FFCP PHASE1:Mm9::chr11:5321565..5321569,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2681|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:5321565..5321569,-|id=chr11:5321565..5321569,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000077!1.12e-10!97;UBERON:0001041!1.35e-10!92;UBERON:0001048!2.30e-10!147;UBERON:0003104!5.45e-10!131;UBERON:0009142!5.45e-10!131;UBERON:0001004!1.21e-09!42;UBERON:0000065!4.12e-09!41;UBERON:0000926!9.53e-09!193;UBERON:0004120!9.53e-09!193;UBERON:0006603!9.53e-09!193;UBERON:0005911!6.52e-08!69;UBERON:0004921!1.92e-07!126;UBERON:0004185!1.92e-07!126;UBERON:0009569!2.27e-07!66;UBERON:0001007!4.29e-07!128;UBERON:0001555!4.29e-07!128;UBERON:0007026!4.29e-07!128;UBERON:0003408!6.64e-07!24;UBERON:0005057!6.83e-07!51;UBERON:0000466!6.89e-07!79;UBERON:0004119!8.29e-07!130;UBERON:0000925!8.29e-07!130;UBERON:0006595!8.29e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0001004,2.32e-11,42;UBERON:0001041,3.44e-11,80;UBERON:0000065,9.98e-11,41;UBERON:0001048,4.24e-10,134;UBERON:0005911,3.08e-09,69;UBERON:0003408,1.95e-08,24;UBERON:0000153,4.82e-08,43;UBERON:0002370,8.62e-08,23;UBERON:0000974,8.62e-08,23;UBERON:0004807,8.62e-08,23;UBERON:0005058,8.62e-08,23;UBERON:0003351,8.62e-08,23;UBERON:0009113,8.62e-08,23;UBERON:0003295,8.62e-08,23;UBERON:0009722,8.62e-08,23;UBERON:0005562,8.62e-08,23;UBERON:0007690,8.62e-08,23;UBERON:0006562,1.01e-07,24;UBERON:0001557,1.01e-07,24;UBERON:0001042,1.01e-07,24;UBERON:0008814,1.01e-07,24;UBERON:0009145,1.01e-07,24;UBERON:0007811,2.12e-07,36;UBERON:0004921,2.63e-07,114;UBERON:0001007,7.87e-07,116;UBERON:0001555,7.87e-07,116;UBERON:0007026,7.87e-07,116|phase1_expression=0.80074423552397,0,0,0,0,0,0.233612640595526,2.45334314538995,2.956563165185,2.10658073689794,2.39705155515707,2.47293692885543,2.73921167889929,2.18551006047494,0.333109761815663,0.809901069559304,0,0.473193248037357,0.685572168028694,1.69755860719212,1.36069264241712,0.496454756004426,1.04479915655574,0.319984845586813,0.45881856213434,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0.221730510655305,0.635030673459631,0,0,1.44425809875637,1.16364251750945,1.02084678131185,0,0,0.523523743973798,0,0,0,0.629484089877886,0.608261587317087,0.367093504323363,0,0,0,0,0,0,0,8.70434570413613,5.37750078627942,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0.220868540951614,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0.559198337475902,0.075726193333184,0.226714680320357,2.31891590961342,0,0,1.07940638327563,0,0,0.421333260395256,0,0.519572009205738,0,0.14084341977668,0,0,0,0.216491041011214,0,1.01104889002957,0.68510327831436,1.03575153458869,1.63286352971307,0.346970653532272,0.608930956624282,0.691846491768175,0.904335843315735,2.11659672844269,1.0053327306374,0.494389935468748,0.722996784599558,0,0.485300549842228,0.662524555381181,0.969750506270444,0,1.17112318804619,1.25668024088073,1.02182822083437,1.31796636956512,0.599902730993408,2.1601938602421,1.3481157546434,0.915001205637253,0.628271760564322,1.04294592115366,0.255715457330331,0.41557608911912,0.811206315338788,1.2220723662038,1.24406970610093,4.29628689337247,2.31486041475121,1.56144531555244,0.459804208866946,0.180062129805349,0.60281927134286,1.7009124787832,2.0498195245