FFCP PHASE1:Hg19::chr2:74141926..74141963,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C48|description=CAGE_peak_at_chr2:74141926..74141963,+|id=chr2:74141926..74141963,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002594;7.13e-16;4!CL:0002622;4.10e-12;3|ontology_enrichment_celltype_v019_2=CL:0002594,4.63e-16,4;CL:0002622,3.58e-12,3|ontology_enrichment_development_v019=UBERON:0007297;1.38e-09;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003101!7.97e-08!22;UBERON:0000079!7.97e-08!22|ontology_enrichment_uberon_v019=UBERON:0000160;2.29e-17;17!UBERON:0005409;2.40e-16;22!UBERON:0004921;3.61e-16;33!UBERON:0001310;7.13e-16;4!UBERON:0006947;2.06e-13;3!UBERON:0004054;2.06e-13;3!UBERON:0003101;1.47e-10;22!UBERON:0000079;1.47e-10;22!UBERON:0005904;3.64e-10;4!UBERON:0000059;1.77e-09;11!UBERON:0004175;1.41e-08;21!UBERON:0001829;2.01e-08;2!UBERON:0004089;2.01e-08;2!UBERON:0003937;4.12e-08;12!UBERON:0005399;4.12e-08;12!UBERON:0002108;5.38e-08;4!UBERON:0001155;1.12e-07;9!UBERON:0010260;4.23e-07;9!UBERON:0001555;5.60e-07;54|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.34e-17,17;UBERON:0001310,4.63e-16,4;UBERON:0005409,3.27e-14,25;UBERON:0006947,2.07e-13,3;UBERON:0004054,2.07e-13,3;UBERON:0003101,1.36e-10,22;UBERON:0000079,1.36e-10,22;UBERON:0005156,3.41e-10,59;UBERON:0000990,3.41e-10,59;UBERON:0005904,3.64e-10,4;UBERON:0001046,1.49e-09,19;UBERON:0000059,1.69e-09,11;UBERON:0007023,2.14e-09,114;UBERON:0001829,2.35e-08,2;UBERON:0004089,3.32e-08,2;UBERON:0003937,3.76e-08,12;UBERON:0005399,3.76e-08,12;UBERON:0003064,4.42e-08,28;UBERON:0002108,5.72e-08,4;UBERON:0001155,1.07e-07,9;UBERON:0010260,3.53e-07,9;UBERON:0004175,4.84e-07,25;UBERON:0000162,6.60e-07,14;UBERON:0001353,6.60e-07,14;UBERON:0000163,6.60e-07,14;UBERON:0006866,6.60e-07,14;UBERON:0000164,6.60e-07,14;UBERON:0000931,6.60e-07,14;UBERON:0004921,7.53e-07,118|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0.730310090387373,0.975865597581014,0,0,0.940364164434263,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0.436194716338694,0,0,0,0,0,0.575384784644301,0,0,0.689491361473237,0.645484683583826,0,0.188242339542605,0.272906150057846,0,0.612167784741805,0,1.91801137739712,0,0,0.426224750532694,0.290209238628584,0,0,0,0,0.217188844705117,0.605399502633369,0.368277635987565,0.632924774881769,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0,0.493313713811028,0,0,0,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.523916301990851,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,1.06748995729705,0.24666754841716,0,0,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0.989067717114227,0,0,0,0,0,0,0.30648779579902,0,0,0,0.427114777637135,0,0,0,0,0,0,0.0974370051611986,0,0,0.323292113637624,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0.252320850875628,0,1.56449532329816,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0.110293972732394,0.217879444092406,0.474541238222193,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,2.10833939483032,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831883446123229,0.713715955188647,0,0.117141414992713,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0.173767228936166,0,0.343143423810856,0,0.215714200818617,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0.200506470303285,0,1.49258782613989,1.27463817604702,3.40923478894503,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0.267096106940212,0,0,0.127612712494584,0,1.39453664789186,0,0,0,0,0,0.37064843820784,0.286249773483982,0,0,0.762520775695299,0,0,0,0,0,0.54907405947211,0,0,0,0,0.48763373908959,0,0,0.409499734223957,0.565621727814851,0,0,0,0,0,0,1.82619339266434,2.78841148289775,2.81695602532241,0.143411352204052,0.0982490410131212,3.21003946333125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19172787076177,4.42054264849836,0,0.20453736500431,0,0.622079175323615,0.0898683511473268,0,0,16.1775185244571,0,1.11136990144637,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0.219385397153973,0,0,2.5393585306253,0,0.23056390438806,0,0.108647371922008,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,16.9194528283346,3.62676014463691,23.2191455074778,0.296521128680622,0,0,0.067401132980677,0,0,0,0,0,5.91876604274086,10.8891644443797,0,0.189559738885464,0,0.103688191397247,0,0,0,0,0,0,0,0,0,4.36816670605075,0,0,0,0,12.3176050940293,0,0.677942222341597,0,0,0,0,0,9.39193176853151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