FFCP PHASE1:Hg19::chr4:38784572..38784589,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=81793|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15634|TSSclassifier=S|UniProt=Q9BXR5|association_with_transcript=0bp_to_ENST00000308973,ENST00000361424,uc003gtj.2,uc003gtk.2_5end|coexpression_cluster_id=C651|description=CAGE_peak_2_at_TLR10_5end|id=chr4:38784572..38784589,-|ontology_enrichment_celltype=CL:0000945!5.98e-37!24;CL:0000826!5.98e-37!24;CL:0000236!3.13e-24!14;CL:0000542!7.06e-15!53;CL:0000051!7.06e-15!53;CL:0000838!7.43e-14!52;CL:0002087!1.23e-11!119;CL:0000738!1.32e-09!140;CL:0002031!5.25e-08!124;CL:0000037!7.99e-08!172;CL:0000566!7.99e-08!172;CL:0000988!8.73e-07!182|ontology_enrichment_celltype_v019=CL:0000945;3.97e-81;24!CL:0000236;2.75e-48;13!CL:0000542;4.46e-23;53|ontology_enrichment_celltype_v019_2=CL:0000945,3.58e-81,24;CL:0000826,3.58e-81,24;CL:0000236,5.01e-52,14;CL:0000542,1.39e-36,53;CL:0000051,1.39e-36,53;CL:0000838,3.79e-34,52;CL:0002087,1.17e-14,115;CL:0000738,1.28e-12,136;CL:0002031,1.71e-12,120;CL:0000817,6.35e-12,3;CL:0000037,6.01e-10,168;CL:0002032,1.12e-09,161;CL:0000837,1.12e-09,161;CL:0000988,4.01e-09,177;CL:0000785,1.06e-08,2;CL:0000955,1.06e-08,2;CL:0000818,1.06e-08,2;CL:0000954,1.06e-08,2;CL:0000816,1.06e-08,2|ontology_enrichment_development_v019=CL:0000051;4.46e-23;53!UBERON:0004872;5.52e-09;7!CL:0000954;1.08e-08;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060058;1.96e-13;10|ontology_enrichment_disease_v019_2=DOID:0060058,1.94e-13,10|ontology_enrichment_uberon=UBERON:0007023!5.82e-41!115;UBERON:0001049!1.79e-18!57;UBERON:0005068!1.79e-18!57;UBERON:0006241!1.79e-18!57;UBERON:0007135!1.79e-18!57;UBERON:0000178!1.19e-13!15;UBERON:0000179!1.19e-13!15;UBERON:0000463!1.19e-13!15;UBERON:0002616!1.23e-13!59;UBERON:0001017!1.63e-13!82;UBERON:0002780!1.73e-13!41;UBERON:0001890!1.73e-13!41;UBERON:0006240!1.73e-13!41;UBERON:0005743!2.71e-13!86;UBERON:0003080!5.09e-13!42;UBERON:0000955!2.72e-12!69;UBERON:0006238!2.72e-12!69;UBERON:0002020!1.91e-11!34;UBERON:0003528!1.91e-11!34;UBERON:0001893!2.51e-11!34;UBERON:0000073!3.99e-11!94;UBERON:0001016!3.99e-11!94;UBERON:0003075!9.06e-11!86;UBERON:0007284!9.06e-11!86;UBERON:0002791!1.34e-10!33;UBERON:0002346!6.67e-10!90;UBERON:0001869!1.50e-09!32;UBERON:0003056!7.05e-08!61;UBERON:0002308!1.30e-07!9;UBERON:0000125!1.30e-07!9;UBERON:0002619!1.54e-07!22;UBERON:0000153!4.42e-07!129;UBERON:0007811!4.42e-07!129;UBERON:0003076!8.33e-07!15;UBERON:0003057!8.33e-07!15|ontology_enrichment_uberon_v019=UBERON:0000178;5.58e-18;15!UBERON:0000179;5.58e-18;15!UBERON:0000463;5.58e-18;15!UBERON:0002390;7.28e-13;32!UBERON:0002106;2.94e-12;3!UBERON:0002193;1.17e-09;42!UBERON:0004177;1.63e-07;5!UBERON:0005057;1.63e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.76e-18,15;UBERON:0000179,5.76e-18,15;UBERON:0000463,5.76e-18,15;UBERON:0002106,3.36e-12,3;UBERON:0004854,3.36e-12,3;UBERON:0009034,3.36e-12,3;UBERON:0002095,3.36e-12,3;UBERON:0004782,3.36e-12,3;UBERON:0003281,3.36e-12,3;UBERON:0009664,3.36e-12,3;UBERON:0002296,3.36e-12,3;UBERON:0005602,3.36e-12,3;UBERON:0001179,