FFCP PHASE1:Hg19::chr3:587825..587862,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C153|description=CAGE_peak_at_chr3:587825..587862,+|id=chr3:587825..587862,+|ontology_enrichment_celltype=CL:0002150!9.98e-20!3;CL:0000861!9.98e-20!3|ontology_enrichment_celltype_v019=CL:0002097;1.93e-08;2|ontology_enrichment_celltype_v019_2=CL:0002097,1.86e-08,2|ontology_enrichment_development_v019=UBERON:0006215;1.00e-42;3|ontology_enrichment_disease=DOID:6193!2.31e-07!1|ontology_enrichment_disease_v019=DOID:154;2.77e-08;2!DOID:4236;2.77e-08;2|ontology_enrichment_disease_v019_2=DOID:154,2.87e-08,2;DOID:4236,2.87e-08,2|ontology_enrichment_uberon=UBERON:0002680!1.64e-17!9;UBERON:0001895!1.64e-17!9;UBERON:0010092!1.64e-17!9;UBERON:0003076!1.10e-14!15;UBERON:0003057!1.10e-14!15;UBERON:0000341!8.65e-14!2;UBERON:0004733!4.35e-13!12;UBERON:0002028!4.35e-13!12;UBERON:0007277!4.35e-13!12;UBERON:0004732!4.57e-12!13;UBERON:0002037!2.32e-10!6;UBERON:0006215!2.32e-10!6;UBERON:0000988!4.18e-09!3;UBERON:0007029!5.96e-08!1;UBERON:0002426!1.22e-07!1;UBERON:0003831!1.22e-07!1;UBERON:0003898!1.22e-07!1;UBERON:0004830!1.22e-07!1;UBERON:0001774!1.22e-07!1;UBERON:0003830!1.22e-07!1;UBERON:0005175!1.22e-07!1;UBERON:0003897!1.22e-07!1;UBERON:0001103!1.22e-07!1;UBERON:0010084!1.22e-07!1;UBERON:0001882!3.17e-07!1;UBERON:0005403!3.17e-07!1|ontology_enrichment_uberon_v019=UBERON:0002037;9.23e-22;6!UBERON:0007029;1.07e-15;1!UBERON:0002680;9.75e-15;9!UBERON:0001895;9.75e-15;9!UBERON:0004733;3.30e-11;12!UBERON:0002028;3.30e-11;12!UBERON:0004732;2.17e-10;13!UBERON:0000341;1.44e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0002037,8.29e-22,6;UBERON:0006215,8.29e-22,6;UBERON:0007029,1.16e-15,1;UBERON:0002680,9.09e-15,9;UBERON:0001895,9.09e-15,9;UBERON:0010092,9.09e-15,9;UBERON:0004733,3.13e-11,12;UBERON:0002028,3.13e-11,12;UBERON:0007277,3.13e-11,12;UBERON:0004732,2.06e-10,13;UBERON:0003076,4.24e-09,15;UBERON:0003057,4.24e-09,15;UBERON:0000341,1.39e-08,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0.137836572484531,0,0,0,2.1367688555217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1482867571099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0.874813840149763,1.38899995946634,0,0,1.52581736317083,7.96170671504817,2.95547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,1.35458863804719,1.5348756588099,0.739039113478883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.936669811613763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64550705337374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0,0,0,0,0,0,0,0,0,0,0,0,35.4670875497262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,13.9177731760584,7.28566489588709,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,10.2367705529408,0,0,0,0,0.404234377916439,0,3.42233301085281,0,0,0.665320713092027,0,0,0,0,0,0,0,0,0,0|short_description=p@chr3:587825..587862,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C153 | |||
|description=CAGE_peak_at_chr3:587825..587862,+ | |||
|id=chr3:587825..587862,+ | |||
|ontology_enrichment_celltype=CL:0002150!9.98e-20!3;CL:0000861!9.98e-20!3 | |||
|ontology_enrichment_celltype_v019=CL:0002097;1.93e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,1.86e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.00e-42;3 | |||
