FFCP PHASE1:Mm9::chr10:59541618..59541632,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=19|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:59541618..59541632,+|id=chr10:59541618..59541632,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!1.18e-24!18;UBERON:0000948!1.18e-24!18;UBERON:0005498!1.18e-24!18;UBERON:0004140!1.18e-24!18;UBERON:0009881!1.18e-24!18;UBERON:0004141!1.18e-24!18;UBERON:0003084!1.18e-24!18;UBERON:0007005!1.18e-24!18;UBERON:0004139!1.18e-24!18;UBERON:0004291!1.18e-24!18;UBERON:0004535!6.67e-18!23;UBERON:0001009!6.67e-18!23;UBERON:0004872!4.97e-16!33;UBERON:0003103!5.18e-12!43;UBERON:0001048!4.70e-09!147;UBERON:0003914!3.97e-08!47|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.80e-60,18;UBERON:0000948,1.80e-60,18;UBERON:0005498,1.80e-60,18;UBERON:0004140,1.80e-60,18;UBERON:0009881,1.80e-60,18;UBERON:0004141,1.80e-60,18;UBERON:0003084,1.80e-60,18;UBERON:0007005,1.80e-60,18;UBERON:0004139,1.80e-60,18;UBERON:0004291,1.80e-60,18;UBERON:0004535,6.48e-47,23;UBERON:0001009,6.48e-47,23;UBERON:0004872,4.19e-32,33;UBERON:0003103,3.65e-24,43;UBERON:0003914,6.25e-22,47;UBERON:0003081,7.65e-11,87;UBERON:0010314,3.95e-10,92;UBERON:0000025,5.78e-09,114;UBERON:0004111,3.23e-08,122;UBERON:0001048,2.92e-07,134;UBERON:0000926,3.19e-07,120;UBERON:0004120,3.19e-07,120;UBERON:0006603,3.19e-07,120|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43752564364972,0,0,0,0.257259436035947,0.286533439938757,2.57836046138721,0,1.05798195854407,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0.101839363850316,0,0,0,0.260240885925407,0,0,0,0,0.2562274405697,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0,0.199034266818493,0,0,0,1.65700618028402,1.40715635988658,1.2604344302271,2.13070262026689,2.55793501271625,4.31947916084659,3.72054311600653,1.60964040839772,6.07179780309281,2.13927804887525,0.985004784474571,1.37816976227955,2.92399974850665,2.41505126820156,3.35516046900929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0.228497025219458,0,0,0.193952487167626,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0.568474235311454,0,0.169745085775188,0.234690248288502,1.00503754465089,0.714130922658041,0.195133647857799,0,0,0.159454768657487,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0.16488625294148,0.161464426695906,0,0,0,0,0,0,0.619160603889667,0,0.188368457004691,0.136694227721025,0,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0.598066184175915,0.165458490457098,0.194451188344048,0.129159823477731,0,0.234714477291508,0,0,0,0,0,0.405450430580328,0,0,0.179026695667481,0.198681354781265,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0.412085900803307,0,0.342869252385415,0,0,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p@chr10:59541618..59541632,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=19 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:59541618..59541632,+ | |||
|id=chr10:59541618..59541632,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.18e-24!18;UBERON:0000948!1.18e-24!18;UBERON:0005498!1.18e-24!18;UBERON:0004140!1.18e-24!18;UBERON:0009881!1.18e-24!18;UBERON:0004141!1.18e-24!18;UBERON:0003084!1.18e-24!18;UBERON:0007005!1.18e-24!18;UBERON:0004139!1.18e-24!18;UBERON:0004291!1.18e-24!18;UBERON:0004535!6.67e-18!23;UBERON:0001009!6.67e-18!23;UBERON:0004872!4.97e-16!33;UBERON:0003103!5.18e-12!43;UBERON:0001048!4.70e-09!147;UBERON:0003914!3.97e-08!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.80e-60,18;UBERON:0000948,1.80e-60,18;UBERON:0005498,1.80e-60,18;UBERON:0004140,1.80e-60,18;UBERON:0009881,1.80e-60,18;UBERON:0004141,1.80e-60,18;UBERON:0003084,1.80e-60,18;UBERON:0007005,1.80e-60,18;UBERON:0004139,1.80e-60,18;UBERON:0004291,1.80e-60,18;UBERON:0004535,6.48e-47,23;UBERON:0001009,6.48e-47,23;UBERON:0004872,4.19e-32,33;UBERON:0003103,3.65e-24,43;UBERON:0003914,6.25e-22,47;UBERON:0003081,7.65e-11,87;UBERON:0010314,3.95e-10,92;UBERON:0000025,5.78e-09,114;UBERON:0004111,3.23e-08,122;UBERON:0001048,2.92e-07,134;UBERON:0000926,3.19e-07,120;UBERON:0004120,3.19e-07,120;UBERON:0006603,3.19e-07,120 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43752564364972,0,0,0,0.257259436035947,0.286533439938757,2.57836046138721,0,1.05798195854407,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0.101839363850316,0,0,0,0.260240885925407,0,0,0,0,0.2562274405697,0.0937017245597288,0,0,0,0,0,0.278047249225598,0,0,0.199034266818493,0,0,0,1.65700618028402,1.40715635988658,1.2604344302271,2.13070262026689,2.55793501271625,4.31947916084659,3.72054311600653,1.60964040839772,6.07179780309281,2.13927804887525,0.985004784474571,1.37816976227955,2.92399974850665,2.41505126820156,3.35516046900929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0.228497025219458,0,0,0.193952487167626,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0.568474235311454,0,0.169745085775188,0.234690248288502,1.00503754465089,0.714130922658041,0.195133647857799,0,0,0.159454768657487,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0.16488625294148,0.161464426695906,0,0,0,0,0,0,0.619160603889667,0,0.188368457004691,0.136694227721025,0,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0.598066184175915,0.165458490457098,0.194451188344048,0.129159823477731,0,0.234714477291508,0,0,0,0,0,0.405450430580328,0,0,0.179026695667481,0.198681354781265,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0.412085900803307,0,0.342869252385415,0,0,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:59541618..59541632,+ | |||
}} |
Revision as of 16:58, 12 September 2013
Short description: | p@chr10:59541618..59541632, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:59541618..59541632, + |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.80e-60 | 18 |
heart | 1.80e-60 | 18 |
primitive heart tube | 1.80e-60 | 18 |
primary heart field | 1.80e-60 | 18 |
anterior lateral plate mesoderm | 1.80e-60 | 18 |
heart tube | 1.80e-60 | 18 |
heart primordium | 1.80e-60 | 18 |
cardiac mesoderm | 1.80e-60 | 18 |
cardiogenic plate | 1.80e-60 | 18 |
heart rudiment | 1.80e-60 | 18 |
cardiovascular system | 6.48e-47 | 23 |
circulatory system | 6.48e-47 | 23 |
splanchnic layer of lateral plate mesoderm | 4.19e-32 | 33 |
compound organ | 3.65e-24 | 43 |
epithelial tube | 6.25e-22 | 47 |
lateral plate mesoderm | 7.65e-11 | 87 |
structure with developmental contribution from neural crest | 3.95e-10 | 92 |
tube | 5.78e-09 | 114 |
anatomical conduit | 3.23e-08 | 122 |
primordium | 2.92e-07 | 134 |
mesoderm | 3.19e-07 | 120 |
mesoderm-derived structure | 3.19e-07 | 120 |
presumptive mesoderm | 3.19e-07 | 120 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.