FFCP PHASE1:Hg19::chr5:142415993..142416004,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C4471|description=CAGE_peak_at_chr5:142415993..142416004,+|id=chr5:142415993..142416004,+|ontology_enrichment_celltype=CL:0000738!1.26e-26!140;CL:0002031!1.50e-23!124;CL:0002057!1.83e-22!42;CL:0002032!7.92e-22!165;CL:0000837!7.92e-22!165;CL:0000860!8.60e-21!45;CL:0000037!9.88e-21!172;CL:0000566!9.88e-21!172;CL:0000988!2.60e-19!182;CL:0000557!1.09e-18!71;CL:0002087!2.60e-18!119;CL:0000766!2.66e-17!76;CL:0000839!1.46e-16!70;CL:0000763!9.50e-16!112;CL:0000049!9.50e-16!112;CL:0002009!1.34e-15!65;CL:0002194!7.59e-14!63;CL:0000576!7.59e-14!63;CL:0000040!7.59e-14!63;CL:0000559!7.59e-14!63;CL:0000945!1.08e-11!24;CL:0000826!1.08e-11!24;CL:0000453!1.93e-11!5;CL:0000134!3.18e-07!358;CL:0000946!4.09e-07!1;CL:0000786!4.09e-07!1;CL:0000980!4.09e-07!1;CL:0002127!4.34e-07!1;CL:0000914!4.34e-07!1;CL:0000911!4.34e-07!1;CL:0000814!4.34e-07!1;CL:0002042!4.34e-07!1;CL:0002039!4.34e-07!1;CL:0002040!4.34e-07!1;CL:0002041!4.34e-07!1;CL:0002320!5.54e-07!365|ontology_enrichment_celltype_v019=CL:0000860;1.16e-16;33!CL:0002057;1.16e-16;33!CL:0000473;2.66e-12;39!CL:0000234;2.66e-12;39!CL:0000945;5.00e-10;24!CL:0000576;3.44e-08;48!CL:0002087;4.96e-08;104!CL:0000766;9.01e-07;69|ontology_enrichment_celltype_v019_2=CL:0000860,6.10e-15,42;CL:0002057,6.10e-15,42;CL:0002087,1.16e-13,115;CL:0000473,4.13e-13,48;CL:0000234,4.13e-13,48;CL:0002031,4.25e-13,120;CL:0000738,1.45e-11,136;CL:0002194,1.54e-10,59;CL:0000576,1.54e-10,59;CL:0000040,1.54e-10,59;CL:0000559,1.54e-10,59;CL:0002009,3.32e-10,61;CL:0000945,4.77e-10,24;CL:0000826,4.77e-10,24;CL:0002032,9.03e-10,161;CL:0000837,9.03e-10,161;CL:0000839,1.85e-09,66;CL:0000037,2.31e-09,168;CL:0000557,2.53e-09,67;CL:0000988,6.97e-09,177;CL:0000766,1.07e-08,72|ontology_enrichment_development_v019=CL:0002057;7.48e-13;42|ontology_enrichment_disease=DOID:630!1.42e-07!1;DOID:0050177!1.42e-07!1;DOID:0050427!1.42e-07!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.66e-17!102;UBERON:0003061!1.66e-17!102;UBERON:0002371!3.05e-16!80;UBERON:0002193!1.32e-15!112;UBERON:0002405!4.23e-15!115;UBERON:0001474!6.82e-15!86;UBERON:0004765!3.24e-12!101;UBERON:0001434!3.24e-12!101;UBERON:0004177!5.01e-08!7;UBERON:0002135!2.21e-07!1;UBERON:0003081!3.74e-07!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.96e-08,76;UBERON:0001474,1.14e-07,82;UBERON:0004765,5.23e-07,90;UBERON:0002405,8.67e-07,93|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75088260692625,2.8735206307481,2.51874500203774,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0.619412741790207,0,0.256160706529101,0,0.689491361473237,1.29096936716765,6.77132432971709,0,0,0,0,0,0.639337125799041,0,0,0,0.870627715885752,0.56738522469114,0.622822248995575,0,0,0,1.81619850790011,2.20966581592539,1.89877432464531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.641136984606466|short_description=p@chr5:142415993..142416004,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4471 | |||
|description=CAGE_peak_at_chr5:142415993..142416004,+ | |||
|id=chr5:142415993..142416004,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.26e-26!140;CL:0002031!1.50e-23!124;CL:0002057!1.83e-22!42;CL:0002032!7.92e-22!165;CL:0000837!7.92e-22!165;CL:0000860!8.60e-21!45;CL:0000037!9.88e-21!172;CL:0000566!9.88e-21!172;CL:0000988!2.60e-19!182;CL:0000557!1.09e-18!71;CL:0002087!2.60e-18!119;CL:0000766!2.66e-17!76;CL:0000839!1.46e-16!70;CL:0000763!9.50e-16!112;CL:0000049!9.50e-16!112;CL:0002009!1.34e-15!65;CL:0002194!7.59e-14!63;CL:0000576!7.59e-14!63;CL:0000040!7.59e-14!63;CL:0000559!7.59e-14!63;CL:0000945!1.08e