|ontology_enrichment_disease=DOID:6193!2.31e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:154;2.77e-08;2!DOID:4236;2.77e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,2.87e-08,2;DOID:4236,2.87e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002680!1.64e-17!9;UBERON:0001895!1.64e-17!9;UBERON:0010092!1.64e-17!9;UBERON:0003076!1.10e-14!15;UBERON:0003057!1.10e-14!15;UBERON:0000341!8.65e-14!2;UBERON:0004733!4.35e-13!12;UBERON:0002028!4.35e-13!12;UBERON:0007277!4.35e-13!12;UBERON:0004732!4.57e-12!13;UBERON:0002037!2.32e-10!6;UBERON:0006215!2.32e-10!6;UBERON:0000988!4.18e-09!3;UBERON:0007029!5.96e-08!1;UBERON:0002426!1.22e-07!1;UBERON:0003831!1.22e-07!1;UBERON:0003898!1.22e-07!1;UBERON:0004830!1.22e-07!1;UBERON:0001774!1.22e-07!1;UBERON:0003830!1.22e-07!1;UBERON:0005175!1.22e-07!1;UBERON:0003897!1.22e-07!1;UBERON:0001103!1.22e-07!1;UBERON:0010084!1.22e-07!1;UBERON:0001882!3.17e-07!1;UBERON:0005403!3.17e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;9.23e-22;6!UBERON:0007029;1.07e-15;1!UBERON:0002680;9.75e-15;9!UBERON:0001895;9.75e-15;9!UBERON:0004733;3.30e-11;12!UBERON:0002028;3.30e-11;12!UBERON:0004732;2.17e-10;13!UBERON:0000341;1.44e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,8.29e-22,6;UBERON:0006215,8.29e-22,6;UBERON:0007029,1.16e-15,1;UBERON:0002680,9.09e-15,9;UBERON:0001895,9.09e-15,9;UBERON:0010092,9.09e-15,9;UBERON:0004733,3.13e-11,12;UBERON:0002028,3.13e-11,12;UBERON:0007277,3.13e-11,12;UBERON:0004732,2.06e-10,13;UBERON:0003076,4.24e-09,15;UBERON:0003057,4.24e-09,15;UBERON:0000341,1.39e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0.137836572484531,0,0,0,2.1367688555217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1482867571099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0.874813840149763,1.38899995946634,0,0,1.52581736317083,7.96170671504817,2.95547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,1.35458863804719,1.5348756588099,0.739039113478883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.936669811613763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64550705337374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0,0,0,0,0,0,0,0,0,0,0,0,35.4670875497262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,13.9177731760584,7.28566489588709,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,10.2367705529408,0,0,0,0,0.404234377916439,0,3.42233301085281,0,0,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:587825..587862,+ | |||
}} |
Revision as of 01:04, 13 September 2013
Short description: | p@chr3:587825..587862, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:587825..587862, + |
Coexpression cluster: | C153_rhabdomyosarcoma_liposarcoma_pancreatic_somatostatinoma_Reticulocytes_lymphoma_testicular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 1.86e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 8.29e-22 | 6 |
rhombic lip | 8.29e-22 | 6 |
surface | 1.16e-15 | 1 |
regional part of metencephalon | 9.09e-15 | 9 |
metencephalon | 9.09e-15 | 9 |
future metencephalon | 9.09e-15 | 9 |
segmental subdivision of hindbrain | 3.13e-11 | 12 |
hindbrain | 3.13e-11 | 12 |
presumptive hindbrain | 3.13e-11 | 12 |
segmental subdivision of nervous system | 2.06e-10 | 13 |
posterior neural tube | 4.24e-09 | 15 |
chordal neural plate | 4.24e-09 | 15 |
throat | 1.39e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 2.87e-08 | 2 |
carcinosarcoma | 2.87e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.