FFCP PHASE1:Hg19::chr3:45635587..45635658,+: Difference between revisions
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{{FFCP | 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4.5671745016792,9.1064876540519,17.8291764026904,11.7538667306895,28.295521557174,12.914249265598,7.62964173329049,13.3559040198884,37.2625196338432,21.8210798124429,6.59885477647208,12.8925195124343,18.2631744101899,21.1609039394249,9.555033757741,40.5272005481641,1.42212250559454,12.089108238285,27.1218904792024,11.2239591062235,15.5412123122278,16.3889738010192,19.3552705307946,25.3834141703964,14.5548360898595,15.2531994518892,13.5483856061097,10.9971296901144,10.2368107269226,13.3775451456841,10.7381214525881,22.8690044323516,26.8219434960993,20.7177227900126,25.357713293493,26.6757319207786,14.5713297917742,5.38060765962843,13.9265542612958,13.9136506209755,9.14863264515576,3.84791808609002,9.81258483183378,12.502213613487,15.299169235277,4.70317296361523,20.3473107055742,14.6119459203008,19.6308467114945,13.664134415046,14.792950465419,15.1235132072157,23.9658990848627,39.8994326556443,31.9811698959773,6.96360360562065,9.17526666460799,7.54268846878182,17.5280733179164,39.909447656195,18.4908062265372,15.6193846571253,6.66316603870964,10.4724165681691,20.6320467801006,11.903840581336,20.3357276597824,18.6029421713229,23.4669550193247,13.0026030636798,20.7785541658757,17.3381010561369,11.2231310211535,19.1141391032477,21.0594333005595,9.85123076837112,9.11078042531007,18.2417276680931,13.5497224579083,26.6542477376226,17.6167679283168,28.4191203278427,42.1487310068875,13.1194279219318,28.3229854337834,33.147218989148,19.3767905628296,21.5606979683727,38.7274304833878,24.4572720389026,20.6249421058528,12.9431197091449,13.0207361970813,7.7228912914776,18.2345160276371,14.0784565442073,26.7708762760478,15.8689509543138,32.6220819350901,24.9579504052873,41.0327670148138|short_description=p1@LIMD1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=8994 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6612 | |||
|TSSclassifier=W | |||
|UniProt=C9JRJ5 | |||
|association_with_transcript=-157bp_to_ENST00000440097_5end | |||
|description=CAGE_peak_1_at_LIMD1_5end | |||
|id=chr3:45635587..45635658,+ | |||
|ontology_enrichment_celltype=CL:0000557!3.84e-10!71;CL:0002087!3.07e-09!119;CL:0002009!3.97e-09!65;CL:0002194!4.14e-09!63;CL:0000576!4.14e-09!63;CL:0000040!4.14e-09!63;CL:0000559!4.14e-09!63;CL:0000839!1.45e-08!70;CL:0002031!3.21e-08!124;CL:0000738!1.47e-07!140;CL:0000988!2.20e-07!182;CL:0000860!3.97e-07!45;CL:0000037!5.72e-07!172;CL:0000566!5.72e-07!172 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,2.30e-09,67;CL:0002087,1.52e-08,115;CL:0002009,2.31e-08,61;CL:0002194,2.42e-08,59;CL:0000576,2.42e-08,59;CL:0000040,2.42e-08,59;CL:0000559,2.42e-08,59;CL:0000473,2.59e-08,48;CL:0000234,2.59e-08,48;CL:0000839,8.00e-08,66;CL:0002031,1.45e-07,120;CL:0000738,6.04e-07,136;CL:0000988,7.67e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.05e-15!115;UBERON:0001474!7.38e-14!86;UBERON:0002371!6.45e-13!80;UBERON:0002193!1.54e-12!112;UBERON:0004765!1.82e-12!101;UBERON:0001434!1.82e-12!101;UBERON:0002390!6.67e-12!102;UBERON:0003061!6.67e-12!102;UBERON:0002384!8.92e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,5.13e-14,93;UBERON:0001474,4.93e-13,82;UBERON:0001434,3.78e-12,100;UBERON:0004765,3.81e-12,90;UBERON:0002371,4.21e-12,76;UBERON:0002193,9.39e-12,108;UBERON:0002390,4.02e-11,98;UBERON:0003061,4.02e-11,98 | |||
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| |||
|short_description=p1@LIMD1 | |||
}} |
Revision as of 00:15, 13 September 2013
Short description: | p1@LIMD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LIMD1_5end |
Coexpression cluster: | NA |
Association with transcript: | -157bp_to_ENST00000440097_5end |
EntrezGene: | LIMD1 |
HGNC: | 6612 |
UniProt: | C9JRJ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 2.30e-09 | 67 |
nongranular leukocyte | 1.52e-08 | 115 |
macrophage dendritic cell progenitor | 2.31e-08 | 61 |
monopoietic cell | 2.42e-08 | 59 |
monocyte | 2.42e-08 | 59 |
monoblast | 2.42e-08 | 59 |
promonocyte | 2.42e-08 | 59 |
defensive cell | 2.59e-08 | 48 |
phagocyte | 2.59e-08 | 48 |
myeloid lineage restricted progenitor cell | 8.00e-08 | 66 |
hematopoietic lineage restricted progenitor cell | 1.45e-07 | 120 |
leukocyte | 6.04e-07 | 136 |
hematopoietic cell | 7.67e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
immune system | 5.13e-14 | 93 |
bone element | 4.93e-13 | 82 |
skeletal system | 3.78e-12 | 100 |
skeletal element | 3.81e-12 | 90 |
bone marrow | 4.21e-12 | 76 |
hemolymphoid system | 9.39e-12 | 108 |
hematopoietic system | 4.02e-11 | 98 |
blood island | 4.02e-11 | 98 |
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