576,1.96773621575431,2.84573707812917,1.07783996466421,1.70195472151037,0.879755620819744,0,4.72680323683516,2.089512999133,3.08673204611915,1.59227413454795,0,0,0.284163499395593,0.414251545071004,2.57978665979206,0,1.18372367792605,1.77087808572663,0.617068451549513,0.930135779001631,1.60964040839772,1.28441876603886,1.31647879930784,1.64167464079095,0.891756905004413,1.60819986167866,0.439100230582101,0.134206418760372,0.210289948564127,0.92614151141356,0.330418782983798,0.264450566663544,0.426576501070468,1.39342003116263,0.38660238396628,1.00841762311671,1.11189021922435,0.951128130562796,1.89811624617805,0.329397909448022,1.00534083520108,1.1937388322469,0.974820435595601,1.79763881730844,1.08069024937347,0.796565093017469,0.189667900953082,2.97046132785295,2.25415471346161,3.05476991767971,2.13347735884388,1.82353131714828,2.02356918797623,2.95220295959204,1.56998727841375,0.863780147452604,0.889357881261447,0.83422552858047,0.982794975566015,1.57403478669398,0.811440485554012,1.20588579876208,0.763877555344259,2.30156909960649,3.08056930872567,3.0201755450689,20.1275489138296,2.60498663367952,3.74445207737473,2.27320990152401,2.15276896226295,2.8946611281802,0.923765950833023,1.70542270593436,0.488894929326078,3.05541154395339,3.75504397261603,2.34508760418542,3.33261097240419,3.70753930929818,2.67979744980525,4.87222317227305,1.2756381492599,2.45794972073607,2.93564469172023,2.31438493730419,0,0,0.491764273019036,0.827810238914197,0,0,0,1.51482556322624,0.94652465824877,1.17131623288992,1.07711698866399,0.238968797952552,0.668396022247182,0.283076530788832,0.809621403349789,0,0,1.60660658210904,1.56134093729095,0.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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2681 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:5321565..5321569,- | |||
|id=chr11:5321565..5321569,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000077!1.12e-10!97;UBERON:0001041!1.35e-10!92;UBERON:0001048!2.30e-10!147;UBERON:0003104!5.45e-10!131;UBERON:0009142!5.45e-10!131;UBERON:0001004!1.21e-09!42;UBERON:0000065!4.12e-09!41;UBERON:0000926!9.53e-09!193;UBERON:0004120!9.53e-09!193;UBERON:0006603!9.53e-09!193;UBERON:0005911!6.52e-08!69;UBERON:0004921!1.92e-07!126;UBERON:0004185!1.92e-07!126;UBERON:0009569!2.27e-07!66;UBERON:0001007!4.29e-07!128;UBERON:0001555!4.29e-07!128;UBERON:0007026!4.29e-07!128;UBERON:0003408!6.64e-07!24;UBERON:0005057!6.83e-07!51;UBERON:0000466!6.89e-07!79;UBERON:0004119!8.29e-07!130;UBERON:0000925!8.29e-07!130;UBERON:0006595!8.29e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,2.32e-11,42;UBERON:0001041,3.44e-11,80;UBERON:0000065,9.98e-11,41;UBERON:0001048,4.24e-10,134;UBERON:0005911,3.08e-09,69;UBERON:0003408,1.95e-08,24;UBERON:0000153,4.82e-08,43;UBERON:0002370,8.62e-08,23;UBERON:0000974,8.62e-08,23;UBERON:0004807,8.62e-08,23;UBERON:0005058,8.62e-08,23;UBERON:0003351,8.62e-08,23;UBERON:0009113,8.62e-08,23;UBERON:0003295,8.62e-08,23;UBERON:0009722,8.62e-08,23;UBERON:0005562,8.62e-08,23;UBERON:0007690,8.62e-08,23;UBERON:0006562,1.01e-07,24;UBERON:0001557,1.01e-07,24;UBERON:0001042,1.01e-07,24;UBERON:0008814,1.01e-07,24;UBERON:0009145,1.01e-07,24;UBERON:0007811,2.12e-07,36;UBERON:0004921,2.63e-07,114;UBERON:0001007,7.87e-07,116;UBERON:0001555,7.87e-07,116;UBERON:0007026,7.87e-07,116 