FFCP PHASE1:Mm9::chr11:54723346..54723358,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=206|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:54723346..54723358,+|id=chr11:54723346..54723358,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003103!1.70e-11!43;UBERON:0007100!2.65e-09!18;UBERON:0000948!2.65e-09!18;UBERON:0005498!2.65e-09!18;UBERON:0004140!2.65e-09!18;UBERON:0009881!2.65e-09!18;UBERON:0004141!2.65e-09!18;UBERON:0003084!2.65e-09!18;UBERON:0007005!2.65e-09!18;UBERON:0004139!2.65e-09!18;UBERON:0004291!2.65e-09!18;UBERON:0004872!2.42e-07!33|ontology_enrichment_uberon_v019_2=UBERON:0001008,2.92e-10,19;UBERON:0003103,3.13e-10,43;UBERON:0007100,9.14e-10,18;UBERON:0000948,9.14e-10,18;UBERON:0005498,9.14e-10,18;UBERON:0004140,9.14e-10,18;UBERON:0009881,9.14e-10,18;UBERON:0004141,9.14e-10,18;UBERON:0003084,9.14e-10,18;UBERON:0007005,9.14e-10,18;UBERON:0004139,9.14e-10,18;UBERON:0004291,9.14e-10,18;UBERON:0006554,1.45e-09,18;UBERON:0004535,2.04e-08,23;UBERON:0001009,2.04e-08,23;UBERON:0004872,5.87e-08,33;UBERON:0002113,2.77e-07,14;UBERON:0003918,2.77e-07,14;UBERON:0011143,2.77e-07,14;UBERON:0005095,2.77e-07,14;UBERON:0007687,2.77e-07,14|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0.65407546914134,1.75748946187577,1.74986909166855,0.699932108126813,0,0,0,0,11.5766746216176,28.3668105539369,25.2679325215947,0,0,0,0.677689064138264,0.889294796111139,0,3.9554654502679,2.8419204597844,0.599200221036809,0.384218305321555,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0.510749352340751,0,0.395658863190582,0.0914876436024097,0,0,2.25105044012672,0.45839474333043,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,4.21333260395256,0,0,0.35333957451034,0,0,0,0,0.216491041011214,0.253359865475099,0,8.22123933977232,1.03575153458869,0.593768556259299,0,0,0,0.150722640552623,0.470354828542819,0.502666365318702,30.6521759990624,15.6167305473505,1.76922110389975,0.647067399789637,0.662524555381181,2.90925151881133,0,0,0,0.255457055208591,0,0,0,0.149790639404823,0,0,0,0,0,0,0.611036183101898,1.49288364732112,8.33985102831127,0.420883711772948,0.130120442962704,0.229902104433473,0.180062129805349,0,0.0680364991513279,0,0,0,0.431135985865684,0,0,0,0.556094498451196,0.348252166522167,0,0,0,0.257347907114715,0,3.72826390563903,1.87620847984877,2.70093092191522,1.18372367792605,1.96764231747404,1.3884040159864,1.39520366850245,1.07309360559848,1.5179494507732,0.987359099480883,0.656669856316381,0.486412857275134,0.584799949701329,1.53685080703735,0.671032093801859,0,0,0.330418782983798,0,0,0,0.128867461322093,0.80673409849337,1.55664630691409,11.223311940641,0,19.7638745668813,15.3314477368164,12.1363447945102,18.5215882763164,0,0.216138049874694,0.199141273254367,0.189667900953082,0,0,1.22190796707189,2.32742984601151,6.10181633045771,14.3546939272064,44.2830443938806,45.6866298018401,54.1713549616704,0,0.166845105716094,0,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0.324270453550071,0,1.43768206527355,0,0,0.252578877947112,0,0,4.80358294433172,0.189491411770485,0.325929952884052,0.339490171550376,0.469380496577004,0.670025029767263,1.42826184531608,1.95133647857799,0,0.44292937929755,0.797273843287435,2.78567635016755,1.89953480052485,3.18227928879325,3.01582567878545,0.54390568381871,0.983528546038072,1.10374698521893,0.160550589987792,0,0,0.504941854408746,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,2.6968616189571,0,0.488660878060728,0.989820737835213,0,0,0.302323556964751,0.188605079755898,0,0,0.775284879504663,0,0,0,1.05418608574999,0,2.04263763452273,0,0,0,0,0.713475270408282,0.164549020602121,1.522324745573,29.0992917999001,8.68511490541663,1.10264199027481,1.15420377059036,0,0.0603129249281559,0.119372344003136,0,3.49777003955