FFCP PHASE1:Hg19::chr2:122288114..122288135,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23332|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17088|TSSclassifier=S|UniProt=|association_with_transcript=185bp_to_ENST00000485112_5end|description=CAGE_peak_10_at_CLASP1_5end|id=chr2:122288114..122288135,-|ontology_enrichment_celltype=CL:0002076!2.07e-08!43;CL:0000223!4.43e-07!59|ontology_enrichment_celltype_v019=CL:0002368;1.85e-21;13!CL:0002076;1.74e-18;42!CL:0000623;1.12e-17;3!CL:0002231;7.60e-09;3!CL:0002328;1.55e-08;3!CL:0002623;1.55e-08;3!CL:0000222;5.12e-07;1!CL:0002251;6.43e-07;20!CL:0002327;7.50e-07;4|ontology_enrichment_celltype_v019_2=CL:0002076,2.87e-24,42;CL:0002368,9.31e-22,13;CL:0000223,2.28e-19,58;CL:0000623,2.38e-17,3;CL:0000825,2.38e-17,3;CL:0002328,6.40e-09,3;CL:0002623,9.82e-09,3;CL:0002231,1.29e-08,3;CL:0002251,6.53e-07,20;CL:0002327,8.95e-07,4|ontology_enrichment_development_v019=CL:0000223;1.28e-11;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0004815;1.55e-08;3!UBERON:0002031;1.55e-08;3!UBERON:0001911;7.50e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0004815,6.40e-09,3;UBERON:0002031,6.40e-09,3;UBERON:0004119,7.85e-07,160;UBERON:0000925,7.85e-07,160;UBERON:0006595,7.85e-07,160;UBERON:0001911,8.95e-07,4;UBERON:0005333,8.95e-07,4;UBERON:0008425,8.95e-07,4;UBERON:0005311,8.95e-07,4|phase1_expression=0.181678379270557,0.428201047781966,0.563817616383885,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.410623275218653,0.376627918784408,0.229240217243854,0.328402357799783,0,0,0.383829398097213,0.154816123316076,1.83884244895785,0.30120591877825,1.84877005083394,0,0.284338464974843,0,0,0,0.434021741431704,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0.251248665256743,0.521482918420201,0.217188844705117,0,0,0,0.422510572623884,0,0,0,0.150176892841506,0,0,0,0,1.75996244461323,0,0,0,0.400395987036012,0.574752439954483,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0.196709770113833,0.393010762749165,0.616804496998528,0.167186495390678,0.977766799900771,0,0,0.668462741311041,0.589211814949674,0.221533894583621,0,0.25618263945135,0.390178042679635,0.164437904603676,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0.506039384039006,0.318565414324097,0.651083453856419,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0.821127996921047,0.403213486449465,1.60464117470104,0.434473211648397,0,0,0.12786256184353,0,0,0,0,0.486634870302636,0.567208902984407,0.221729397462564,0.175669571386252,0.196468613246569,0.728590576585084,0,0.649094787309367,0.174129737299267,0,0.238490624305342,0.571994910780128,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0.529636723252875,1.72101972449288,0,0,0,0,0,0.134710672069688,0,0,0,0.468642863667593,0,0,0,0.352303495931295,0.323745888736263,0.140450806702248,0,0.122834317311768,0.723280468230358,0,0,0,0.718618141816238,0.168336113954066,0.250237039743928,0.554128230968366,0,0.30648779579902,0,0,0.89694817844431,0.213557388818567,0,0.300091096084402,0.103052529238439,0.257640540045629,0,0.506328996723799,0.0974370051611986,0.757301322732344,0.184099797284599,0.161646056818812,0.355009592516614,0,0,0.57978255948989,0.272746120590835,1.72082757233402,0.365921118388786,0.132529768321485,0,0,0,0.36497735907583,1.56449532329816,0,0,0,0.721879481669586,0.236613600079688,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0.441463099414651,0.245976877086227,0,0.329250856225877,0,0.502644862058154,0.370353780634118,0.325808305310325,1.03993478527958,0,0,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0.425325291727159,5.73174545298229,1.16253575405