0.858452096273142,0.223171457441873,0,0,0,0,0,0,0,0.0846733320657845,0,0,0.321506296930038,0,0,0,0,0.0607495566580247,0,0.157611414598396,0,0,0,0,0.714695326373367,0,0.25426853765475,0,4.32110745600634,1.30634944043764,0,0,0,0.113312091520126,0,0,0,0,0,0,0.320362237703084,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0.889811221596536,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0,2.60872530905867,0.150257608997218,0.761610424337591,0,2.18218391043071,0,0.464033759878494,7.16572599657509,1.20008329398946,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.265729680626726,0.327130788511688,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05802783107205,10.1061007526556,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0.376051641746286,0,0,0,0,0,0,0,0,0,0,1.09651553371436,11.4128571029538,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,3.9246546425257,0,0,17.3500156896804,0,0,0,0,0,0,3.20684545892101,0.207216164163037,0,0,0,0,0,27.9435453126013,0,0,0,0,0,0,1.29485767437579,0,0,0,0,0,0,0.11294608203896,0,0,2.16087642702245,6.99390593612663,0,19.1215690968046,0,0,0,0,0,0.0939839179798536,0,0.0999411559249289,0,0,0,5.11235471772562,1.37618785021362,0,0,0,0,10.580536810308,0,0,0,0,0,0,0.101988829741982,0,0,0.250707539292375,0.378893491091197,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0.342233301085281,0,0.358611026963382,0,0,0,0,0,18.7712753922763,3.30051899293739,4.47585796147312,0.665756774185513,0.805095174364105,0|short_description=p@chr2:74141926..74141963,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_at_chr2:74141926..74141963,+ | |||
|id=chr2:74141926..74141963,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002594;7.13e-16;4!CL:0002622;4.10e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002594,4.63e-16,4;CL:0002622,3.58e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.38e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003101!7.97e-08!22;UBERON:0000079!7.97e-08!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.29e-17;17!UBERON:0005409;2.40e-16;22!UBERON:0004921;3.61e-16;33!UBERON:0001310;7.13e-16;4!UBERON:0006947;2.06e-13;3!UBERON:0004054;2.06e-13;3!UBERON:0003101;1.47e-10;22!UBERON:0000079;1.47e-10;22!UBERON:0005904;3.64e-10;4!UBERON:0000059;1.77e-09;11!UBERON:0004175;1.41e-08;21!UBERON:0001829;2.01e-08;2!UBERON:0004089;2.01e-08;2!UBERON:0003937;4.12e-08;12!UBERON:0005399;4.12e-08;12!UBERON:0002108;5.38e-08;4!UBERON:0001155;1.12e-07;9!UBERON:0010260;4.23e-07;9!UBERON:0001555;5.60e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.34e-17,17;UBERON:0001310,4.63e-16,4;UBERON:0005409,3.27e-14,25;UBERON:0006947,2.07e-13,3;UBERON:0004054,2.07e-13,3;UBERON:0003101,1.36e-10,22;UBERON:0000079,1.36e-10,22;UBERON:0005156,3.41e-10,59;UBERON:0000990,3.41e-10,59;UBERON:0005904,3.64e-10,4;UBERON:0001046,1.49e-09,19;UBERON:0000059,1.69e-09,11;UBERON:0007023,2.14e-09,114;UBERON:0001829,2.35e-08,2;UBERON:0004089,3.32e-08,2;UBERON:0003937,3.76e-08,12;UBERON:0005399,3.76e-08,12;UBERON:0003064,4.42e-08,28;UBERON:0002108,5.72e-08,4;UBERON:0001155,1.07e-07,9;UBERON:0010260,3.53e-07,9;UBERON:0004175,4.84e-07,25;UBERON:0000162,6.60e-07,14;UBERON:0001353,6.60e-07,14;UBERON:0000163,6.60e-07,14;UBERON:0006866,6.60e-07,14;UBERON:0000164,6.60e-07,14;UBERON:0000931,6.60e-07,14;UBERON:0004921,7.53e-07,118 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0.730310090387373,0.975865597581014,0,0,0.940364164434263,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0.436194716338694,0,0,0,0,0,0.575384784644301,0,0,0.689491361473237,0.645484683583826,0,0.188242339542605,0.272906150057846,0,0.612167784741805,0,1.91801137739712,0,0,0.426224750532694,0.290209238628584,0,0,0,0,0.217188844705117,0.605399502633369,0.368277635987565,0.632924774881769,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0,0.493313713811028,0,0,0,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.523916301990851,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,1.06748995729705,0.24666754841716,0,0,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0.989067717114227,0,0,0,0,0,0,0.30648779579902,0,0,0,0.427114777637135,0,0,0,0,0,0,0.0974370051611986,0,0,0.323292113637624,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0.252320850875628,0,1.56449532329816,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0.110293972732394,0.217879444092406,0.474541238222193,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