FFCP PHASE1:Mm9::chr11:115041341..115041354,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:115041341..115041354,+|id=chr11:115041341..115041354,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000066,2.94e-09,25;CL:0000239,1.71e-07,6;CL:0000677,1.71e-07,6;CL:0000584,1.71e-07,6;CL:0000223,1.74e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!5.26e-09!128;UBERON:0001555!5.26e-09!128;UBERON:0007026!5.26e-09!128;UBERON:0004119!1.76e-08!130;UBERON:0000925!1.76e-08!130;UBERON:0006595!1.76e-08!130;UBERON:0004921!4.28e-08!126;UBERON:0004185!4.28e-08!126;UBERON:0000160!2.26e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.09e-18,31;UBERON:0000344,1.06e-13,15;UBERON:0005409,4.01e-11,47;UBERON:0004923,8.31e-10,24;UBERON:0001242,1.27e-09,13;UBERON:0001262,1.27e-09,13;UBERON:0004786,1.27e-09,13;UBERON:0001007,1.93e-07,116;UBERON:0001555,1.93e-07,116;UBERON:0007026,1.93e-07,116;UBERON:0004119,3.13e-07,118;UBERON:0000925,3.13e-07,118;UBERON:0006595,3.13e-07,118;UBERON:0002108,7.42e-07,4;UBERON:0001962,8.69e-07,2;UBERON:0001961,8.69e-07,2;UBERON:0001744,8.69e-07,2|phase1_expression=0,2.09385244583617,1.36499771816861,1.51232105653415,1.50268718983904,0.16787927191189,0.700837921786577,0.645616617207881,0.985521055061667,0.936258105287974,0,0.717949430958028,0.513602189793617,0.611942816932982,0,0,0,0,0.137114433605739,0,0.255129870453209,0.0992909512008853,0.522399578277871,3.03985603307473,1.60586496747019,0.57423196411502,2.15380998079537,2.15471232685889,6.08074942260396,0.756090389279792,1.77384408524244,0,0,0,0,0,0,0.418531630736908,0.7813353445238,0.523523743973798,0,0,0.971020706062307,0.125896817975577,0.101376931219515,0.183546752161682,0.782391344348039,0.872100625521786,0.439372365468944,1.55543919259427,0.839918529752175,0,0.167782606057736,0.725362142011344,1.00828139742739,0,0,0,0.404632921719196,0,0,0,0.889294796111139,0.449949858640699,3.9554654502679,0,0,0.768436610643109,0,0.135005938331691,0,0,0.662605622854841,0,0.0958454710182364,0,1.10115880999389,0,0.153606533256243,0,0,0,0.279182999001381,0.56276261003168,0.45839474333043,0,0,0,0,0,0,0,2.03991400112325,0.539703191637817,1.29955283489534,0.448026887097336,0.842666520790511,0.170430322578058,0.519572009205738,0,0,0,0,0,1.08245520505607,0.506719730950197,2.02209778005913,1.59857431606684,0,0,0,0,0,0.150722640552623,0,0,1.48316980640624,0,0,0,0,0,0,0.292780797011547,0.628340120440365,1.27728527604296,0.239630249011841,0,0,0.149790639404823,0.457500602818626,0,0,0.255715457330331,0.20778804455956,0,0.203678727700633,0.248813941220186,0.252722758433675,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,1.05780226665418,0,0.232236671860439,0.515469845288373,1.00841762311671,0.667134131534611,0.570676878337677,1.42358718463353,1.81168850196412,0.754005626400808,1.79060824837036,0.38992817423824,1.79763881730844,0.648414149624083,1.1948476395262,0.379335801906163,0,1.1270773567308,0.407302655690628,0.193952487167626,0.210407459670956,0.0632365371242573,0,0.156998727841375,0,0.592905254174298,0.166845105716094,0.196558995113203,0.224862112384854,0,0.482354319504834,0.25462585178142,0.575392274901621,0,0,4.31304619582064,0,0,0.757736633841335,0.358794827043824,0.482443521363367,0.554259570499814,0,0,0,0,0,0,0,0,0,0,0.491589944147214,0.172684981865896,0,0,0.54390568381871,0,0,0.321101179975584,0,0,0,0,0,0,0,0,0,0.404810701674894,0.292255857911312,0,0,0,