3.36e-12,3;UBERON:0006293,3.36e-12,3;UBERON:0007023,8.88e-10,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.9571503507685,17.9800290895381,17.0802395450684,0,0,0,0,0,0,14.7962353108376,16.3494617360535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0.736555271975129,0,1.47878700418359,0.425208599930087,0.209658645508376,0,0.150176892841506,0.16072558669708,0.285012743741249,0.59675003159727,0.91332076882317,35.1992488922645,24.5762375067959,15.1216573156804,23.4701622411579,27.6273231054849,17.817325638589,20.4923910563307,24.8053976179195,4.55370375287559,4.11066032559657,7.64546456250458,1.32171328579026,0,1.58030450865046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0.953962497221368,0.571994910780128,3.34311751196608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,9.13405696617905,3.82318603571188,1.70894156152249,4.04994018278241,2.05681136543097,3.24236655596359,1.08006287447623,3.17250070517708,0,0,0.245040215981032,6.31730795427444,2.45257662059956,0,0,0,0,0.211673582723883,0,0,0.456469358066384,0,0,1.35433422241283,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=81793 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15634 | |||
|TSSclassifier=S | |||
|UniProt=Q9BXR5 | |||
|association_with_transcript=0bp_to_ENST00000308973,ENST00000361424,uc003gtj.2,uc003gtk.2_5end | |||
|coexpression_cluster_id=C651 | |||
|description=CAGE_peak_2_at_TLR10_5end | |||
|id=chr4:38784572..38784589,- | |||
|ontology_enrichment_celltype=CL:0000945!5.98e-37!24;CL:0000826!5.98e-37!24;CL:0000236!3.13e-24!14;CL:0000542!7.06e-15!53;CL:0000051!7.06e-15!53;CL:0000838!7.43e-14!52;CL:0002087!1.23e-11!119;CL:0000738!1.32e-09!140;CL:0002031!5.25e-08!124;CL:0000037!7.99e-08!172;CL:0000566!7.99e-08!172;CL:0000988!8.73e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.97e-81;24!CL:0000236;2.75e-48;13!CL:0000542;4.46e-23;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.58e-81,24;CL:0000826,3.58e-81,24;CL:0000236,5.01e-52,14;CL:0000542,1.39e-36,53;CL:0000051,1.39e-36,53;CL:0000838,3.79e-34,52;CL:0002087,1.17e-14,115;CL:0000738,1.28e-12,136;CL:0002031,1.71e-12,120;CL:0000817,6.35e-12,3;CL:0000037,6.01e-10,168;CL:0002032,1.12e-09,161;CL:0000837,1.12e-09,161;CL:0000988,4.01e-09,177;CL:0000785,1.06e-08,2;CL:0000955,1.06e-08,2;CL:0000818,1.06e-08,2;CL:0000954,1.06e-08,2;CL:0000816,1.06e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000051;4.46e-23;53!UBERON:0004872;5.52e-09;7!CL:0000954;1.08e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.96e-13;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.94e-13,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.82e-41!115;UBERON:0001049!1.79e-18!57;UBERON:0005068!1.79e-18!57;UBERON:0006241!1.79e-18!57;UBERON:0007135!1.79e-18!57;UBERON:0000178!1.19e-13!15;UBERON:0000179!1.19e-13!15;UBERON:0000463!1.19e-13!15;UBERON:0002616!1.23e-13!59;UBERON:0001017!1.63e-13!82;UBERON:0002780!1.73e-13!41;UBERON:0001890!1.73e-13!41;UBERON:0006240!1.73e-13!41;UBERON:0005743!2.71e-13!86;UBERON:0003080!5.09e-13!42;UBERON:0000955!2.72e-12!69;UBERON:0006238!2.72e-12!69;UBERON:0002020!1.91