-11!24;CL:0000826!1.08e-11!24;CL:0000453!1.93e-11!5;CL:0000134!3.18e-07!358;CL:0000946!4.09e-07!1;CL:0000786!4.09e-07!1;CL:0000980!4.09e-07!1;CL:0002127!4.34e-07!1;CL:0000914!4.34e-07!1;CL:0000911!4.34e-07!1;CL:0000814!4.34e-07!1;CL:0002042!4.34e-07!1;CL:0002039!4.34e-07!1;CL:0002040!4.34e-07!1;CL:0002041!4.34e-07!1;CL:0002320!5.54e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.16e-16;33!CL:0002057;1.16e-16;33!CL:0000473;2.66e-12;39!CL:0000234;2.66e-12;39!CL:0000945;5.00e-10;24!CL:0000576;3.44e-08;48!CL:0002087;4.96e-08;104!CL:0000766;9.01e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.10e-15,42;CL:0002057,6.10e-15,42;CL:0002087,1.16e-13,115;CL:0000473,4.13e-13,48;CL:0000234,4.13e-13,48;CL:0002031,4.25e-13,120;CL:0000738,1.45e-11,136;CL:0002194,1.54e-10,59;CL:0000576,1.54e-10,59;CL:0000040,1.54e-10,59;CL:0000559,1.54e-10,59;CL:0002009,3.32e-10,61;CL:0000945,4.77e-10,24;CL:0000826,4.77e-10,24;CL:0002032,9.03e-10,161;CL:0000837,9.03e-10,161;CL:0000839,1.85e-09,66;CL:0000037,2.31e-09,168;CL:0000557,2.53e-09,67;CL:0000988,6.97e-09,177;CL:0000766,1.07e-08,72 | |||
|ontology_enrichment_development_v019=CL:0002057;7.48e-13;42 | |||
|ontology_enrichment_disease=DOID:630!1.42e-07!1;DOID:0050177!1.42e-07!1;DOID:0050427!1.42e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.66e-17!102;UBERON:0003061!1.66e-17!102;UBERON:0002371!3.05e-16!80;UBERON:0002193!1.32e-15!112;UBERON:0002405!4.23e-15!115;UBERON:0001474!6.82e-15!86;UBERON:0004765!3.24e-12!101;UBERON:0001434!3.24e-12!101;UBERON:0004177!5.01e-08!7;UBERON:0002135!2.21e-07!1;UBERON:0003081!3.74e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.96e-08,76;UBERON:0001474,1.14e-07,82;UBERON:0004765,5.23e-07,90;UBERON:0002405,8.67e-07,93 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75088260692625,2.8735206307481,2.51874500203774,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0.619412741790207,0,0.256160706529101,0,0.689491361473237,1.29096936716765,6.77132432971709,0,0,0,0,0,0.639337125799041,0,0,0,0.870627715885752,0.56738522469114,0.622822248995575,0,0,0,1.81619850790011,2.20966581592539,1.89877432464531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | |||
|short_description=p@chr5:142415993..142416004,+ | |||
}} |
Revision as of 13:43, 13 September 2013
Short description: | p@chr5:142415993..142416004, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:142415993..142416004, + |
Coexpression cluster: | C4471_CD14_B_b_xeroderma_CD4_Preadipocyte_testicular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.10e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.10e-15 | 42 |
nongranular leukocyte | 1.16e-13 | 115 |
defensive cell | 4.13e-13 | 48 |
phagocyte | 4.13e-13 | 48 |
hematopoietic lineage restricted progenitor cell | 4.25e-13 | 120 |
leukocyte | 1.45e-11 | 136 |
monopoietic cell | 1.54e-10 | 59 |
monocyte | 1.54e-10 | 59 |
monoblast | 1.54e-10 | 59 |
promonocyte | 1.54e-10 | 59 |
macrophage dendritic cell progenitor | 3.32e-10 | 61 |
lymphocyte of B lineage | 4.77e-10 | 24 |
pro-B cell | 4.77e-10 | 24 |
hematopoietic oligopotent progenitor cell | 9.03e-10 | 161 |
hematopoietic multipotent progenitor cell | 9.03e-10 | 161 |
myeloid lineage restricted progenitor cell | 1.85e-09 | 66 |
hematopoietic stem cell | 2.31e-09 | 168 |
granulocyte monocyte progenitor cell | 2.53e-09 | 67 |
hematopoietic cell | 6.97e-09 | 177 |
myeloid leukocyte | 1.07e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.96e-08 | 76 |
bone element | 1.14e-07 | 82 |
skeletal element | 5.23e-07 | 90 |
immune system | 8.67e-07 | 93 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.