FFCP PHASE1:Hg19::chr3:169078072..169078076,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:169078072..169078076,-|id=chr3:169078072..169078076,-|ontology_enrichment_celltype=CL:0002618!4.58e-07!3|ontology_enrichment_celltype_v019=CL:0002618;4.83e-30;3!CL:0000313;3.67e-23;1!CL:0002138;1.01e-15;6!CL:0002543;1.41e-15;6!CL:0002139;4.50e-15;24!CL:0000047;2.74e-12;2!CL:0000159;2.74e-12;2!CL:0000115;6.89e-08;36|ontology_enrichment_celltype_v019_2=CL:0002618,4.17e-30,3;CL:0000313,6.40e-23,1;CL:0005020,9.74e-16,6;CL:0002138,9.74e-16,6;CL:0005022,9.74e-16,6;CL:0002543,1.31e-15,6;CL:0002139,4.26e-15,24;CL:0000159,3.62e-12,2;CL:0000115,3.33e-10,36;CL:0002078,3.11e-08,45|ontology_enrichment_development_v019=UBERON:0005754;1.33e-23;1!CL:0005022;1.01e-15;6!UBERON:0007297;1.65e-12;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2152;3.67e-23;1|ontology_enrichment_disease_v019_2=DOID:2152,6.40e-23,1|ontology_enrichment_uberon=UBERON:0007023!8.22e-11!115;UBERON:0004175!8.76e-07!25|ontology_enrichment_uberon_v019=UBERON:0000998;1.33e-23;1!UBERON:0002171;1.33e-23;1!UBERON:0006868;1.33e-23;1!UBERON:0006518;1.33e-23;1!UBERON:0008949;1.33e-23;1!UBERON:0000101;1.33e-23;1!UBERON:0002167;1.33e-23;1!UBERON:0004911;3.67e-23;1!UBERON:0002066;1.77e-18;5!UBERON:0004909;2.74e-12;2!UBERON:0001473;4.80e-12;8!UBERON:0004536;4.80e-12;8!UBERON:0006558;4.80e-12;8!UBERON:0001638;1.02e-10;9!UBERON:0010260;1.02e-10;9!UBERON:0003920;1.02e-10;9!UBERON:0004582;1.02e-10;9!UBERON:0002465;7.91e-10;10!UBERON:0006947;8.96e-09;3!UBERON:0004054;8.96e-09;3!UBERON:0005904;6.87e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0000998,1.07e-23,1;UBERON:0006868,1.07e-23,1;UBERON:0002171,1.67e-23,1;UBERON:0006518,1.67e-23,1;UBERON:0008949,1.67e-23,1;UBERON:0000101,1.67e-23,1;UBERON:0002167,1.67e-23,1;UBERON:0004911,6.40e-23,1;UBERON:0002066,1.62e-18,5;UBERON:0004909,3.62e-12,2;UBERON:0001473,4.67e-12,8;UBERON:0004536,4.67e-12,8;UBERON:0006558,4.67e-12,8;UBERON:0001638,9.69e-11,9;UBERON:0010260,9.69e-11,9;UBERON:0003920,9.69e-11,9;UBERON:0004582,9.69e-11,9;UBERON:0002465,7.74e-10,10;UBERON:0006947,8.31e-09,3;UBERON:0004054,8.31e-09,3;UBERON:0005904,6.50e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567208902984407,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29208379584664,2.13459757612026,0,0,0,0,0,0.81014194788176,1.51809538082936,1.12264686313085,0.337834441449967,0,0,0.366403487860815,0,0,0,0,0,0.662045904066094,0,0,0,0,0,0.311211035399766,0.134710672069688,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765676274967505,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0.597743964753209,0,0,0,0,0,0.0898683511473268,0.179021174675609,0,0.197286811273867,0,0,0,0,0,0,0.0874599999961957,0.724999575434793,0.341380344856499,0,0,0,0.291604613383254,0,0,0,0,0,0.295547618953547,0,0,0.278847488557207,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0.123563938946503,0,0.134802265961354,0,0.234264445725339,0,0,0,0.394584402849391,1.20990716048664,0,0,0.150323419414493,0.207376382794494,0,0,0,0,0.569219092059585,0,0.694238953340524,0.0979923974143777,0.261177619741208,0.17472666824203,0,0.19351266257817,0.146178634172371,0.0821154570532092,0,0,0,0,0.397429223405979,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0.429765441419957,0,0.279282401272254,0.458320848023367,0.717873024576814,0.199679000498991,0,0.223171457441873,0.335917362433631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0.335434687599266,0.551639951094387,0.262272940674991,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52893040697076,0,0,0.213574825135389,0.471612915298998,2.07119527673598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:169078072..169078076,- | |||