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0.377210159511796,0,0,0,0,0.356497378384721,0,1.05418608574999,0,0.680879211507576,0,0.258717367565509,0.428674070063185,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0.361877549568935,0.119372344003136,0.492422699235184,1.1659233465194,0.18542530201051,0.170870880797853,0.206386867963223,0,0,0,0,0,0.139951452323658,0,0.954670618015114,0.474503990371703,0.203319467126849,0.216010681643603,0,0,0,0,0,0.90730481304255,0,1.12738587736838,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0.308132871494482,0,0.358053391334963,0.596044064343795,0.721172697119813,0.147689527174577,0.201932899896295,0.228620419965,0.100826185136841,0.292373642219257,0.288635524920988,0.350630706544707,0.453460767230423,0.665957860122194,0.807424709485281,0.839423081820392,0,0,0.183151624267265,0.214368379079066,0,0.564751842617067,0,0,0.171853182343688,0.685082519770642,0,0,0.45032120322422,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0.412085900803307,0,0,0,0,0,0.188218760830661,0,0,0,0.135804113845862,0,0,0,0.409231043169689,0,0,0.249810577937946,0,0,0.191288332068843,0,0|short_description=p@chr11:115041341..115041354,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:115041341..115041354,+ | |||
|id=chr11:115041341..115041354,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.94e-09,25;CL:0000239,1.71e-07,6;CL:0000677,1.71e-07,6;CL:0000584,1.71e-07,6;CL:0000223,1.74e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!5.26e-09!128;UBERON:0001555!5.26e-09!128;UBERON:0007026!5.26e-09!128;UBERON:0004119!1.76e-08!130;UBERON:0000925!1.76e-08!130;UBERON:0006595!1.76e-08!130;UBERON:0004921!4.28e-08!126;UBERON:0004185!4.28e-08!126;UBERON:0000160!2.26e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.09e-18,31;UBERON:0000344,1.06e-13,15;UBERON:0005409,4.01e-11,47;UBERON:0004923,8.31e-10,24;UBERON:0001242,1.27e-09,13;UBERON:0001262,1.27e-09,13;UBERON:0004786,1.27e-09,13;UBERON:0001007,1.93e-07,116;UBERON:0001555,1.93e-07,116;UBERON:0007026,1.93e-07,116;UBERON:0004119,3.13e-07,118;UBERON:0000925,3.13e-07,118;UBERON:0006595,3.13e-07,118;UBERON:0002108,7.42e-07,4;UBERON:0001962,8.69e-07,2;UBERON:0001961,8.69e-07,2;UBERON:0001744,8.69e-07,2 | |||
|phase1_expression=0,2.09385244583617,1.36499771816861,1.51232105653415,1.50268718983904,0.16787927191189,0.700837921786577,0.645616617207881,0.985521055061667,0.936258105287974,0,0.717949430958028,0.513602189793617,0.611942816932982,0,0,0,0,0.137114433605739,0,0.255129870453209,0.0992909512008853,0.522399578277871,3.03985603307473,1.60586496747019,0.57423196411502,2.15380998079537,2.15471232685889,6.08074942260396,0.756090389279792,1.77384408524244,0,0,0,0,0,0,0.418531630736908,0.7813353445238,0.523523743973798,0,0,0.971020706062307,0.125896817975577,0.101376931219515,0.183546752161682,0.782391344348039,0.872100625521786,0.439372365468944,1.55543919259427,0.839918529752175,0,0.167782606057736,0.725362142011344,1.00828139742739,0,0,0,0.404632921719196,0,0,0,0.889294796111139,0.449949858640699,3.9554654502679,0,0,0.768436610643109,0,0.135005938331691,0,0,0.662605622854841,0,0.0958454710182364,0,1.10115880999389,0,0.153606533256243,0,0,0,0.279182999001381,0.56276261003168,0.45839474333043,0,0,0,0,0,0,0,2.03991400112325,0.539703191637817,1.29955283489534,0.448026887097336,0.842666520790511,0.170430322578058,0.519572009205738,0,0,0,0,0,1.08245520505607,0.506719730950197,2.02209778005913