FFCP PHASE1:Mm9::chr16:34081884..34081907,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=58|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:34081884..34081907,-|id=chr16:34081884..34081907,-|ontology_enrichment_celltype=CL:0000239!1.62e-09!6;CL:0000677!1.62e-09!6;CL:0000212!1.62e-09!6;CL:0000584!1.62e-09!6;CL:0000075!5.78e-08!7|ontology_enrichment_celltype_v019_2=CL:0000239,4.48e-23,6;CL:0000677,4.48e-23,6;CL:0000584,4.48e-23,6;CL:0000075,1.04e-19,7;CL:0002563,3.27e-15,9;CL:0002251,3.27e-15,9;CL:0000682,8.08e-13,3;CL:0000066,1.90e-11,25;CL:0002076,6.72e-09,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!7.56e-13!15;UBERON:0001242!3.09e-10!13;UBERON:0000060!3.09e-10!13;UBERON:0001262!3.09e-10!13;UBERON:0004786!3.09e-10!13;UBERON:0004923!8.60e-08!24|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.14e-29,15;UBERON:0000160,1.23e-27,31;UBERON:0001242,2.52e-22,13;UBERON:0001262,2.52e-22,13;UBERON:0004786,2.52e-22,13;UBERON:0004923,1.50e-17,24;UBERON:0005409,3.08e-17,47;UBERON:0003350,3.27e-15,9;UBERON:0004808,3.27e-15,9;UBERON:0001277,3.27e-15,9;UBERON:0000485,2.40e-12,11;UBERON:0001962,3.35e-09,2;UBERON:0001961,3.35e-09,2;UBERON:0001744,3.35e-09,2;UBERON:0002108,2.10e-08,4;UBERON:0001007,3.44e-07,116;UBERON:0001555,3.44e-07,116;UBERON:0007026,3.44e-07,116;UBERON:0004119,5.19e-07,118;UBERON:0000925,5.19e-07,118;UBERON:0006595,5.19e-07,118;UBERON:0000014,5.81e-07,5;UBERON:0001003,5.81e-07,5;UBERON:0002097,5.81e-07,5;UBERON:0002199,5.81e-07,5;UBERON:0007029,5.81e-07,5;UBERON:0007376,5.81e-07,5;UBERON:0002416,5.81e-07,5;UBERON:0007383,5.81e-07,5|phase1_expression=0,6.2815573375085,7.27998783023258,2.41971369045464,4.00716583957078,3.52546471014969,3.73780224952841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.39969691173627,7.79991555628378,7.46501553349526,6.03066794622705,6.89507944594845,0.760093677825496,1.26015064879965,2.21730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0.209446706813455,1.53274233125155,0,0,0,0,0,0,0.173824320192276,0,0,0.162241263067758,0,0.373220911830279,0,0.420883711772948,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0.329119699826961,0.492502392237286,0.56748166682099,0.438599962275997,0.439100230582101,0.268412837520744,0,0,2.31293148088659,1.85115396664481,0,0,0,0.201683524623343,0,0,2.84717436926707,0,0,0,0,1.79763881730844,2.80979464837102,2.19055400579804,0,0,0,0.203651327845314,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,1.81374878235628,0,0.784068024066026,1.07435109602823,2.9545361954111,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0.134864346384821,0,0.26175594198403,0.648074866458964,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.453460767230423,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0.412070114477788,0,0,0.25347929989024,0,0,0.0640251524048693,0.0574354689556133,0.476293691283074,0.231768651889711,0,0,0,0.685738504770831,0.177475806159338,0,0.145346416632329,0,0.169229215783353,0,0,0,0,0,0,0,0,0,0,0.467863216890817,0,0,0,0.231867835620421|short_description=p@chr16:34081884..34081907,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:34081884..34081907,- | |||
|id=chr16:34081884..34081907,- | |||
|ontology_enrichment_celltype=CL:0000239!1.62e-09!6;CL:0000677!1.62e-09!6;CL:0000212!1.62e-09!6;CL:0000584!1.62e-09!6;CL:0000075!5.78e-08!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.48e-23,6;CL:0000677,4.48e-23,6;CL:0000584,4.48e-23,6;CL:0000075,1.04e-19,7;CL:0002563,3.27e-15,9;CL:0002251,3.27e-15,9;CL:0000682,8.08e-13,3;CL:0000066,1.90e-11,25;CL:0002076,6.72e-09,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!7.56e-13!15;UBERON:0001242!3.09e-10!13;UBERON:0000060!3.09e-10!13;UBERON:0001262!3.09e-10!13;UBERON:0004786!3.09e-10!13;UBERON:0004923!8.60e-08!