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0.233612640595526,2.45334314538995,2.956563165185,2.10658073689794,2.39705155515707,2.47293692885543,2.73921167889929,2.18551006047494,0.333109761815663,0.809901069559304,0,0.473193248037357,0.685572168028694,1.69755860719212,1.36069264241712,0.496454756004426,1.04479915655574,0.319984845586813,0.45881856213434,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0.221730510655305,0.635030673459631,0,0,1.44425809875637,1.16364251750945,1.02084678131185,0,0,0.523523743973798,0,0,0,0.629484089877886,0.608261587317087,0.367093504323363,0,0,0,0,0,0,0,8.70434570413613,5.37750078627942,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0.220868540951614,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0.559198337475902,0.075726193333184,0.226714680320357,2.31891590961342,0,0,1.07940638327563,0,0,0.421333260395256,0,0.519572009205738,0,0.14084341977668,0,0,0,0.216491041011214,0,1.01104889002957,0.68510327831436,1.03575153458869,1.63286352971307,0.346970653532272,0.608930956624282,0.691846491768175,0.904335843315735,2.11659672844269,1.0053327306374,0.494389935468748,0.722996784599558,0,0.485300549842228,0.662524555381181,0.969750506270444,0,1.17112318804619,1.25668024088073,1.02182822083437,1.31796636956512,0.599902730993408,2.1601938602421,1.3481157546434,0.915001205637253,0.628271760564322,1.04294592115366,0.255715457330331,0.41557608911912,0.811206315338788,1.2220723662038,1.24406970610093,4.29628689337247,2.31486041475121,1.56144531555244,0.459804208866946,0.180062129805349,0.60281927134286,1.7009124787832,2.0498195245576,1.96773621575431,2.84573707812917,1.07783996466421,1.70195472151037,0.879755620819744,0,4.72680323683516,2.089512999133,3.08673204611915,1.59227413454795,0,0,0.284163499395593,0.414251545071004,2.57978665979206,0,1.18372367792605,1.77087808572663,0.617068451549513,0.930135779001631,1.60964040839772,1.28441876603886,1.31647879930784,1.64167464079095,0.891756905004413,1.60819986167866,0.439100230582101,0.134206418760372,0.210289948564127,0.92614151141356,0.330418782983798,0.264450566663544,0.426576501070468,1.39342003116263,0.38660238396628,1.00841762311671,1.11189021922435,0.951128130562796,1.89811624617805,0.329397909448022,1.00534083520108,1.1937388322469,0.974820435595601,1.79763881730844,1.08069024937347,0.796565093017469,0.189667900953082,2.97046132785295,2.25415471346161,3.05476991767971,2.13347735884388,1.82353131714828,2.02356918797623,2.95220295959204,1.56998727841375,0.863780147452604,0.889357881261447,0.83422552858047,0.982794975566015,1.57403478669398,0.811440485554012,1.20588579876208,0.763877555344259,2.30156909960649,3.08056930872567,3.0201755450689,20.1275489138296,2.60498663367952,3.74445207737473,2.27320990152401,2.15276896226295,2.8946611281802,0.923765950833023,1.70542270593436,0.488894929326078,3.05541154395339,3.75504397261603,2.34508760418542,3.33261097240419,3.70753930929818,2.67979744980525,4.87222317227305,1.2756381492599,2.45794972073607,2.93564469172023,2.31438493730419,0,0,0.491764273019036,0.827810238914197,0,0,0,1.51482556322624,0.94652465824877,1.17131623288992,1.07711698866399,0.238968797952552,0.668396022