585,0.766765358330422,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0.112131084345361,0,0,0,3.57656445851882,0,0,0,0,1.41849132023278,0.266422179016099,0.142977993658148,0,0.823240336780769,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,1.18218456121156,1.2937654491571,1.15508732651774,0.508189248444927,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0.178428988797162,0.315404830067869,0.234282829985426,0,0,0,0,0.184369168541703,0.260650843404249,0,0,0.206768026122887,0.431428401637234,0.106727557803444,1.5156378572313,0,0.30239029332968,0.496215615637554,0.306923946576125,0.561320188866147,0,0,0.321707842287215,0,0,0.177561725313127,0,0,0,0.241718899183244,1.00253235151642,3.13075362382048,0.114814448164607,0,0,0.451199612907412,0.308061348417659,0,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.206082023295445,0,0.082509499920588,0.574265537996172,0.650060246036521,0,0.193341436584244,0,0.460511024178389,0.137836572484531,0.429680979473094,0,0,0.356128142586949,2.47927373041467,2.69066094311149,8.1672135996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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23332 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17088 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=185bp_to_ENST00000485112_5end | |||
|description=CAGE_peak_10_at_CLASP1_5end | |||
|id=chr2:122288114..122288135,- | |||
|ontology_enrichment_celltype=CL:0002076!2.07e-08!43;CL:0000223!4.43e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.85e-21;13!CL:0002076;1.74e-18;42!CL:0000623;1.12e-17;3!CL:0002231;7.60e-09;3!CL:0002328;1.55e-08;3!CL:0002623;1.55e-08;3!CL:0000222;5.12e-07;1!CL:0002251;6.43e-07;20!CL:0002327;7.50e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.87e-24,42;CL:0002368,9.31e-22,13;CL:0000223,2.28e-19,58;CL:0000623,2.38e-17,3;CL:0000825,2.38e-17,3;CL:0002328,6.40e-09,3;CL:0002623,9.82e-09,3;CL:0002231,1.29e-08,3;CL:0002251,6.53e-07,20;CL:0002327,8.95e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000223;1.28e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.55e-08;3!UBERON:0002031;1.55e-08;3!UBERON:0001911;7.50e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,6.40e-09,3;UBERON:0002031,6.40e-09,3;UBERON:0004119,7.85e-07,160;UBERON:0000925,7.85e-07,160;UBERON:0006595,7.85e-07,160;UBERON:0001911,8.95e-07,4;UBERON:0005333,8.95e-07,4;UBERON:0008425,8.95e-07,4;UBERON:0005311,8.95e-07,4 | |||
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| |||
|short_description=p10@CLASP1 | |||
}} |
Revision as of 13:19, 12 September 2013
Short description: | p10@CLASP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_CLASP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 185bp_to_ENST00000485112_5end |
EntrezGene: | CLASP1 |
HGNC: | 17088 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.87e-24 | 42 |
respiratory epithelial cell | 9.31e-22 | 13 |
endodermal cell | 2.28e-19 | 58 |
natural killer cell | 2.38e-17 | 3 |
pro-NK cell | 2.38e-17 | 3 |
bronchial epithelial cell | 6.40e-09 | 3 |
acinar cell of salivary gland | 9.82e-09 | 3 |
epithelial cell of prostate | 1.29e-08 | 3 |
epithelial cell of alimentary canal | 6.53e-07 | 20 |
mammary gland epithelial cell | 8.95e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 6.40e-09 | 3 |
epithelium of bronchus | 6.40e-09 | 3 |
endoderm-derived structure | 7.85e-07 | 160 |
endoderm | 7.85e-07 | 160 |
presumptive endoderm | 7.85e-07 | 160 |
mammary gland | 8.95e-07 | 4 |
mammary bud | 8.95e-07 | 4 |
mammary ridge | 8.95e-07 | 4 |
mammary placode | 8.95e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.