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.14e-29,15;UBERON:0000160,1.23e-27,31;UBERON:0001242,2.52e-22,13;UBERON:0001262,2.52e-22,13;UBERON:0004786,2.52e-22,13;UBERON:0004923,1.50e-17,24;UBERON:0005409,3.08e-17,47;UBERON:0003350,3.27e-15,9;UBERON:0004808,3.27e-15,9;UBERON:0001277,3.27e-15,9;UBERON:0000485,2.40e-12,11;UBERON:0001962,3.35e-09,2;UBERON:0001961,3.35e-09,2;UBERON:0001744,3.35e-09,2;UBERON:0002108,2.10e-08,4;UBERON:0001007,3.44e-07,116;UBERON:0001555,3.44e-07,116;UBERON:0007026,3.44e-07,116;UBERON:0004119,5.19e-07,118;UBERON:0000925,5.19e-07,118;UBERON:0006595,5.19e-07,118;UBERON:0000014,5.81e-07,5;UBERON:0001003,5.81e-07,5;UBERON:0002097,5.81e-07,5;UBERON:0002199,5.81e-07,5;UBERON:0007029,5.81e-07,5;UBERON:0007376,5.81e-07,5;UBERON:0002416,5.81e-07,5;UBERON:0007383,5.81e-07,5 | |||
|phase1_expression=0,6.2815573375085,7.27998783023258,2.41971369045464,4.00716583957078,3.52546471014969,3.73780224952841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.39969691173627,7.79991555628378,7.46501553349526,6.03066794622705,6.89507944594845,0.760093677825496,1.26015064879965,2.21730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0.209446706813455,1.53274233125155,0,0,0,0,0,0,0.173824320192276,0,0,0.162241263067758,0,0.373220911830279,0,0.420883711772948,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0.329119699826961,0.492502392237286,0.56748166682099,0.438599962275997,0.439100230582101,0.268412837520744,0,0,2.31293148088659,1.85115396664481,0,0,0,0.201683524623343,0,0,2.84717436926707,0,0,0,0,1.79763881730844,2.80979464837102,2.19055400579804,0,0,0,0.203651327845314,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,1.81374878235628,0,0.784068024066026,1.07435109602823,2.9545361954111,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0.134864346384821,0,0.26175594198403,0.648074866458964,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.453460767230423,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0.412070114477788,0,0,0.25347929989024,0,0,0.0640251524048693,0.0574354689556133,0.476293691283074,0.231768651889711,0,0,0,0.685738504770831,0.177475806159338,0,0.145346416632329,0,0.169229215783353,0,0,0,0,0,0,0,0,0,0,0.467863216890817,0,0,0,0.231867835620421 | |||
|short_description=p@chr16:34081884..34081907,- | |||
}} |
Revision as of 12:30, 13 September 2013
Short description: | p@chr16:34081884..34081907, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:34081884..34081907, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.48e-23 | 6 |
gut absorptive cell | 4.48e-23 | 6 |
enterocyte | 4.48e-23 | 6 |
columnar/cuboidal epithelial cell | 1.04e-19 | 7 |
intestinal epithelial cell | 3.27e-15 | 9 |
epithelial cell of alimentary canal | 3.27e-15 | 9 |
M cell of gut | 8.08e-13 | 3 |
epithelial cell | 1.90e-11 | 25 |
endo-epithelial cell | 6.72e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.14e-29 | 15 |
intestine | 1.23e-27 | 31 |
intestinal mucosa | 2.52e-22 | 13 |
wall of intestine | 2.52e-22 | 13 |
gastrointestinal system mucosa | 2.52e-22 | 13 |
organ component layer | 1.50e-17 | 24 |
gastrointestinal system | 3.08e-17 | 47 |
epithelium of mucosa | 3.27e-15 | 9 |
gastrointestinal system epithelium | 3.27e-15 | 9 |
intestinal epithelium | 3.27e-15 | 9 |
simple columnar epithelium | 2.40e-12 | 11 |
gut-associated lymphoid tissue | 3.35e-09 | 2 |
mucosa-associated lymphoid tissue | 3.35e-09 | 2 |
lymphoid tissue | 3.35e-09 | 2 |
small intestine | 2.10e-08 | 4 |
digestive system | 3.44e-07 | 116 |
digestive tract | 3.44e-07 | 116 |
primitive gut | 3.44e-07 | 116 |
endoderm-derived structure | 5.19e-07 | 118 |
endoderm | 5.19e-07 | 118 |
presumptive endoderm | 5.19e-07 | 118 |
zone of skin | 5.81e-07 | 5 |
skin epidermis | 5.81e-07 | 5 |
skin of body | 5.81e-07 | 5 |
integument | 5.81e-07 | 5 |
surface | 5.81e-07 | 5 |
outer epithelium | 5.81e-07 | 5 |
integumental system | 5.81e-07 | 5 |
enveloping layer of ectoderm | 5.81e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.