FFCP PHASE1:Mm9::chr11:119777961..119777997,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=208092|HGNC=|UniProt=|association_with_transcript=-47bp_to_ENSMUST00000137055_5end|description=CAGE_peak_3_at_Chmp6_5end|id=chr11:119777961..119777997,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000682,2.29e-09,3;CL:0000349,5.24e-09,3;CL:0000351,5.24e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.27e-16,31;UBERON:0004923,1.98e-12,24;UBERON:0000344,1.09e-10,15;UBERON:0005631,3.63e-10,3;UBERON:0000478,3.63e-10,3;UBERON:0000158,3.63e-10,3;UBERON:0005409,1.02e-09,47;UBERON:0000358,5.24e-09,3;UBERON:0000307,5.24e-09,3;UBERON:0007010,5.24e-09,3;UBERON:0000331,7.16e-09,3;UBERON:0002116,7.16e-09,3;UBERON:0001204,7.16e-09,3;UBERON:0001168,7.16e-09,3;UBERON:0001987,2.29e-07,2;UBERON:0003124,2.29e-07,2;UBERON:0004340,2.29e-07,2;UBERON:0001242,3.46e-07,13;UBERON:0001262,3.46e-07,13;UBERON:0004786,3.46e-07,13;UBERON:0002108,9.50e-07,4|phase1_expression=0,3.83872948403297,3.18499467572675,0.90739263392049,0,1.34303417529512,0.467225281191051,0,0,0,0,0,0,0,0.333109761815663,0.607425802169478,0,0,0,0,0.595303031057488,0.198581902401771,0,2.3998863419011,2.06468352960453,5.7423196411502,2.15380998079537,2.58565479223067,2.47030445293286,1.26015064879965,3.76941868114018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573066879877513,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0,0.135005938331691,0,0.285650984403804,0.220868540951614,0.122490799214954,0.287536413054709,0.919218786610021,0,0,0,0,0,0,0,0,0,0.294628585473668,0.142371680799103,0.186399445825301,0.075726193333184,0.0755715601067855,1.44932244350839,1.72084775396277,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0.45673551887624,0.517875767294343,0.148442139064825,0.173485326766136,0,0.922461989024234,0.301445281105245,0.23517741427141,0.251333182659351,4.6967043869531,0,0,0,0.220841518460394,0.969750506270444,1.86391761218122,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.124406970610093,0.252722758433675,0,0.520481771850815,0.229902104433473,0,0,0.0680364991513279,0.2562274405697,0.187403449119458,0,0,0,0.175951124163949,0.43839146485515,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0.180062061461015,0.473489471170421,0,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0.660837565967596,2.11560453330835,0,0.232236671860439,0,1.21010114774006,0.444756087689741,1.90225626112559,1.42358718463353,3.78807595865225,2.01068167040216,1.59165177632921,1.75467678407208,0.898819408654221,0.216138049874694,0,0.569003702859245,0,0,0,0.775809948670503,0.771494018793504,2.84564417059158,2.21415221969403,3.767969468193,3.33172342588861,0,0,0,0.224862112384854,0,0.241177159752417,0.50925170356284,0,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0,0.37898282354097,0,0.169745085775188,0,0.167506257441816,0.476087281772027,0.780534591431195,0.945810864637146,0.44292937929755,0.318909537314974,0.491589944147214,0,0.289298117163023,0,0,0,0,0.160550589987792,0,0,0,0.315508219416257,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0,0.329940245945071,0,0,0.604647113929502,0,0,0.307435147943927,0.775284879504663,0,0,0.316036757935816,0,0,0,0,0.388076051348264,0.428674070063185,0.532020700926821,0.178368817602071,0.164549020602121,0,5.86679270159276,6.99045833850607,0,0,0,0.120625849856312,0.119372344003136,0,0.582961673259701,0,0.341741761595705,0.206386867963223,0,0,0.136694227721025,0,0.169978429993855,0,0,0,0,0,0.216010681643603,0.209088296014469,0,0.134864346384821,0.165306911450672,0.26175594198403,0.129614973291793,1.24267862617385,0,0,0.330916980914195,0,0.129159823477731,0,0,0,0.104859344425711,0,0.288030006257865,0.316011120628178,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0,0.147689527174577,0,0,0.100826185136841,0.194915761479505,0.192423683280659,0,0,2.66383144048878,1.79427713218951,3.02192309455341,0.19318959403219,0.563047426353546,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.486213434136588,0.419226325255965,0.367687016900028,0.222246727801615,0.412070114477788,0,0.252697211763798,0.25347929989024,0.377252682772152,0.0936415074698824,0.320125762024346,0.17230640686684,0.476293691283074,0.463537303779422,0,0.412085900803307,0.735994600671987,0,0.354951612318675,0,0,0.188218760830661,0.423073039458382,0.365855945745545,0.263069711437843,0.135804113845862,0,0.118635018124174,0.394017929502254,0.409231043169689,0.154936841185966,0,0.249810577937946,0.467863216890817,0.214871054048298,0,0,0.695603506861264|short_description=p3@Chmp6}} | ||
|EntrezGene=208092 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=-47bp_to_ENSMUST00000137055_5end | |||
|description=CAGE_peak_3_at_Chmp6_5end | |||
|id=chr11:119777961..119777997,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,2.29e-09,3;CL:0000349,5.24e-09,3;CL:0000351,5.24e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.27e-16,31;UBERON:0004923,1.98e-12,24;UBERON:0000344,1.09e-10,15;UBERON:0005631,3.63e-10,3;UBERON:0000478,3.63e-10,3;UBERON:0000158,3.63e-10,3;UBERON:0005409,1.02e-09,47;UBERON:0000358,5.24e-09,3;UBERON:0000307,5.24e-09,3;UBERON:0007010,5.24e-09,3;UBERON:0000331,7.16e-09,3;UBERON:0002116,7.16e-09,3;UBERON:0001204,7.16e-09,3;UBERON:0001168,7.16e-09,3;UBERON:0001987,2.29e-07,2;UBERON:0003124,2.29e-07,2;UBERON:0004340,2.29e-07,2;UBERON:0001242,3.46e-07,13;UBERON:0001262,3.46e-07,13;UBERON:0004786,3.46e-07,13;UBERON:0002108,9.50e-07,4 | |||
