330,2.26e-32,31;UBERON:0002368,9.00e-29,35;UBERON:0000949,1.46e-22,45;UBERON:0003929,6.22e-19,54;UBERON:0005172,6.22e-19,54;UBERON:0005173,6.22e-19,54;UBERON:0002530,2.16e-17,59;UBERON:0002417,4.10e-17,60;UBERON:0000916,4.10e-17,60;UBERON:0005911,1.04e-12,82;UBERON:0001041,5.13e-12,87;UBERON:0005177,1.95e-10,101;UBERON:0009569,1.80e-09,112;UBERON:0003914,4.32e-09,117;UBERON:0004921,6.01e-09,118;UBERON:0005256,9.67e-09,122;UBERON:0001007,2.16e-07,145;UBERON:0001555,2.16e-07,145;UBERON:0007026,2.16e-07,145;UBERON:0000490,2.68e-07,148;UBERON:0001048,8.66e-07,160;UBERON:0003104,8.66e-07,160;UBERON:0009142,8.66e-07,160;UBERON:0004119,9.48e-07,160;UBERON:0000925,9.48e-07,160;UBERON:0006595,9.48e-07,160|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,2.28471228690949,2.39005989305383,1.88729922791718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_at_chr20:62655876..62655885,+ | |||
|id=chr20:62655876..62655885,+ | |||
|ontology_enrichment_celltype=CL:0000181!8.60e-52!12;CL:0000417!8.60e-52!12;CL:0000668!8.60e-52!12;CL:0000414!8.60e-52!12;CL:0000412!8.60e-52!12;CL:0000182!8.60e-52!12;CL:0000223!2.79e-15!59;CL:0002253!1.37e-13!2;CL:0002563!1.92e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.43e-82;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.43e-82,12;CL:0000223,1.12e-17,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.97e-58;11!UBERON:0009497;5.24e-49;13!UBERON:0001041;9.28e-22;30!UBERON:0003104;7.42e-21;31!CL:0000223;8.24e-12;58 | |||
|ontology_enrichment_disease=DOID:7!1.08e-10!39 | |||
|ontology_enrichment_disease_v019=DOID:7;1.07e-15;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,6.34e-17,39 | |||
|ontology_enrichment_uberon=UBERON:0002107!6.62e-33!19;UBERON:0006925!6.62e-33!19;UBERON:0008836!6.62e-33!19;UBERON:0008835!1.76e-28!22;UBERON:0003894!1.76e-28!22;UBERON:0009854!2.91e-27!23;UBERON:0007499!4.07e-25!25;UBERON:0009497!4.07e-25!25;UBERON:0000015!4.07e-25!25;UBERON:0002423!4.07e-25!25;UBERON:0006235!4.07e-25!25;UBERON:0004161!4.07e-25!25;UBERON:0005057!3.63e-24!26;UBERON:0009856!3.63e-24!26;UBERON:0002365!2.48e-20!31;UBERON:0002330!2.48e-20!31;UBERON:0002368!4.75e-18!35;UBERON:0003929!1.11e-16!54;UBERON:0000949!4.14e-14!45;UBERON:0005172!1.36e-11!55;UBERON:0005173!1.36e-11!55;UBERON:0005911!4.99e-11!82;UBERON:0002530!8.02e-11!59;UBERON:0002417!1.79e-10!61;UBERON:0000916!1.79e-10!61;UBERON:0001052!1.92e-07!4;UBERON:0001242!1.92e-07!4;UBERON:0001262!1.92e-07!4;UBERON:0004786!1.92e-07!4;UBERON:0004808!1.92e-07!4;UBERON:0001277!1.92e-07!4;UBERON:0000077!5.80e-07!130;UBERON:0004921!5.80e-07!129;UBERON:0004185!5.80e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.17e-52;19!UBERON:0006925;3.17e-52;19!UBERON:0002423;6.36e-40;25!UBERON:0002365;4.46e-31;31!UBERON:0002330;4.46e-31;31!UBERON:0002368;9.59e-29;33!UBERON:0000949;1.68e-21;43!UBERON:0002417;7.03e-14;58!UBERON:0000916;7.03e-14;58!UBERON:0002530;1.80e-13;57!UBERON:0005172;1.15e-11;52!UBERON:0005173;1.15e-11;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.17e-52,19;UBERON:0006925,3.17e-52,19;UBERON:0008836,3.17e-52,19;UBERON:0008835,3.09e-45,22;UBERON:0003894,3.09e-45,22;UBERON:0009854,2.60e-43,23;UBERON:0007499,6.36e-40,25;UBERON:0009497,6.36e-40,25;UBERON:0000015,6.36e-40,25;UBERON:0002423,6.36e-40,25;UBERON:0006235,6.36e-40,25;UBERON:0004161,6.36e-40,25;UBERON:0009856,2.01e-38,26;UBERON:0002365,2.26e-32,31;UBERON:0002330,2.26e-32,31;UBERON:0002368,9.00e-29,35;UBERON:0000949,1.46e-22,45;UBERON:0003929,6.22e-19,54;UBERON:0005172,6.22e-19,54;UBERON:0005173,6.22e-19,54;UBERON:0002530,2.16e-17,59;UBERON:0002417,4.10e-17,60;UBERON:0000916,4.10e-17,60;UBERON:0005911,1.04e-12,82;UBERON:0001041,5.13e-12,87;UBERON:0005177,1.95e-10,101;UBERON:0009569,1.80e-09,112;UBERON:0003914,4.32e-09,117;UBERON:0004921,6.01e-09,118;UBERON:0005256,9.67e-09,122;UBERON:0001007,2.16e-07,145;UBERON:0001555,2.16e-07,145;UBERON:0007026,2.16e-07,145;UBERON:0000490,2.68e-07,148;UBERON:0001048,8.66e-07,160;UBERON:0003104,8.66e-07,160;UBERON:0009142,8.66e-07,160;UBERON:0004119,9.48e-07,160;UBERON:0000925,9.48e-07,160;UBERON:0006595,9.48e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,2.28471228690949,2.39005989305383,1.88729922791718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr20:62655876..62655885,+ | |||
}} |
Revision as of 09:40, 12 September 2013
Short description: | p@chr20:62655876..62655885, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:62655876..62655885, + |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
0.0
0.5
1.0
1.5
2.0
2.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
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