FFCP PHASE1:Hg19::chr5:121490583..121490596,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=W|UniProt=|association_with_transcript=-32bp_to_ENST00000504829_5end|coexpression_cluster_id=C614|description=CAGE_peak_1_at_ENST00000504829_5end|id=chr5:121490583..121490596,-|ontology_enrichment_celltype=CL:0002615!3.24e-09!3;CL:0002195!6.63e-07!2;CL:0002571!6.63e-07!2|ontology_enrichment_celltype_v019=CL:0002195;3.93e-29;2!CL:0002571;3.93e-29;2!CL:0002615;8.65e-20;3!CL:0000342;6.92e-16;1!CL:0002565;6.92e-16;1!CL:0000222;1.78e-15;1!CL:0002581;1.78e-15;1!CL:0000136;1.73e-10;13!CL:0002617;1.34e-08;2!CL:0002561;2.15e-08;2!CL:0002600;2.15e-08;2|ontology_enrichment_celltype_v019_2=CL:0002195,1.08e-29,2;CL:0002571,1.08e-29,2;CL:0002615,1.53e-19,3;CL:0000342,6.44e-16,1;CL:0002565,6.44e-16,1;CL:0002581,1.34e-15,1;CL:0000136,4.36e-09,15;CL:0002617,1.39e-08,2;CL:0002561,2.00e-08,2;CL:0002600,2.87e-08,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003688!2.30e-07!6;UBERON:0002358!2.30e-07!6;UBERON:0003684!2.30e-07!6;UBERON:0001178!2.30e-07!6|ontology_enrichment_uberon_v019=UBERON:0007195;5.55e-16;1!UBERON:0002506;6.92e-16;1!UBERON:0001769;6.92e-16;1!UBERON:0003688;2.19e-10;6!UBERON:0002358;2.19e-10;6!UBERON:0003684;2.19e-10;6!UBERON:0001178;2.19e-10;6!UBERON:0005933;2.15e-08;2!UBERON:0005942;2.15e-08;2!UBERON:0005406;2.15e-08;2!UBERON:0005932;2.15e-08;2!UBERON:0004457;3.24e-07;9!UBERON:0000042;3.24e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0007195,5.56e-16,1;UBERON:0002506,6.44e-16,1;UBERON:0001769,6.44e-16,1;UBERON:0003688,2.90e-10,6;UBERON:0002358,2.90e-10,6;UBERON:0003684,2.90e-10,6;UBERON:0001178,2.90e-10,6;UBERON:0005406,1.86e-08,2;UBERON:0005933,2.00e-08,2;UBERON:0005942,2.00e-08,2;UBERON:0005932,2.00e-08,2|phase1_expression=2.18014055124668,0.642301571672949,0.845726424575827,1.0007329835313,1.34088328328186,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0.123766352960047,0.331397375727916,0,0,0,0,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0.926864265692532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,1.4351170855109,0.213557388818567,0,0,0.103052529238439,0,0,0,0.194874010322397,0.757301322732344,0.0920498986422993,0,0,0.302256294682921,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23038153388083,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87192013766656,0,0.258543431515556,0,0,0,0,0,0,0,1.71573592389777,1.62786481617433,0.823240336780769,0,1.77695974371273,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.415941723061614,0.356857977594324,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0.818999468447914,0,0,0,0,0,1.15755106853338,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0023291130173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.104909176269996,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0.380805212168795,0.813741466409323,0,0,0,0,0,0,0.336749488765919,1.26184898228651,0,0,0,0,0.463044948647668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.771741581079447,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0.23806443146374,0,0.0620747142958579,0.560659312903067,1.20929600728513,0,0,0,0,0.0717222053926763,0.665320713092027,0,0,0,0,0,0,0,0,0,0|short_description=p1@ENST00000504829}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-32bp_to_ENST00000504829_5end | |||
|coexpression_cluster_id=C614 | |||
|description=CAGE_peak_1_at_ENST00000504829_5end | |||
|id=chr5:121490583..121490596,- | |||