|id=chr3:169078072..169078076,- | |||
|ontology_enrichment_celltype=CL:0002618!4.58e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002618;4.83e-30;3!CL:0000313;3.67e-23;1!CL:0002138;1.01e-15;6!CL:0002543;1.41e-15;6!CL:0002139;4.50e-15;24!CL:0000047;2.74e-12;2!CL:0000159;2.74e-12;2!CL:0000115;6.89e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002618,4.17e-30,3;CL:0000313,6.40e-23,1;CL:0005020,9.74e-16,6;CL:0002138,9.74e-16,6;CL:0005022,9.74e-16,6;CL:0002543,1.31e-15,6;CL:0002139,4.26e-15,24;CL:0000159,3.62e-12,2;CL:0000115,3.33e-10,36;CL:0002078,3.11e-08,45 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.33e-23;1!CL:0005022;1.01e-15;6!UBERON:0007297;1.65e-12;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;3.67e-23;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,6.40e-23,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.22e-11!115;UBERON:0004175!8.76e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;1.33e-23;1!UBERON:0002171;1.33e-23;1!UBERON:0006868;1.33e-23;1!UBERON:0006518;1.33e-23;1!UBERON:0008949;1.33e-23;1!UBERON:0000101;1.33e-23;1!UBERON:0002167;1.33e-23;1!UBERON:0004911;3.67e-23;1!UBERON:0002066;1.77e-18;5!UBERON:0004909;2.74e-12;2!UBERON:0001473;4.80e-12;8!UBERON:0004536;4.80e-12;8!UBERON:0006558;4.80e-12;8!UBERON:0001638;1.02e-10;9!UBERON:0010260;1.02e-10;9!UBERON:0003920;1.02e-10;9!UBERON:0004582;1.02e-10;9!UBERON:0002465;7.91e-10;10!UBERON:0006947;8.96e-09;3!UBERON:0004054;8.96e-09;3!UBERON:0005904;6.87e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,1.07e-23,1;UBERON:0006868,1.07e-23,1;UBERON:0002171,1.67e-23,1;UBERON:0006518,1.67e-23,1;UBERON:0008949,1.67e-23,1;UBERON:0000101,1.67e-23,1;UBERON:0002167,1.67e-23,1;UBERON:0004911,6.40e-23,1;UBERON:0002066,1.62e-18,5;UBERON:0004909,3.62e-12,2;UBERON:0001473,4.67e-12,8;UBERON:0004536,4.67e-12,8;UBERON:0006558,4.67e-12,8;UBERON:0001638,9.69e-11,9;UBERON:0010260,9.69e-11,9;UBERON:0003920,9.69e-11,9;UBERON:0004582,9.69e-11,9;UBERON:0002465,7.74e-10,10;UBERON:0006947,8.31e-09,3;UBERON:0004054,8.31e-09,3;UBERON:0005904,6.50e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567208902984407,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29208379584664,2.13459757612026,0,0,0,0,0,0.81014194788176,1.51809538082936,1.12264686313085,0.337834441449967,0,0,0.366403487860815,0,0,0,0,0,0.662045904066094,0,0,0,0,0,0.311211035399766,0.134710672069688,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765676274967505,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0.597743964753209,0,0,0,0,0,0.0898683511473268,0.179021174675609,0,0.197286811273867,0,0,0,0,0,0,0.0874599999961957,0.724999575434793,0.341380344856499,0,0,0,0.291604613383254,0,0,0,0,0,0.295547618953547,0,0,0.278847488557207,