|phase1_expression=0,3.83872948403297,3.18499467572675,0.90739263392049,0,1.34303417529512,0.467225281191051,0,0,0,0,0,0,0,0.333109761815663,0.607425802169478,0,0,0,0,0.595303031057488,0.198581902401771,0,2.3998863419011,2.06468352960453,5.7423196411502,2.15380998079537,2.58565479223067,2.47030445293286,1.26015064879965,3.76941868114018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573066879877513,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0,0.135005938331691,0,0.285650984403804,0.220868540951614,0.122490799214954,0.287536413054709,0.919218786610021,0,0,0,0,0,0,0,0,0,0.294628585473668,0.142371680799103,0.186399445825301,0.075726193333184,0.0755715601067855,1.44932244350839,1.72084775396277,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0.45673551887624,0.517875767294343,0.148442139064825,0.173485326766136,0,0.922461989024234,0.301445281105245,0.23517741427141,0.251333182659351,4.6967043869531,0,0,0,0.220841518460394,0.969750506270444,1.86391761218122,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.124406970610093,0.252722758433675,0,0.520481771850815,0.229902104433473,0,0,0.0680364991513279,0.2562274405697,0.187403449119458,0,0,0,0.175951124163949,0.43839146485515,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0.180062061461015,0.473489471170421,0,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0.660837565967596,2.11560453330835,0,0.232236671860439,0,1.21010114774006,0.444756087689741,1.90225626112559,1.42358718463353,3.78807595865225,2.01068167040216,1.59165177632921,1.75467678407208,0.898819408654221,0.216138049874694,0,0.569003702859245,0,0,0,0.775809948670503,0.771494018793504,2.84564417059158,2.21415221969403,3.767969468193,3.33172342588861,0,0,0,0.224862112384854,0,0.241177159752417,0.50925170356284,0,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,0,0.37898282354097,0,0.169745085775188,0,0.167506257441816,0.476087281772027,0.780534591431195,0.945810864637146,0.44292937929755,0.318909537314974,0.491589944147214,0,0.289298117163023,0,0,0,0,0.160550589987792,0,0,0,0.315508219416257,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0,0.329940245945071,0,0,0.604647113929502,0,0,0.307435147943927,0.775284879504663,0,0,0.316036757935816,0,0,0,0,0.388076051348264,0.428674070063185,0.532020700926821,0.178368817602071,0.164549020602121,0,5.86679270159276,6.99045833850607,0,0,0,0.120625849856312,0.119372344003136,0,0.582961673259701,0,0.341741761595705,0.206386867963223,0,0,0.136694227721025,0,0.169978429993855,0,0,0,0,0,0.216010681643603,0.209088296014469,0,0.134864346384821,0.165306911450672,0.26175594198403,0.129614973291793,1.24267862617385,0,0,0.330916980914195,0,0.129159823477731,0,0,0,0.104859344425711,0,0.288030006257865,0.316011120628178,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0,0.147689527174577,0,0,0.100826185136841,0.194915761479505,0.192423683280659,0,0,2.66383144048878,1.79427713218951,3.02192309455341,0.19318959403219,0.563047426353546,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.486213434136588,0.419226325255965,0.367687016900028,0.222246727801615,0.412070114477788,0,0.252697211763798,0.25347929989024,0.377252682772152,0.0936415074698824,0.320125762024346,0.17230640686684,0.476293691283074,0.463537303779422,0,0.412085900803307,0.735994600671987,0,0.354951612318675,0,0,0.188218760830661,0.423073039458382,0.365855945745545,0.263069711437843,0.135804113845862,0,0.118635018124174,0.394017929502254,0.409231043169689,0.154936841185966,0,0.249810577937946,0.467863216890817,0.214871054048298,0,0,0.695603506861264 | |||
|short_description=p3@Chmp6 | |||
}} |
Revision as of 19:03, 12 September 2013
Short description: | p3@Chmp6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Chmp6_5end |
Coexpression cluster: | NA |
Association with transcript: | -47bp_to_ENSMUST00000137055_5end |
EntrezGene: | Chmp6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 2.29e-09 | 3 |
extraembryonic cell | 5.24e-09 | 3 |
trophoblast cell | 5.24e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.27e-16 | 31 |
organ component layer | 1.98e-12 | 24 |
mucosa | 1.09e-10 | 15 |
extraembryonic membrane | 3.63e-10 | 3 |
extraembryonic structure | 3.63e-10 | 3 |
membranous layer | 3.63e-10 | 3 |
gastrointestinal system | 1.02e-09 | 47 |
blastocyst | 5.24e-09 | 3 |
blastula | 5.24e-09 | 3 |
cleaving embryo | 5.24e-09 | 3 |
ileal mucosa | 7.16e-09 | 3 |
ileum | 7.16e-09 | 3 |
mucosa of small intestine | 7.16e-09 | 3 |
wall of small intestine | 7.16e-09 | 3 |
placenta | 2.29e-07 | 2 |
chorion | 2.29e-07 | 2 |
allantois | 2.29e-07 | 2 |
intestinal mucosa | 3.46e-07 | 13 |
wall of intestine | 3.46e-07 | 13 |
gastrointestinal system mucosa | 3.46e-07 | 13 |
small intestine | 9.50e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.