FFCP PHASE1:Hg19::chr2:165603312..165603317,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:165603312..165603317,-|id=chr2:165603312..165603317,-|ontology_enrichment_celltype=CL:1000497!3.05e-23!18;CL:0002518!3.05e-23!18;CL:1000507!1.54e-22!12;CL:1000494!1.54e-22!12;CL:1000449!5.22e-17!16;CL:0000239!7.28e-07!3;CL:1000615!7.28e-07!3;CL:0002306!7.28e-07!3|ontology_enrichment_celltype_v019=CL:1000497;2.07e-24;17!CL:0002518;2.07e-24;17!CL:1000507;2.73e-11;10!CL:1000494;2.73e-11;10!CL:1000449;5.55e-08;15|ontology_enrichment_celltype_v019_2=CL:1000497,2.07e-24,17;CL:0002518,2.07e-24,17;CL:1000507,2.73e-11,10;CL:1000494,2.73e-11,10;CL:1000449,5.55e-08,15|ontology_enrichment_development_v019=UBERON:0003918;3.02e-11;10!UBERON:0007687;3.02e-11;10|ontology_enrichment_disease=DOID:4468!1.57e-09!2|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!1.20e-29!27;UBERON:0003918!1.20e-29!27;UBERON:0005095!1.20e-29!27;UBERON:0007687!1.20e-29!27;UBERON:0000489!5.57e-25!32;UBERON:0005172!1.18e-23!55;UBERON:0005173!1.18e-23!55;UBERON:0009773!1.54e-22!12;UBERON:0001231!1.54e-22!12;UBERON:0004810!1.54e-22!12;UBERON:0002417!2.86e-21!61;UBERON:0000916!2.86e-21!61;UBERON:0006554!4.31e-18!44;UBERON:0001008!1.10e-17!45;UBERON:0004211!5.22e-17!16;UBERON:0001285!5.22e-17!16;UBERON:0007684!5.22e-17!16;UBERON:0003220!5.22e-17!16;UBERON:0004208!5.22e-17!16;UBERON:0006555!4.96e-16!17;UBERON:0005103!4.96e-16!17;UBERON:0000083!4.96e-16!17;UBERON:0009201!4.96e-16!17;UBERON:0004819!4.96e-16!17;UBERON:0006553!4.96e-16!17;UBERON:0003074!4.96e-16!17;UBERON:0003060!4.96e-16!17;UBERON:0000080!3.67e-15!18;UBERON:0002120!3.67e-15!18;UBERON:0004875!3.67e-15!18;UBERON:0005721!3.67e-15!18;UBERON:0005754!3.67e-15!18;UBERON:0007297!3.67e-15!18;UBERON:0004876!1.11e-13!20;UBERON:0003887!4.79e-13!21;UBERON:0005177!7.65e-12!107;UBERON:0003103!2.08e-11!69;UBERON:0009569!3.56e-11!113;UBERON:0000058!1.34e-10!26;UBERON:0003064!1.59e-07!37;UBERON:0006853!7.28e-07!3;UBERON:0007685!7.28e-07!3;UBERON:0004134!7.28e-07!3|ontology_enrichment_uberon_v019=UBERON:0002113;1.03e-17;24!UBERON:0011143;1.03e-17;24!UBERON:0000489;6.74e-15;29!UBERON:0006554;1.90e-14;30!UBERON:0001008;1.90e-14;30!UBERON:0004211;2.73e-11;10!UBERON:0009773;2.73e-11;10!UBERON:0001231;2.73e-11;10!UBERON:0004810;2.73e-11;10!UBERON:0006555;5.55e-08;15!UBERON:0004819;5.55e-08;15!UBERON:0001285;5.55e-08;15!UBERON:0007684;5.55e-08;15|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.86e-16,26;UBERON:0003918,1.86e-16,26;UBERON:0011143,1.86e-16,26;UBERON:0005095,1.86e-16,26;UBERON:0007687,1.86e-16,26;UBERON:0000489,5.04e-14,31;UBERON:0004810,2.73e-11,10;UBERON:0006554,1.08e-09,47;UBERON:0001008,1.62e-09,48;UBERON:0005172,1.34e-08,54;UBERON:0005173,1.34e-08,54;UBERON:0004211,5.55e-08,15;UBERON:0009773,5.55e-08,15;UBERON:0001231,5.55e-08,15;UBERON:0001285,5.55e-08,15;UBERON:0007684,5.55e-08,15;UBERON:0004208,5.55e-08,15;UBERON:0002417,7.34e-08,60;UBERON:0000916,7.34e-08,60;UBERON:0006555,1.45e-07,16;UBERON:0004819,1.45e-07,16;UBERON:0003103,4.47e-07,68|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0.784349769176855,0,2.21658420675039,0,0,0,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329663433524666,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07963795609311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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:165603312..165603317,- | |||
|id=chr2:165603312..165603317,- | |||
|ontology_enrichment_celltype=CL:1000497!3.05e-23!18;CL:0002518!3.05e-23!18;CL:1000507!1.54e-22!12;CL:1000494!1.54e-22!12;CL:1000449!5.22e-17!16;CL:0000239!7.28e-07!3;CL:1000615!7.28e-07!3;CL:0002306!7.28e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:1000497;2.07e-24;17!CL:0002518;2.07e-24;17!CL:1000507;2.73e-11;10!CL:1000494;2.73e-11;10!CL:1000449;5.55e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,2.07e-24,17;CL:0002518,2.07e-24,17;CL:1000507,2.73e-11,10;CL:1000494,2.73e-11,10;CL:1000449,5.55e-08,15 | |||