|ontology_enrichment_celltype=CL:0002615!3.24e-09!3;CL:0002195!6.63e-07!2;CL:0002571!6.63e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002195;3.93e-29;2!CL:0002571;3.93e-29;2!CL:0002615;8.65e-20;3!CL:0000342;6.92e-16;1!CL:0002565;6.92e-16;1!CL:0000222;1.78e-15;1!CL:0002581;1.78e-15;1!CL:0000136;1.73e-10;13!CL:0002617;1.34e-08;2!CL:0002561;2.15e-08;2!CL:0002600;2.15e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002195,1.08e-29,2;CL:0002571,1.08e-29,2;CL:0002615,1.53e-19,3;CL:0000342,6.44e-16,1;CL:0002565,6.44e-16,1;CL:0002581,1.34e-15,1;CL:0000136,4.36e-09,15;CL:0002617,1.39e-08,2;CL:0002561,2.00e-08,2;CL:0002600,2.87e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!2.30e-07!6;UBERON:0002358!2.30e-07!6;UBERON:0003684!2.30e-07!6;UBERON:0001178!2.30e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;5.55e-16;1!UBERON:0002506;6.92e-16;1!UBERON:0001769;6.92e-16;1!UBERON:0003688;2.19e-10;6!UBERON:0002358;2.19e-10;6!UBERON:0003684;2.19e-10;6!UBERON:0001178;2.19e-10;6!UBERON:0005933;2.15e-08;2!UBERON:0005942;2.15e-08;2!UBERON:0005406;2.15e-08;2!UBERON:0005932;2.15e-08;2!UBERON:0004457;3.24e-07;9!UBERON:0000042;3.24e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,5.56e-16,1;UBERON:0002506,6.44e-16,1;UBERON:0001769,6.44e-16,1;UBERON:0003688,2.90e-10,6;UBERON:0002358,2.90e-10,6;UBERON:0003684,2.90e-10,6;UBERON:0001178,2.90e-10,6;UBERON:0005406,1.86e-08,2;UBERON:0005933,2.00e-08,2;UBERON:0005942,2.00e-08,2;UBERON:0005932,2.00e-08,2 | |||
|phase1_expression=2.18014055124668,0.642301571672949,0.845726424575827,1.0007329835313,1.34088328328186,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0.123766352960047,0.331397375727916,0,0,0,0,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0.926864265692532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,1.4351170855109,0.213557388818567,0,0,0.103052529238439,0,0,0,0.194874010322397,0.757301322732344,0.0920498986422993,0,0,0.302256294682921,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23038153388083,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87192013766656,0,0.258543431515556,0,0,0,0,0,0,0,1.71573592389777,1.62786481617433,0.823240336780769,0,1.77695974371273,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.415941723061614,0.356857977594324,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0.818999468447914,0,0,0,0,0,1.15755106853338,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0023291130173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.104909176269996,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0.380805212168795,0.813741466409323,0,0,0,0,0,0,0.336749488765919,1.26184898228651,0,0,0,0,0.463044948647668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.771741581079447,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0.23806443146374,0,0.0620747142958579,0.560659312903067,1.20929600728513,0,0,0,0,0.0717222053926763,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000504829 | |||
}} |
Revision as of 12:53, 13 September 2013
Short description: | p1@ENST00000504829 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000504829_5end |
Coexpression cluster: | C614_bone_mesenchymal_basal_mesodermal_Adipocyte_mature_Myoblast |
Association with transcript: | -32bp_to_ENST00000504829_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 1.08e-29 | 2 |
hepatic mesenchymal stem cell | 1.08e-29 | 2 |
adipocyte of omentum tissue | 1.53e-19 | 3 |
pigment cell (sensu Vertebrata) | 6.44e-16 | 1 |
iris pigment epithelial cell | 6.44e-16 | 1 |
perirenal preadipocyte | 1.34e-15 | 1 |
fat cell | 4.36e-09 | 15 |
adipocyte of breast | 1.39e-08 | 2 |
outer root sheath cell | 2.00e-08 | 2 |
smooth muscle cell of trachea | 2.87e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 5.56e-16 | 1 |
iris epithelium | 6.44e-16 | 1 |
iris | 6.44e-16 | 1 |
omentum | 2.90e-10 | 6 |
peritoneum | 2.90e-10 | 6 |
abdominal cavity | 2.90e-10 | 6 |
visceral peritoneum | 2.90e-10 | 6 |
perirenal fat | 1.86e-08 | 2 |
hair root sheath | 2.00e-08 | 2 |
hair outer root sheath | 2.00e-08 | 2 |
bulb of hair follicle | 2.00e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.