e-11!34;UBERON:0003528!1.91e-11!34;UBERON:0001893!2.51e-11!34;UBERON:0000073!3.99e-11!94;UBERON:0001016!3.99e-11!94;UBERON:0003075!9.06e-11!86;UBERON:0007284!9.06e-11!86;UBERON:0002791!1.34e-10!33;UBERON:0002346!6.67e-10!90;UBERON:0001869!1.50e-09!32;UBERON:0003056!7.05e-08!61;UBERON:0002308!1.30e-07!9;UBERON:0000125!1.30e-07!9;UBERON:0002619!1.54e-07!22;UBERON:0000153!4.42e-07!129;UBERON:0007811!4.42e-07!129;UBERON:0003076!8.33e-07!15;UBERON:0003057!8.33e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.58e-18;15!UBERON:0000179;5.58e-18;15!UBERON:0000463;5.58e-18;15!UBERON:0002390;7.28e-13;32!UBERON:0002106;2.94e-12;3!UBERON:0002193;1.17e-09;42!UBERON:0004177;1.63e-07;5!UBERON:0005057;1.63e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.76e-18,15;UBERON:0000179,5.76e-18,15;UBERON:0000463,5.76e-18,15;UBERON:0002106,3.36e-12,3;UBERON:0004854,3.36e-12,3;UBERON:0009034,3.36e-12,3;UBERON:0002095,3.36e-12,3;UBERON:0004782,3.36e-12,3;UBERON:0003281,3.36e-12,3;UBERON:0009664,3.36e-12,3;UBERON:0002296,3.36e-12,3;UBERON:0005602,3.36e-12,3;UBERON:0001179,3.36e-12,3;UBERON:0006293,3.36e-12,3;UBERON:0007023,8.88e-10,114 | |||
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|short_description=p2@TLR10 | |||
}} |
Revision as of 10:48, 13 September 2013
Short description: | p2@TLR10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_TLR10_5end |
Coexpression cluster: | C651_splenic_CD19_B_xeroderma_plasma_Burkitt_lymphoma |
Association with transcript: | 0bp_to_ENST00000308973, ENST00000361424, uc003gtj.2, uc003gtk.2_5end |
EntrezGene: | TLR10 |
HGNC: | 15634 |
UniProt: | Q9BXR5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.58e-81 | 24 |
pro-B cell | 3.58e-81 | 24 |
B cell | 5.01e-52 | 14 |
lymphocyte | 1.39e-36 | 53 |
common lymphoid progenitor | 1.39e-36 | 53 |
lymphoid lineage restricted progenitor cell | 3.79e-34 | 52 |
nongranular leukocyte | 1.17e-14 | 115 |
leukocyte | 1.28e-12 | 136 |
hematopoietic lineage restricted progenitor cell | 1.71e-12 | 120 |
precursor B cell | 6.35e-12 | 3 |
hematopoietic stem cell | 6.01e-10 | 168 |
hematopoietic oligopotent progenitor cell | 1.12e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.12e-09 | 161 |
hematopoietic cell | 4.01e-09 | 177 |
mature B cell | 1.06e-08 | 2 |
pre-B-II cell | 1.06e-08 | 2 |
transitional stage B cell | 1.06e-08 | 2 |
small pre-B-II cell | 1.06e-08 | 2 |
immature B cell | 1.06e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 5.76e-18 | 15 |
haemolymphatic fluid | 5.76e-18 | 15 |
organism substance | 5.76e-18 | 15 |
spleen | 3.36e-12 | 3 |
gastrointestinal system mesentery | 3.36e-12 | 3 |
stomach region | 3.36e-12 | 3 |
mesentery | 3.36e-12 | 3 |
gastrointestinal system serosa | 3.36e-12 | 3 |
mesentery of stomach | 3.36e-12 | 3 |
gut mesentery | 3.36e-12 | 3 |
dorsal mesentery | 3.36e-12 | 3 |
dorsal mesogastrium | 3.36e-12 | 3 |
peritoneal cavity | 3.36e-12 | 3 |
spleen primordium | 3.36e-12 | 3 |
adult organism | 8.88e-10 | 114 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.94e-13 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.