821,0.370850604021019,0.341741761595705,0,0.370389054739423,0.188368457004691,0,0.228778173206523,0,0,0,4.77335309007557,0.158167996790568,0,0.108005340821801,0.418176592028937,1.09181281873089,0.134864346384821,0.330613822901344,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0.576060012515731,0.316011120628178,0,0.205421914329655,0,0.179026695667481,0,0.120195449519969,0.147689527174577,0,0,0,0.292373642219257,0,0.233753804363138,0.453460767230423,0,0.358855426437903,0,0.386379188064381,55.5540127335499,0.915758121336325,1.07184189539533,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.341467211508268,1.21553358534147,0.209613162627982,0.183843508450014,0,0.824140228955577,0.320919209591815,1.01078884705519,0,0.188626341386076,0.280924522409647,0.448176066834085,0.229741875822453,0.476293691283074,0.463537303779422,0.192909220463705,0.412085900803307,0.294397840268795,1.02860775715625,0.532427418478012,0.238436189947321,0.145346416632329,0.470546902076653,0.338458431566706,0.182927972872773,0.526139422875686,0.135804113845862,0.561142271657738,0.237270036248348,0.197008964751127,0.409231043169689,0.309873682371932,0.964533054905707,0.499621155875892,0.935726433781634,1.50409737833809,1.3390183244819,0,0.463735671240843|short_description=p@chr11:54723346..54723358,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=206 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:54723346..54723358,+ | |||
|id=chr11:54723346..54723358,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003103!1.70e-11!43;UBERON:0007100!2.65e-09!18;UBERON:0000948!2.65e-09!18;UBERON:0005498!2.65e-09!18;UBERON:0004140!2.65e-09!18;UBERON:0009881!2.65e-09!18;UBERON:0004141!2.65e-09!18;UBERON:0003084!2.65e-09!18;UBERON:0007005!2.65e-09!18;UBERON:0004139!2.65e-09!18;UBERON:0004291!2.65e-09!18;UBERON:0004872!2.42e-07!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001008,2.92e-10,19;UBERON:0003103,3.13e-10,43;UBERON:0007100,9.14e-10,18;UBERON:0000948,9.14e-10,18;UBERON:0005498,9.14e-10,18;UBERON:0004140,9.14e-10,18;UBERON:0009881,9.14e-10,18;UBERON:0004141,9.14e-10,18;UBERON:0003084,9.14e-10,18;UBERON:0007005,9.14e-10,18;UBERON:0004139,9.14e-10,18;UBERON:0004291,9.14e-10,18;UBERON:0006554,1.45e-09,18;UBERON:0004535,2.04e-08,23;UBERON:0001009,2.04e-08,23;UBERON:0004872,5.87e-08,33;UBERON:0002113,2.77e-07,14;UBERON:0003918,2.77e-07,14;UBERON:0011143,2.77e-07,14;UBERON:0005095,2.77e-07,14;UBERON:0007687,2.77e-07,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.7564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0.65407546914134,1.75748946187577,1.74986909166855,0.699932108126813,0,0,0,0,11.5766746216176,28.3668105539369,25.2679325215947,0,0,0,0.677689064138264,0.889294796111139,0,3.9554654502679,2.8419204597844,0.599200221036809,0.384218305321555,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0.510749352340751,0,0.395658863190582,0.0914876436024097,0,0,2.25105044012672,0.45839474333043,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,4.21333260395256,0,0,0.35333957451034,0,0,0,0,0.216491041011214,0.253359865475099,0,8.22123933977232,1.03575153458869,0.593768556259299,0,0,0,0.150722640552623,0.470354828542819,0.502666365318702,30.6521759990624,15.6167305473505,1.76922110389975,0.647067399789637,0.662524555381181,2.90925151881133,0,0,0,0.255457055208591,0,0,0,0.149790639404823,0,0,0,0,0,0,0.611036183101898,1.49288364732112,8.33985102831127,0.420883711772948,0.130120442962704,0.229902104433473,0.180062129805349,0,0.0680364991513279,0,0,0,0.431135985865684,0,0,0,0.556094498451196,0.348252166522167,0,0,0,0.257347907114715,0,3.72826390563903,1.87620847984877,2.70093092191522,1.18372367792605,1.96764231747404,1.3884040159864,1.39520366850245,1.07309360559848,1.5179494