|ontology_enrichment_development_v019=UBERON:0003918;3.02e-11;10!UBERON:0007687;3.02e-11;10 | |||
|ontology_enrichment_disease=DOID:4468!1.57e-09!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!1.20e-29!27;UBERON:0003918!1.20e-29!27;UBERON:0005095!1.20e-29!27;UBERON:0007687!1.20e-29!27;UBERON:0000489!5.57e-25!32;UBERON:0005172!1.18e-23!55;UBERON:0005173!1.18e-23!55;UBERON:0009773!1.54e-22!12;UBERON:0001231!1.54e-22!12;UBERON:0004810!1.54e-22!12;UBERON:0002417!2.86e-21!61;UBERON:0000916!2.86e-21!61;UBERON:0006554!4.31e-18!44;UBERON:0001008!1.10e-17!45;UBERON:0004211!5.22e-17!16;UBERON:0001285!5.22e-17!16;UBERON:0007684!5.22e-17!16;UBERON:0003220!5.22e-17!16;UBERON:0004208!5.22e-17!16;UBERON:0006555!4.96e-16!17;UBERON:0005103!4.96e-16!17;UBERON:0000083!4.96e-16!17;UBERON:0009201!4.96e-16!17;UBERON:0004819!4.96e-16!17;UBERON:0006553!4.96e-16!17;UBERON:0003074!4.96e-16!17;UBERON:0003060!4.96e-16!17;UBERON:0000080!3.67e-15!18;UBERON:0002120!3.67e-15!18;UBERON:0004875!3.67e-15!18;UBERON:0005721!3.67e-15!18;UBERON:0005754!3.67e-15!18;UBERON:0007297!3.67e-15!18;UBERON:0004876!1.11e-13!20;UBERON:0003887!4.79e-13!21;UBERON:0005177!7.65e-12!107;UBERON:0003103!2.08e-11!69;UBERON:0009569!3.56e-11!113;UBERON:0000058!1.34e-10!26;UBERON:0003064!1.59e-07!37;UBERON:0006853!7.28e-07!3;UBERON:0007685!7.28e-07!3;UBERON:0004134!7.28e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;1.03e-17;24!UBERON:0011143;1.03e-17;24!UBERON:0000489;6.74e-15;29!UBERON:0006554;1.90e-14;30!UBERON:0001008;1.90e-14;30!UBERON:0004211;2.73e-11;10!UBERON:0009773;2.73e-11;10!UBERON:0001231;2.73e-11;10!UBERON:0004810;2.73e-11;10!UBERON:0006555;5.55e-08;15!UBERON:0004819;5.55e-08;15!UBERON:0001285;5.55e-08;15!UBERON:0007684;5.55e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.86e-16,26;UBERON:0003918,1.86e-16,26;UBERON:0011143,1.86e-16,26;UBERON:0005095,1.86e-16,26;UBERON:0007687,1.86e-16,26;UBERON:0000489,5.04e-14,31;UBERON:0004810,2.73e-11,10;UBERON:0006554,1.08e-09,47;UBERON:0001008,1.62e-09,48;UBERON:0005172,1.34e-08,54;UBERON:0005173,1.34e-08,54;UBERON:0004211,5.55e-08,15;UBERON:0009773,5.55e-08,15;UBERON:0001231,5.55e-08,15;UBERON:0001285,5.55e-08,15;UBERON:0007684,5.55e-08,15;UBERON:0004208,5.55e-08,15;UBERON:0002417,7.34e-08,60;UBERON:0000916,7.34e-08,60;UBERON:0006555,1.45e-07,16;UBERON:0004819,1.45e-07,16;UBERON:0003103,4.47e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0.784349769176855,0,2.21658420675039,0,0,0,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329663433524666,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07963795609311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:165603312..165603317,- | |||
}} |
Revision as of 14:27, 12 September 2013
Short description: | p@chr2:165603312..165603317, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:165603312..165603317, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 2.07e-24 | 17 |
kidney epithelial cell | 2.07e-24 | 17 |
kidney tubule cell | 2.73e-11 | 10 |
nephron tubule epithelial cell | 2.73e-11 | 10 |
epithelial cell of nephron | 5.55e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
kidney | 1.86e-16 | 26 |
kidney mesenchyme | 1.86e-16 | 26 |
upper urinary tract | 1.86e-16 | 26 |
kidney rudiment | 1.86e-16 | 26 |
kidney field | 1.86e-16 | 26 |
cavitated compound organ | 5.04e-14 | 31 |
nephron tubule epithelium | 2.73e-11 | 10 |
urinary system structure | 1.08e-09 | 47 |
renal system | 1.62e-09 | 48 |
abdomen element | 1.34e-08 | 54 |
abdominal segment element | 1.34e-08 | 54 |
nephron epithelium | 5.55e-08 | 15 |
renal tubule | 5.55e-08 | 15 |
nephron tubule | 5.55e-08 | 15 |
nephron | 5.55e-08 | 15 |
uriniferous tubule | 5.55e-08 | 15 |
nephrogenic mesenchyme | 5.55e-08 | 15 |
abdominal segment of trunk | 7.34e-08 | 60 |
abdomen | 7.34e-08 | 60 |
excretory tube | 1.45e-07 | 16 |
kidney epithelium | 1.45e-07 | 16 |
compound organ | 4.47e-07 | 68 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.