,1.59857431606684,0,0,0,0,0,0.150722640552623,0,0,1.48316980640624,0,0,0,0,0,0,0.292780797011547,0.628340120440365,1.27728527604296,0.239630249011841,0,0,0.149790639404823,0.457500602818626,0,0,0.255715457330331,0.20778804455956,0,0.203678727700633,0.248813941220186,0.252722758433675,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,1.05780226665418,0,0.232236671860439,0.515469845288373,1.00841762311671,0.667134131534611,0.570676878337677,1.42358718463353,1.81168850196412,0.754005626400808,1.79060824837036,0.38992817423824,1.79763881730844,0.648414149624083,1.1948476395262,0.379335801906163,0,1.1270773567308,0.407302655690628,0.193952487167626,0.210407459670956,0.0632365371242573,0,0.156998727841375,0,0.592905254174298,0.166845105716094,0.196558995113203,0.224862112384854,0,0.482354319504834,0.25462585178142,0.575392274901621,0,0,4.31304619582064,0,0,0.757736633841335,0.358794827043824,0.482443521363367,0.554259570499814,0,0,0,0,0,0,0,0,0,0,0.491589944147214,0.172684981865896,0,0,0.54390568381871,0,0,0.321101179975584,0,0,0,0,0,0,0,0,0,0.404810701674894,0.292255857911312,0,0,0,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0.377210159511796,0,0,0,0,0.356497378384721,0,1.05418608574999,0,0.680879211507576,0,0.258717367565509,0.428674070063185,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0.161464426695906,0.361877549568935,0.119372344003136,0.492422699235184,1.1659233465194,0.18542530201051,0.170870880797853,0.206386867963223,0,0,0,0,0,0.139951452323658,0,0.954670618015114,0.474503990371703,0.203319467126849,0.216010681643603,0,0,0,0,0,0.90730481304255,0,1.12738587736838,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0.308132871494482,0,0.358053391334963,0.596044064343795,0.721172697119813,0.147689527174577,0.201932899896295,0.228620419965,0.100826185136841,0.292373642219257,0.288635524920988,0.350630706544707,0.453460767230423,0.665957860122194,0.807424709485281,0.839423081820392,0,0,0.183151624267265,0.214368379079066,0,0.564751842617067,0,0,0.171853182343688,0.685082519770642,0,0,0.45032120322422,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0.412085900803307,0,0,0,0,0,0.188218760830661,0,0,0,0.135804113845862,0,0,0,0.409231043169689,0,0,0.249810577937946,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr11:115041341..115041354,+ | |||
}} |
Revision as of 18:44, 12 September 2013
Short description: | p@chr11:115041341..115041354, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:115041341..115041354, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.94e-09 | 25 |
brush border epithelial cell | 1.71e-07 | 6 |
gut absorptive cell | 1.71e-07 | 6 |
enterocyte | 1.71e-07 | 6 |
endodermal cell | 1.74e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.09e-18 | 31 |
mucosa | 1.06e-13 | 15 |
gastrointestinal system | 4.01e-11 | 47 |
organ component layer | 8.31e-10 | 24 |
intestinal mucosa | 1.27e-09 | 13 |
wall of intestine | 1.27e-09 | 13 |
gastrointestinal system mucosa | 1.27e-09 | 13 |
digestive system | 1.93e-07 | 116 |
digestive tract | 1.93e-07 | 116 |
primitive gut | 1.93e-07 | 116 |
endoderm-derived structure | 3.13e-07 | 118 |
endoderm | 3.13e-07 | 118 |
presumptive endoderm | 3.13e-07 | 118 |
small intestine | 7.42e-07 | 4 |
gut-associated lymphoid tissue | 8.69e-07 | 2 |
mucosa-associated lymphoid tissue | 8.69e-07 | 2 |
lymphoid tissue | 8.69e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.