507732,0.987359099480883,0.656669856316381,0.486412857275134,0.584799949701329,1.53685080703735,0.671032093801859,0,0,0.330418782983798,0,0,0,0.128867461322093,0.80673409849337,1.55664630691409,11.223311940641,0,19.7638745668813,15.3314477368164,12.1363447945102,18.5215882763164,0,0.216138049874694,0.199141273254367,0.189667900953082,0,0,1.22190796707189,2.32742984601151,6.10181633045771,14.3546939272064,44.2830443938806,45.6866298018401,54.1713549616704,0,0.166845105716094,0,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0.324270453550071,0,1.43768206527355,0,0,0.252578877947112,0,0,4.80358294433172,0.189491411770485,0.325929952884052,0.339490171550376,0.469380496577004,0.670025029767263,1.42826184531608,1.95133647857799,0,0.44292937929755,0.797273843287435,2.78567635016755,1.89953480052485,3.18227928879325,3.01582567878545,0.54390568381871,0.983528546038072,1.10374698521893,0.160550589987792,0,0,0.504941854408746,0,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,2.6968616189571,0,0.488660878060728,0.989820737835213,0,0,0.302323556964751,0.188605079755898,0,0,0.775284879504663,0,0,0,1.05418608574999,0,2.04263763452273,0,0,0,0,0.713475270408282,0.164549020602121,1.522324745573,29.0992917999001,8.68511490541663,1.10264199027481,1.15420377059036,0,0.0603129249281559,0.119372344003136,0,3.49777003955821,0.370850604021019,0.341741761595705,0,0.370389054739423,0.188368457004691,0,0.228778173206523,0,0,0,4.77335309007557,0.158167996790568,0,0.108005340821801,0.418176592028937,1.09181281873089,0.134864346384821,0.330613822901344,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0.576060012515731,0.316011120628178,0,0.205421914329655,0,0.179026695667481,0,0.120195449519969,0.147689527174577,0,0,0,0.292373642219257,0,0.233753804363138,0.453460767230423,0,0.358855426437903,0,0.386379188064381,55.5540127335499,0.915758121336325,1.07184189539533,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.341467211508268,1.21553358534147,0.209613162627982,0.183843508450014,0,0.824140228955577,0.320919209591815,1.01078884705519,0,0.188626341386076,0.280924522409647,0.448176066834085,0.229741875822453,0.476293691283074,0.463537303779422,0.192909220463705,0.412085900803307,0.294397840268795,1.02860775715625,0.532427418478012,0.238436189947321,0.145346416632329,0.470546902076653,0.338458431566706,0.182927972872773,0.526139422875686,0.135804113845862,0.561142271657738,0.237270036248348,0.197008964751127,0.409231043169689,0.309873682371932,0.964533054905707,0.499621155875892,0.935726433781634,1.50409737833809,1.3390183244819,0,0.463735671240843 | |||
|short_description=p@chr11:54723346..54723358,+ | |||
}} |
Revision as of 20:01, 12 September 2013
Short description: | p@chr11:54723346..54723358, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:54723346..54723358, + |
Coexpression cluster: | MCL_coexpression_mm9:206 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
renal system | 2.92e-10 | 19 |
compound organ | 3.13e-10 | 43 |
primary circulatory organ | 9.14e-10 | 18 |
heart | 9.14e-10 | 18 |
primitive heart tube | 9.14e-10 | 18 |
primary heart field | 9.14e-10 | 18 |
anterior lateral plate mesoderm | 9.14e-10 | 18 |
heart tube | 9.14e-10 | 18 |
heart primordium | 9.14e-10 | 18 |
cardiac mesoderm | 9.14e-10 | 18 |
cardiogenic plate | 9.14e-10 | 18 |
heart rudiment | 9.14e-10 | 18 |
urinary system structure | 1.45e-09 | 18 |
cardiovascular system | 2.04e-08 | 23 |
circulatory system | 2.04e-08 | 23 |
splanchnic layer of lateral plate mesoderm | 5.87e-08 | 33 |
kidney | 2.77e-07 | 14 |
kidney mesenchyme | 2.77e-07 | 14 |
upper urinary tract | 2.77e-07 | 14 |
kidney rudiment | 2.77e-07 | 14 |
kidney field | 2.77e-07 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.