247182,0.283076530788832,0.809621403349789,0,0,1.60660658210904,1.56134093729095,0.35613120733451,1.79175655288934,1.81467135269789,0,0.971122544619926,1.51161778482376,0.188605079755898,0.295301892880773,0.614870295887855,1.55056975900933,3.99887102425256,2.49548164869305,1.26414703174326,1.05418608574999,0,1.36175842301515,0.720244376125241,0.129358683782755,0.643011105094777,0.709360934569094,0.356737635204141,0.493647061806363,0,0.704015124191131,0.21183207086382,0.882113592219848,1.15420377059036,5.16686165426898,5.66941494324665,4.8942661041286,5.41664969158702,2.04036585640896,0.18542530201051,0.854354403989263,0.619160603889667,0.370389054739423,1.69531611304222,2.05041341581538,1.14389086603261,1.35982743995084,0.419854356970974,1.52019971184866,0.954670618015114,0.632671987162271,1.21991680276109,0.540026704109006,2.71814784818809,0.655087691238533,3.37160865962052,1.98368293740806,2.09404753587224,1.42576470620972,4.34937519160848,1.12738587736838,1.19613236835183,0.66183396182839,0.777804753376191,0.258319646955462,2.19642963138012,2.11243029562357,2.604087696879,2.09718688851422,2.17425708743405,1.44015003128933,2.8441000856536,1.62180172232131,0.821687657318618,2.20865399062252,1.25318686967237,2.18549490259391,4.20684073319891,4.43068581523732,4.4425237977185,3.65792671943999,5.04130925684203,3.60594158737084,4.04089734889384,5.49321440253374,1.13365191807606,0,0.448569283047378,0.167884616364078,1.9318959403219,0.563047426353546,0.73260649706906,2.35805216986972,3.51100472824754,2.25900737046827,0.460325236507177,0,1.3748254587495,0,0,0,0,0,0,0.207574695168353,1.59609949360412,1.70733605754134,3.16038732188782,0.209613162627982,0.183843508450014,1.11123363900808,0.618105171716683,1.28367683836726,1.26348605881899,1.2673964994512,0.943131706930381,1.31098110457835,1.7927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| |||
|short_description=p@chr11:5321565..5321569,- | |||
}} |
Revision as of 19:56, 12 September 2013
Short description: | p@chr11:5321565..5321569, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:5321565..5321569, - |
Coexpression cluster: | MCL_coexpression_mm9:2681 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory system | 2.32e-11 | 42 |
foregut | 3.44e-11 | 80 |
respiratory tract | 9.98e-11 | 41 |
primordium | 4.24e-10 | 134 |
endo-epithelium | 3.08e-09 | 69 |
gland of gut | 1.95e-08 | 24 |
anterior region of body | 4.82e-08 | 43 |
thymus | 8.62e-08 | 23 |
neck | 8.62e-08 | 23 |
respiratory system epithelium | 8.62e-08 | 23 |
hemolymphoid system gland | 8.62e-08 | 23 |
pharyngeal epithelium | 8.62e-08 | 23 |
thymic region | 8.62e-08 | 23 |
pharyngeal gland | 8.62e-08 | 23 |
entire pharyngeal arch endoderm | 8.62e-08 | 23 |
thymus primordium | 8.62e-08 | 23 |
early pharyngeal endoderm | 8.62e-08 | 23 |
pharynx | 1.01e-07 | 24 |
upper respiratory tract | 1.01e-07 | 24 |
chordate pharynx | 1.01e-07 | 24 |
pharyngeal arch system | 1.01e-07 | 24 |
pharyngeal region of foregut | 1.01e-07 | 24 |
craniocervical region | 2.12e-07 | 36 |
subdivision of digestive tract | 2.63e-07 | 114 |
digestive system | 7.87e-07 | 116 |
digestive tract | 7.87e-07 | 116 |
primitive gut | 7.87e-07 | 116 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.