,2.10833939483032,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831883446123229,0.713715955188647,0,0.117141414992713,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0.173767228936166,0,0.343143423810856,0,0.215714200818617,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0.200506470303285,0,1.49258782613989,1.27463817604702,3.40923478894503,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0.267096106940212,0,0,0.127612712494584,0,1.39453664789186,0,0,0,0,0,0.37064843820784,0.286249773483982,0,0,0.762520775695299,0,0,0,0,0,0.54907405947211,0,0,0,0,0.48763373908959,0,0,0.409499734223957,0.565621727814851,0,0,0,0,0,0,1.82619339266434,2.78841148289775,2.81695602532241,0.143411352204052,0.0982490410131212,3.21003946333125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19172787076177,4.42054264849836,0,0.20453736500431,0,0.622079175323615,0.0898683511473268,0,0,16.1775185244571,0,1.11136990144637,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0.219385397153973,0,0,2.5393585306253,0,0.23056390438806,0,0.108647371922008,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,16.9194528283346,3.62676014463691,23.2191455074778,0.296521128680622,0,0,0.067401132980677,0,0,0,0,0,5.91876604274086,10.8891644443797,0,0.189559738885464,0,0.103688191397247,0,0,0,0,0,0,0,0,0,4.36816670605075,0,0,0,0,12.3176050940293,0,0.677942222341597,0,0,0,0,0,9.39193176853151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0.858452096273142,0.223171457441873,0,0,0,0,0,0,0,0.0846733320657845,0,0,0.321506296930038,0,0,0,0,0.0607495566580247,0,0.157611414598396,0,0,0,0,0.714695326373367,0,0.25426853765475,0,4.32110745600634,1.30634944043764,0,0,0,0.113312091520126,0,0,0,0,0,0,0.320362237703084,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0.889811221596536,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0,2.60872530905867,0.150257608997218,0.761610424337591,0,2.18218391043071,0,0.464033759878494,7.16572599657509,1.20008329398946,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.265729680626726,0.327130788511688,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05802783107205,10.1061007526556,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0.376051641746286,0,0,0,0,0,0,0,0,0,0,1.09651553371436,11.4128571029538,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,3.9246546425257,0,0,17.3500156896804,0,0,0,0,0,0,3.20684545892101,0.207216164163037,0,0,0,0,0,27.9435453126013,0,0,0,0,0,0,1.29485767437579,0,0,0,0,0,0,0.11294608203896,0,0,2.16087642702245,6.99390593612663,0,19.1215690968046,0,0,0,0,0,0.0939839179798536,0,0.0999411559249289,0,0,0,5.11235471772562,1.37618785021362,0,0,0,0,10.580536810308,0,0,0,0,0,0,0.101988829741982,0,0,0.250707539292375,0.378893491091197,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0.342233301085281,0,0.358611026963382,0,0,0,0,0,18.7712753922763,3.30051899293739,4.47585796147312,0.665756774185513,0.805095174364105,0 | |||
|short_description=p@chr2:74141926..74141963,+ | |||
}} |
Revision as of 19:45, 12 September 2013
Short description: | p@chr2:74141926..74141963, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:74141926..74141963, + |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical artery | 4.63e-16 | 4 |
prostate stromal cell | 3.58e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.34e-17 | 17 |
umbilical artery | 4.63e-16 | 4 |
gastrointestinal system | 3.27e-14 | 25 |
male genital duct | 2.07e-13 | 3 |
internal male genitalia | 2.07e-13 | 3 |
male organism | 1.36e-10 | 22 |
male reproductive system | 1.36e-10 | 22 |
reproductive structure | 3.41e-10 | 59 |
reproductive system | 3.41e-10 | 59 |
duct of male reproductive system | 3.64e-10 | 4 |
hindgut | 1.49e-09 | 19 |
large intestine | 1.69e-09 | 11 |
adult organism | 2.14e-09 | 114 |
major salivary gland | 2.35e-08 | 2 |
midface | 3.32e-08 | 2 |
sex gland | 3.76e-08 | 12 |
male reproductive gland | 3.76e-08 | 12 |
intermediate mesoderm | 4.42e-08 | 28 |
small intestine | 5.72e-08 | 4 |
colon | 1.07e-07 | 9 |
umbilical blood vessel | 3.53e-07 | 9 |
internal genitalia | 4.84e-07 | 25 |
cloaca | 6.60e-07 | 14 |
anal region | 6.60e-07 | 14 |
embryonic cloaca | 6.60e-07 | 14 |
terminal part of digestive tract | 6.60e-07 | 14 |
primitive urogenital sinus | 6.60e-07 | 14 |
proctodeum | 6.60e-07 | 14 |
subdivision of digestive tract | 7.53e-07 | 118 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.