FFCP PHASE1:Mm9::chr12:116184624..116184649,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=192|UniProt=|association_with_transcript=-170bp_to_ENSMUST00000103517_5end|description=CAGE_peak_1_at_ENSMUST00000103517_5end|id=chr12:116184624..116184649,-|ontology_enrichment_celltype=CL:0000553!5.34e-09!6;CL:0000556!5.34e-09!6|ontology_enrichment_celltype_v019_2=CL:0000553,2.30e-16,6;CL:0000556,2.30e-16,6;CL:0000050,7.27e-11,9;CL:0000839,1.83e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!5.47e-16!51;UBERON:0004923!2.67e-08!24;UBERON:0002465!5.81e-08!3|ontology_enrichment_uberon_v019_2=UBERON:0002465,5.71e-14,3;UBERON:0002193,3.06e-10,48;UBERON:0002405,3.06e-10,48;UBERON:0001962,8.48e-10,2;UBERON:0001961,8.48e-10,2;UBERON:0001744,8.48e-10,2;UBERON:0001155,2.44e-09,2;UBERON:0000059,2.44e-09,2;UBERON:0007023,3.43e-08,51|phase1_expression=0,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21485160433896,1.39912375625629,1.73504190947031,3.15363197293199,3.39511721438424,1.02051948181284,0,0,14.2393256286132,44.505400527031,0,0,0,0.380046838912748,0.504060259519861,2.66076612786366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51004345451963,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,6.46044332606059,0,0,0,0,0,0,0,0,0,0,3.31133251185274,61.6272163080269,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0.884610551949874,0,0,0.484875253135222,1.86391761218122,0,0,32.9539601219083,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,9.78467096655114,0,0,0,0,0,0,0.949058123089023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0,0,0,0.159454768657487,0.327726629431476,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.7396402054776,0,0,1.31857919903284,2.05041341581538,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0,27.9602690889117,0,0,0,0,0,0,0,0,0,0,0,1.89606672376907,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0,0.375364950902364,0.549454872801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@ENSMUST00000103517}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=192 | |||
|UniProt= | |||
|association_with_transcript=-170bp_to_ENSMUST00000103517_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000103517_5end | |||
|id=chr12:116184624..116184649,- | |||
|ontology_enrichment_celltype=CL:0000553!5.34e-09!6;CL:0000556!5.34e-09!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,2.30e-16,6;CL:0000556,2.30e-16,6;CL:0000050,7.27e-11,9;CL:0000839,1.83e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.47e-16!51;UBERON:0004923!2.67e-08!24;UBERON:0002465!5.81e-08!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,5.71e-14,3;UBERON:0002193,3.06e-10,48;UBERON:0002405,3.06e-10,48;UBERON:0001962,8.48e-10,2;UBERON:0001961,8.48e-10,2;UBERON:0001744,8.48e-10,2;UBERON:0001155,2.44e-09,2;UBERON:0000059,2.44e-09,2;UBERON:0007023,3.43e-08,51 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21485160433896,1.39912375625629,1.73504190947031,3.15363197293199,3.39511721438424,1.02051948181284,0,0,14.2393256286132,44.505400527031,0,0,0,0.380046838912748,0.504060259519861,2.66076612786366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51004345451963,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,6.46044332606059,0,0,0,0,0,0,0,0,0,0,3.31133251185274,61.6272163080269,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0.884610551949874,0,0,0.484875253135222,1.86391761218122,0,0,32.9539601219083,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,9.78467096655114,0,0,0,0,0,0,0.949058123089023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0,0,0,0.159454768657487,0.327726629431476,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.7396402054776,0,0,1.31857919903284,2.05041341581538,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0,27.9602690889117,0,0,0,0,0,0,0,0,0,0,0,1.89606672376907,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0,0.375364950902364,0.549454872801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENSMUST00000103517 | |||
}} |
Revision as of 22:29, 12 September 2013
Short description: | p1@ENSMUST00000103517 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000103517_5end |
Coexpression cluster: | MCL_coexpression_mm9:192 |
Association with transcript: | -170bp_to_ENSMUST00000103517_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 2.30e-16 | 6 |
megakaryocyte | 2.30e-16 | 6 |
megakaryocyte-erythroid progenitor cell | 7.27e-11 | 9 |
myeloid lineage restricted progenitor cell | 1.83e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 5.71e-14 | 3 |
hemolymphoid system | 3.06e-10 | 48 |
immune system | 3.06e-10 | 48 |
gut-associated lymphoid tissue | 8.48e-10 | 2 |
mucosa-associated lymphoid tissue | 8.48e-10 | 2 |
lymphoid tissue | 8.48e-10 | 2 |
colon | 2.44e-09 | 2 |
large intestine | 2.44e-09 | 2 |
adult organism | 3.43e-08 | 51 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.