FFCP PHASE1:Mm9::chr11:55150152..55150159,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=245827|HGNC=|MCL_coexpression_id=30|UniProt=Q5F226|association_with_transcript=-86bp_to_ENSMUST00000068853_5end|description=CAGE_peak_3_at_Fat2_5end|id=chr11:55150152..55150159,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002614,1.59e-08,3;CL:0002610,1.88e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000014!5.21e-11!5;UBERON:0001003!5.21e-11!5;UBERON:0002097!5.21e-11!5;UBERON:0002199!5.21e-11!5;UBERON:0007029!5.21e-11!5;UBERON:0007376!5.21e-11!5;UBERON:0002416!5.21e-11!5;UBERON:0007383!5.21e-11!5|ontology_enrichment_uberon_v019_2=UBERON:0002037,6.55e-23,4;UBERON:0002680,6.55e-23,4;UBERON:0001895,6.55e-23,4;UBERON:0010092,6.55e-23,4;UBERON:0006215,6.55e-23,4;UBERON:0004733,1.13e-15,6;UBERON:0004732,1.13e-15,6;UBERON:0002028,1.13e-15,6;UBERON:0007277,1.13e-15,6;UBERON:0002038,1.59e-08,3;UBERON:0009663,1.59e-08,3;UBERON:0009661,1.59e-08,3;UBERON:0000125,1.59e-08,3;UBERON:0002308,1.59e-08,3;UBERON:0004684,1.88e-08,3;UBERON:0002275,1.88e-08,3;UBERON:0003076,2.25e-08,12;UBERON:0003057,2.25e-08,12;UBERON:0000073,2.91e-07,54|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0,1.11673199600552,0,0.61119299110724,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.9358333250623,37.281513812795,0,0,0,0,0,0.457500602818626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0,0,0,0.49465875882444,0.322928853391811,0.241251699712623,0.238744688006273,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0,0,0.147198920134397,0.342869252385415,0,0.238436189947321,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0,0,0,0.192906610981141,0.249810577937946,0,0,0,0,0|short_description=p3@Fat2}} | ||
|EntrezGene=245827 | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|UniProt=Q5F226 | |||
|association_with_transcript=-86bp_to_ENSMUST00000068853_5end | |||
|description=CAGE_peak_3_at_Fat2_5end | |||
|id=chr11:55150152..55150159,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,1.59e-08,3;CL:0002610,1.88e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000014!5.21e-11!5;UBERON:0001003!5.21e-11!5;UBERON:0002097!5.21e-11!5;UBERON:0002199!5.21e-11!5;UBERON:0007029!5.21e-11!5;UBERON:0007376!5.21e-11!5;UBERON:0002416!5.21e-11!5;UBERON:0007383!5.21e-11!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,6.55e-23,4;UBERON:0002680,6.55e-23,4;UBERON:0001895,6.55e-23,4;UBERON:0010092,6.55e-23,4;UBERON:0006215,6.55e-23,4;UBERON:0004733,1.13e-15,6;UBERON:0004732,1.13e-15,6;UBERON:0002028,1.13e-15,6;UBERON:0007277,1.13e-15,6;UBERON:0002038,1.59e-08,3;UBERON:0009663,1.59e-08,3;UBERON:0009661,1.59e-08,3;UBERON:0000125,1.59e-08,3;UBERON:0002308,1.59e-08,3;UBERON:0004684,1.88e-08,3;UBERON:0002275,1.88e-08,3;UBERON:0003076,2.25e-08,12;UBERON:0003057,2.25e-08,12;UBERON:0000073,2.91e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0,1.11673199600552,0,0.61119299110724,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.9358333250623,37.281513812795,0,0,0,0,0,0.457500602818626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0,0,0,0.49465875882444,0.322928853391811,0.241251699712623,0.238744688006273,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0,0,0.147198920134397,0.342869252385415,0,0.238436189947321,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0,0,0,0.192906610981141,0.249810577937946,0,0,0,0,0 | |||
|short_description=p3@Fat2 | |||
}} |
Revision as of 20:02, 12 September 2013
Short description: | p3@Fat2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Fat2_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | -86bp_to_ENSMUST00000068853_5end |
EntrezGene: | Fat2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 1.59e-08 | 3 |
raphe nuclei neuron | 1.88e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 6.55e-23 | 4 |
regional part of metencephalon | 6.55e-23 | 4 |
metencephalon | 6.55e-23 | 4 |
future metencephalon | 6.55e-23 | 4 |
rhombic lip | 6.55e-23 | 4 |
segmental subdivision of hindbrain | 1.13e-15 | 6 |
segmental subdivision of nervous system | 1.13e-15 | 6 |
hindbrain | 1.13e-15 | 6 |
presumptive hindbrain | 1.13e-15 | 6 |
substantia nigra | 1.59e-08 | 3 |
telencephalic nucleus | 1.59e-08 | 3 |
midbrain nucleus | 1.59e-08 | 3 |
neural nucleus | 1.59e-08 | 3 |
nucleus of brain | 1.59e-08 | 3 |
raphe nuclei | 1.88e-08 | 3 |
reticular formation | 1.88e-08 | 3 |
posterior neural tube | 2.25e-08 | 12 |
chordal neural plate | 2.25e-08 | 12 |
regional part of nervous system | 2.91e-07 | 54 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.