FFCP PHASE1:Mm9::chr13:46822423..46822426,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:46822423..46822426,-|id=chr13:46822423..46822426,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000213,9.51e-16,1;CL:0002078,9.51e-16,1;CL:0000115,9.51e-16,1;CL:0002262,9.51e-16,1;CL:1000398,9.51e-16,1;CL:0000625,1.86e-15,1;CL:0000791,2.03e-07,9;CL:0000789,2.03e-07,9;CL:0002420,2.03e-07,9;CL:0002419,2.03e-07,9;CL:0000790,2.03e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002394,9.51e-16,1;UBERON:0001281,9.51e-16,1;UBERON:0000353,9.51e-16,1;UBERON:0003497,9.51e-16,1;UBERON:0003909,9.51e-16,1;UBERON:0003928,9.51e-16,1;UBERON:0003835,9.51e-16,1;UBERON:0003513,9.51e-16,1;UBERON:0001280,9.51e-16,1;UBERON:0004647,9.51e-16,1;UBERON:0002294,9.51e-16,1;UBERON:0001173,9.51e-16,1;UBERON:0004912,9.51e-16,1;UBERON:0005171,9.51e-16,1|phase1_expression=0.320297694209588,0,0,0.30246421130683,0,0,0,0.774739940649458,1.97104211012333,0,0.34243593645101,0.0797721589953364,0.171200729931206,0.34968160967599,0,0,0,0.473193248037357,0.411343300817216,0,0.425216450755349,0.297872853602656,0,0,0,0,0,0,0.190023419456374,0,0,0.635030673459631,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,1.36609096991689,0,0,0,0,0,0.218025156380447,0,0,0,0,0.503347818173209,0,1.00828139742739,0,0,0,0.202316460859598,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,0,0.0755715601067855,1.15945795480671,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.346970653532272,0,0,0,0.23517741427141,0.125666591329675,0.247194967734374,0,0,0.161766849947409,0.441683036920787,0,0,0,0,0.255457055208591,0.11981512450592,0,0.127070227073065,0.149790639404823,0,0,0,0,0,0.162241263067758,0.407357455401265,0.124406970610093,0.505445516867349,0.210441855886474,0,0,0,0.150704817835715,0.340182495756639,0.2562274405697,0.187403449119458,0,0,0,0,0,0.278047249225598,0,0.205782136407943,0.398068533636986,2.1066395619397,0,0,0.207125772535502,0,0.180062061461015,0.473489471170421,0,0.462801338662135,0,0,0,0,0.164167464079095,0.162137619091711,0.146199987425332,0,0.268412837520744,0.210289948564127,0.102904612379284,0,0,0,0.464473343720877,0,0.201683524623343,0.22237804384487,0,0.949058123089023,0,0,0,0.19496408711912,0,0,0.398282546508734,0,0.228497025219458,0,0.407302655690628,0.193952487167626,0.140271639780637,0.316182685621286,0.147610147979602,0.941992367048249,0.123397163921801,0,0,0.196558995113203,0.674586337154561,0,0.72353147925725,0,0.575392274901621,0.486405680325106,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0.195133647857799,0.315270288212382,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0.275936746304732,0,0.117211686592203,0,0,0.315508219416257,0,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0,0,0.162886959353576,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0,0.727067458955011,0,0.316036757935816,0,0,0,0.540183282093931,0.129358683782755,0.214337035031592,0,0.178368817602071,0.164549020602121,0,0.469343416127421,0.21183207086382,0,0.32977250588296,0.161464426695906,0.241251699712623,0,0.164140899745061,0,0,0,0,0.185194527369712,1.13021074202815,0.27338845544205,0.457556346413045,0.169978429993855,0.559805809294632,0.276399947608848,0,0.158167996790568,0.609958401380546,0.216010681643603,0.627264888043406,0.218362563746178,0.269728692769641,0.247960367176008,0,0.259229946583586,0,0,0.747582730219894,0.165458490457098,0,0.516639293910924,0.675824501963113,0.352071715937262,0.651021924219751,0.209718688851422,0.483168241652012,0.576060012515731,0.316011120628178,0.405450430580328,0.102710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0.360586348559907,0.590758108698309,0.100966449948148,0.228620419965,0.403304740547362,0.194915761479505,0.384847366561318,0.350630706544707,0,0,0.0897138566094757,0.167884616364078,0,0,0,0,0.501572104035363,0,0.460325236507177,0,0,0,0,0,0.900642406448441,0,0.51776031175182,0.103787347584177,0,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0,0.192075457214608,0.17230640686684,0.476293691283074,0.115884325944855,0,0.412085900803307,0.147198920134397,0,0.354951612318675,0.476872379894642,0,0,0.338458431566706,0,0,0.271608227691724,0,0.237270036248348,0,0,0,0,0.249810577937946,0.467863216890817,0,0.191288332068843,0,0.231867835620421|short_description=p@chr13:46822423..46822426,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:46822423..46822426,- | |||
|id=chr13:46822423..46822426,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,9.51e-16,1;CL:0002078,9.51e-16,1;CL:0000115,9.51e-16,1;CL:0002262,9.51e-16,1;CL:1000398,9.51e-16,1;CL:0000625,1.86e-15,1;CL:0000791,2.03e-07,9;CL:0000789,2.03e-07,9;CL:0002420,2.03e-07,9;CL:0002419,2.03e-07,9;CL:0000790,2.03e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,9.51e-16,1;UBERON:0001281,9.51e-16,1;UBERON:0000353,9.51e-16,1;UBERON:0003497,9.51e-16,1;UBERON:0003909,9.51e-16,1;UBERON:0003928,9.51e-16,1;UBERON:0003835,9.51e-16,1;UBERON:0003513,9.51e-16,1;UBERON:0001280,9.51e-16,1;UBERON:0004647,9.51e-16,1;UBERON:0002294,9.51e-16,1;UBERON:0001173,9.51e-16,1;UBERON:0004912,9.51e-16,1;UBERON:0005171,9.51e-16,1 | |||