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0.123563938946503,0,0.134802265961354,0,0.234264445725339,0,0,0,0.394584402849391,1.20990716048664,0,0,0.150323419414493,0.207376382794494,0,0,0,0,0.569219092059585,0,0.694238953340524,0.0979923974143777,0.261177619741208,0.17472666824203,0,0.19351266257817,0.146178634172371,0.0821154570532092,0,0,0,0,0.397429223405979,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0.429765441419957,0,0.279282401272254,0.458320848023367,0.717873024576814,0.199679000498991,0,0.223171457441873,0.335917362433631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0.335434687599266,0.551639951094387,0.262272940674991,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52893040697076,0,0,0.213574825135389,0.471612915298998,2.07119527673598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0,0,0,0,0,0,0,0.607719912354764,0,0,0,0,0.327609848846413,0.245772908753719,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0.227662191351298,0.177404740325278,0,0,0,0,0,0.111231401892069,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0.3414369541879,0,0,0.118332000730565,0.0852134047591577,2.54032230114557,0,0,0,1.00669888618013,0,0.731507549893617,0.647428837187895,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0.490296643507811,0,0,0,0,0,0.281951753939561,0,0,0.178553938605658,0,0.240724100067505,0.730336388246517,0,0,0.315543124386369,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0.404234377916439,0,0,0.134704106029175,0.0717222053926763,0.665320713092027,0.162806537221949,0,0,0.0898252021065869,0,0.244482888365733,0,0.665756774185513,0,0 | |||
|short_description=p@chr3:169078072..169078076,- | |||
}} |
Revision as of 22:37, 12 September 2013
Short description: | p@chr3:169078072..169078076, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:169078072..169078076, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of umbilical vein | 4.17e-30 | 3 |
serous secreting cell | 6.40e-23 | 1 |
lymphangioblast | 9.74e-16 | 6 |
endothelial cell of lymphatic vessel | 9.74e-16 | 6 |
vascular lymphangioblast | 9.74e-16 | 6 |
vein endothelial cell | 1.31e-15 | 6 |
endothelial cell of vascular tree | 4.26e-15 | 24 |
seromucus secreting cell | 3.62e-12 | 2 |
endothelial cell | 3.33e-10 | 36 |
meso-epithelial cell | 3.11e-08 | 45 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 1.07e-23 | 1 |
seminal fluid secreting gland | 1.07e-23 | 1 |
lower lobe of right lung | 1.67e-23 | 1 |
right lung lobe | 1.67e-23 | 1 |
lower lobe of lung | 1.67e-23 | 1 |
lobe of lung | 1.67e-23 | 1 |
right lung | 1.67e-23 | 1 |
epithelium of female gonad | 6.40e-23 | 1 |
umbilical vein | 1.62e-18 | 5 |
epithelium of gonad | 3.62e-12 | 2 |
lymphatic vessel | 4.67e-12 | 8 |
lymph vasculature | 4.67e-12 | 8 |
lymphatic part of lymphoid system | 4.67e-12 | 8 |
vein | 9.69e-11 | 9 |
umbilical blood vessel | 9.69e-11 | 9 |
venous blood vessel | 9.69e-11 | 9 |
venous system | 9.69e-11 | 9 |
lymphoid system | 7.74e-10 | 10 |
male genital duct | 8.31e-09 | 3 |
internal male genitalia | 8.31e-09 | 3 |
duct of male reproductive system | 6.50e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 6.40e-23 | 1 |
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