FFCP PHASE1:Hg19::chr4:106815585..106815594,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=255743|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=27405|TSSclassifier=N|UniProt=D6RE63|association_with_transcript=-337bp_to_ENST00000504304_5end|description=CAGE_peak_19_at_NPNT_5end|id=chr4:106815585..106815594,+|ontology_enrichment_celltype=CL:0000575!3.35e-12!2|ontology_enrichment_celltype_v019=CL:0002327;8.81e-14;4|ontology_enrichment_celltype_v019_2=CL:0002327,8.82e-14,4|ontology_enrichment_development_v019=UBERON:0008425;1.46e-50;1!UBERON:0008947;7.15e-08;29|ontology_enrichment_disease=DOID:5093!1.52e-13!4;DOID:1612!1.52e-13!4;DOID:305!6.08e-13!106;DOID:0050687!9.70e-10!143;DOID:630!3.73e-07!1;DOID:0050177!3.73e-07!1;DOID:0050427!3.73e-07!1|ontology_enrichment_disease_v019=DOID:5093;4.00e-50;4!DOID:1612;4.00e-50;4|ontology_enrichment_disease_v019_2=DOID:5093,3.11e-50,4;DOID:1612,3.11e-50,4;DOID:305,2.62e-08,106|ontology_enrichment_uberon=UBERON:0001737!5.61e-49!9;UBERON:0001557!2.10e-22!19;UBERON:0008947!6.79e-13!38;UBERON:0003258!6.79e-13!38;UBERON:0000065!9.93e-09!53;UBERON:0000072!2.38e-08!46;UBERON:0000063!3.00e-08!97;UBERON:0001154!8.27e-07!1;UBERON:0001153!8.27e-07!1|ontology_enrichment_uberon_v019=UBERON:0001737;6.41e-23;9!UBERON:0001557;6.41e-23;9!UBERON:0000310;7.72e-21;10!UBERON:0001443;4.69e-19;11!UBERON:0001911;8.81e-14;4|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.17e-23,9;UBERON:0000310,6.99e-21,10;UBERON:0001443,4.28e-19,11;UBERON:0001911,8.82e-14,4;UBERON:0005333,8.82e-14,4;UBERON:0008425,8.82e-14,4;UBERON:0005311,8.82e-14,4;UBERON:0001557,1.91e-11,19;UBERON:0000076,1.49e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473227200159376,1.01150814046861,0.241011029883482,0.110293972732394,1.52515610864684,0.71181185733329,0.808987848960987,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,1.58040879591855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,2.36141999989728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0.385870790539723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961705476909699|short_description=p19@NPNT}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=255743 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27405 | |||
|TSSclassifier=N | |||
|UniProt=D6RE63 | |||
|association_with_transcript=-337bp_to_ENST00000504304_5end | |||
|description=CAGE_peak_19_at_NPNT_5end | |||
|id=chr4:106815585..106815594,+ | |||
|ontology_enrichment_celltype=CL:0000575!3.35e-12!2 | |||
|ontology_enrichment_celltype_v019=CL:0002327;8.81e-14;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,8.82e-14,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.46e-50;1!UBERON:0008947;7.15e-08;29 | |||
|ontology_enrichment_disease=DOID:5093!1.52e-13!4;DOID:1612!1.52e-13!4;DOID:305!6.08e-13!106;DOID:0050687!9.70e-10!143;DOID:630!3.73e-07!1;DOID:0050177!3.73e-07!1;DOID:0050427!3.73e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:5093;4.00e-50;4!DOID:1612;4.00e-50;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,3.11e-50,4;DOID:1612,3.11e-50,4;DOID:305,2.62e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.61e-49!9;UBERON:0001557!2.10e-22!19;UBERON:0008947!6.79e-13!38;UBERON:0003258!6.79e-13!38;UBERON:0000065!9.93e-09!53;UBERON:0000072!2.38e-08!46;UBERON:0000063!3.00e-08!97;UBERON:0001154!8.27e-07!1;UBERON:0001153!8.27e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.41e-23;9!UBERON:0001557;6.41e-23;9!UBERON:0000310;7.72e-21;10!UBERON:0001443;4.69e-19;11!UBERON:0001911;8.81e-14;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.17e-23,9;UBERON:0000310,6.99e-21,10;UBERON:0001443,4.28e-19,11;UBERON:0001911,8.82e-14,4;UBERON:0005333,8.82e-14,4;UBERON:0008425,8.82e-14,4;UBERON:0005311,8.82e-14,4;UBERON:0001557,1.91e-11,19;UBERON:0000076,1.49e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473227200159376,1.01150814046861,0.241011029883482,0.110293972732394,1.52515610864684,0.71181185733329,0.808987848960987,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,1.58040879591855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,2.36141999989728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0.385870790539723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961705476909699 | |||
|short_description=p19@NPNT | |||
}} |
Revision as of 01:56, 13 September 2013
Short description: | p19@NPNT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_NPNT_5end |
Coexpression cluster: | NA |
Association with transcript: | -337bp_to_ENST00000504304_5end |
EntrezGene: | NPNT |
HGNC: | 27405 |
UniProt: | D6RE63 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 8.82e-14 | 4 |
Ontology term | p-value | n |
---|---|---|
larynx | 7.17e-23 | 9 |
breast | 6.99e-21 | 10 |
chest | 4.28e-19 | 11 |
mammary gland | 8.82e-14 | 4 |
mammary bud | 8.82e-14 | 4 |
mammary ridge | 8.82e-14 | 4 |
mammary placode | 8.82e-14 | 4 |
upper respiratory tract | 1.91e-11 | 19 |
external ectoderm | 1.49e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 3.11e-50 | 4 |
breast cancer | 3.11e-50 | 4 |
carcinoma | 2.62e-08 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.