|phase1_expression=0.320297694209588,0,0,0.30246421130683,0,0,0,0.774739940649458,1.97104211012333,0,0.34243593645101,0.0797721589953364,0.171200729931206,0.34968160967599,0,0,0,0.473193248037357,0.411343300817216,0,0.425216450755349,0.297872853602656,0,0,0,0,0,0,0.190023419456374,0,0,0.635030673459631,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,1.36609096991689,0,0,0,0,0,0.218025156380447,0,0,0,0,0.503347818173209,0,1.00828139742739,0,0,0,0.202316460859598,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,0,0.0755715601067855,1.15945795480671,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.346970653532272,0,0,0,0.23517741427141,0.125666591329675,0.247194967734374,0,0,0.161766849947409,0.441683036920787,0,0,0,0,0.255457055208591,0.11981512450592,0,0.127070227073065,0.149790639404823,0,0,0,0,0,0.162241263067758,0.407357455401265,0.124406970610093,0.505445516867349,0.210441855886474,0,0,0,0.150704817835715,0.340182495756639,0.2562274405697,0.187403449119458,0,0,0,0,0,0.278047249225598,0,0.205782136407943,0.398068533636986,2.1066395619397,0,0,0.207125772535502,0,0.180062061461015,0.473489471170421,0,0.462801338662135,0,0,0,0,0.164167464079095,0.162137619091711,0.146199987425332,0,0.268412837520744,0.210289948564127,0.102904612379284,0,0,0,0.464473343720877,0,0.201683524623343,0.22237804384487,0,0.949058123089023,0,0,0,0.19496408711912,0,0,0.398282546508734,0,0.228497025219458,0,0.407302655690628,0.193952487167626,0.140271639780637,0.316182685621286,0.147610147979602,0.941992367048249,0.123397163921801,0,0,0.196558995113203,0.674586337154561,0,0.72353147925725,0,0.575392274901621,0.486405680325106,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0.195133647857799,0.315270288212382,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0.275936746304732,0,0.117211686592203,0,0,0.315508219416257,0,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0,0,0.162886959353576,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0,0.727067458955011,0,0.316036757935816,0,0,0,0.540183282093931,0.129358683782755,0.214337035031592,0,0.178368817602071,0.164549020602121,0,0.469343416127421,0.21183207086382,0,0.32977250588296,0.161464426695906,0.241251699712623,0,0.164140899745061,0,0,0,0,0.185194527369712,1.13021074202815,0.27338845544205,0.457556346413045,0.169978429993855,0.559805809294632,0.276399947608848,0,0.158167996790568,0.609958401380546,0.216010681643603,0.627264888043406,0.218362563746178,0.269728692769641,0.247960367176008,0,0.259229946583586,0,0,0.747582730219894,0.165458490457098,0,0.516639293910924,0.675824501963113,0.352071715937262,0.651021924219751,0.209718688851422,0.483168241652012,0.576060012515731,0.316011120628178,0.405450430580328,0.102710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0.360586348559907,0.590758108698309,0.100966449948148,0.228620419965,0.403304740547362,0.194915761479505,0.384847366561318,0.350630706544707,0,0,0.0897138566094757,0.167884616364078,0,0,0,0,0.501572104035363,0,0.460325236507177,0,0,0,0,0,0.900642406448441,0,0.51776031175182,0.103787347584177,0,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0,0.192075457214608,0.17230640686684,0.476293691283074,0.115884325944855,0,0.412085900803307,0.147198920134397,0,0.354951612318675,0.476872379894642,0,0,0.338458431566706,0,0,0.271608227691724,0,0.237270036248348,0,0,0,0,0.249810577937946,0.467863216890817,0,0.191288332068843,0,0.231867835620421 | |||
|short_description=p@chr13:46822423..46822426,- | |||
}} |
Revision as of 00:38, 13 September 2013
Short description: | p@chr13:46822423..46822426, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:46822423..46822426, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 9.51e-16 | 1 |
meso-epithelial cell | 9.51e-16 | 1 |
endothelial cell | 9.51e-16 | 1 |
endothelial cell of sinusoid | 9.51e-16 | 1 |
endothelial cell of hepatic sinusoid | 9.51e-16 | 1 |
CD8-positive, alpha-beta T cell | 1.86e-15 | 1 |
mature alpha-beta T cell | 2.03e-07 | 9 |
alpha-beta T cell | 2.03e-07 | 9 |
immature T cell | 2.03e-07 | 9 |
mature T cell | 2.03e-07 | 9 |
immature alpha-beta T cell | 2.03e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bile duct | 9.51e-16 | 1 |
hepatic sinusoid | 9.51e-16 | 1 |
parenchyma | 9.51e-16 | 1 |
abdomen blood vessel | 9.51e-16 | 1 |
sinusoid | 9.51e-16 | 1 |
digestive system duct | 9.51e-16 | 1 |
abdominal segment blood vessel | 9.51e-16 | 1 |
trunk blood vessel | 9.51e-16 | 1 |
liver parenchyma | 9.51e-16 | 1 |
liver lobule | 9.51e-16 | 1 |
biliary system | 9.51e-16 | 1 |
biliary tree | 9.51e-16 | 1 |
biliary bud | 9.51e-16 | 1 |
hepatic duct | 9.51e-16 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.