FFCP PHASE1:Mm9::chr17:26978464..26978469,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18091|HGNC=|UniProt=P42582,Q3UQU2|association_with_transcript=40bp_to_ENSMUST00000015723,NM_008700,uc008beo.1_5end|description=CAGE_peak_4_at_Nkx2-5_5end|id=chr17:26978464..26978469,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!1.08e-24!18;UBERON:0000948!1.08e-24!18;UBERON:0005498!1.08e-24!18;UBERON:0004140!1.08e-24!18;UBERON:0009881!1.08e-24!18;UBERON:0004141!1.08e-24!18;UBERON:0003084!1.08e-24!18;UBERON:0007005!1.08e-24!18;UBERON:0004139!1.08e-24!18;UBERON:0004291!1.08e-24!18;UBERON:0004872!1.35e-18!33;UBERON:0004535!2.84e-18!23;UBERON:0001009!2.84e-18!23;UBERON:0000945!1.33e-10!16;UBERON:0010039!1.33e-10!16;UBERON:0003103!1.03e-08!43|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.66e-59,18;UBERON:0000948,1.66e-59,18;UBERON:0005498,1.66e-59,18;UBERON:0004140,1.66e-59,18;UBERON:0009881,1.66e-59,18;UBERON:0004141,1.66e-59,18;UBERON:0003084,1.66e-59,18;UBERON:0007005,1.66e-59,18;UBERON:0004139,1.66e-59,18;UBERON:0004291,1.66e-59,18;UBERON:0004535,3.67e-46,23;UBERON:0001009,3.67e-46,23;UBERON:0004872,3.49e-41,33;UBERON:0003103,9.16e-24,43;UBERON:0003914,1.45e-21,47;UBERON:0003081,2.99e-14,87;UBERON:0010314,6.01e-10,92;UBERON:0000926,1.13e-09,120;UBERON:0004120,1.13e-09,120;UBERON:0006603,1.13e-09,120;UBERON:0001048,2.11e-08,134;UBERON:0000025,1.39e-07,114;UBERON:0004111,6.25e-07,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.38527008592305,3.75241695969754,3.24111710629827,4.02466050494857,4.52557733019029,4.01094493507183,1.62773761325285,3.75582761959467,2.45207218971056,1.97471819896177,0.985004784474571,1.62137619091711,1.60819986167866,1.3173006917463,1.34206418760372,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0,1.63934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0.302323556964751,0.377210159511796,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.54051109519089,1.66675074632741,0.188368457004691,0,0.457556346413045,0,0,0,0,0.790839983952838,0.813277868507395,0.216010681643603,0.418176592028937,0.218362563746178,0.269728692769641,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0,0,0.367687016900028,0,0,0,0,0,0.188626341386076,0,0.128050304809739,0.0574354689556133,0,0,0,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0,0,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0,0.192906610981141,0.499621155875892,0.233931608445408,0.214871054048298,0,0,0|short_description=p4@Nkx2-5}} | ||
|EntrezGene=18091 | |||
|HGNC= | |||
|UniProt=P42582,Q3UQU2 | |||
|association_with_transcript=40bp_to_ENSMUST00000015723,NM_008700,uc008beo.1_5end | |||
|description=CAGE_peak_4_at_Nkx2-5_5end | |||
|id=chr17:26978464..26978469,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.08e-24!18;UBERON:0000948!1.08e-24!18;UBERON:0005498!1.08e-24!18;UBERON:0004140!1.08e-24!18;UBERON:0009881!1.08e-24!18;UBERON:0004141!1.08e-24!18;UBERON:0003084!1.08e-24!18;UBERON:0007005!1.08e-24!18;UBERON:0004139!1.08e-24!18;UBERON:0004291!1.08e-24!18;UBERON:0004872!1.35e-18!33;UBERON:0004535!2.84e-18!23;UBERON:0001009!2.84e-18!23;UBERON:0000945!1.33e-10!16;UBERON:0010039!1.33e-10!16;UBERON:0003103!1.03e-08!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.66e-59,18;UBERON:0000948,1.66e-59,18;UBERON:0005498,1.66e-59,18;UBERON:0004140,1.66e-59,18;UBERON:0009881,1.66e-59,18;UBERON:0004141,1.66e-59,18;UBERON:0003084,1.66e-59,18;UBERON:0007005,1.66e-59,18;UBERON:0004139,1.66e-59,18;UBERON:0004291,1.66e-59,18;UBERON:0004535,3.67e-46,23;UBERON:0001009,3.67e-46,23;UBERON:0004872,3.49e-41,33;UBERON:0003103,9.16e-24,43;UBERON:0003914,1.45e-21,47;UBERON:0003081,2.99e-14,87;UBERON:0010314,6.01e-10,92;UBERON:0000926,1.13e-09,120;UBERON:0004120,1.13e-09,120;UBERON:0006603,1.13e-09,120;UBERON:0001048,2.11e-08,134;UBERON:0000025,1.39e-07,114;UBERON:0004111,6.25e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.38527008592305,3.75241695969754,3.24111710629827,4.02466050494857,4.52557733019029,4.01094493507183,1.62773761325285,3.75582761959467,2.45207218971056,1.97471819896177,0.985004784474571,1.62137619091711,1.60819986167866,1.3173006917463,1.34206418760372,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0,1.63934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0.302323556964751,0.377210159511796,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.54051109519089,1.66675074632741,0.188368457004691,0,0.457556346413045,0,0,0,0,0.790839983952838,0.813277868507395,0.216010681643603,0.418176592028937,0.218362563746178,0.269728692769641,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0,0,0.367687016900028,0,0,0,0,0,0.188626341386076,0,0.128050304809739,0.0574354689556133,0,0,0,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0,0,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0,0.192906610981141,0.499621155875892,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p4@Nkx2-5 | |||
}} |
Revision as of 13:50, 13 September 2013
Short description: | p4@Nkx2-5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Nkx2-5_5end |
Coexpression cluster: | NA |
Association with transcript: | 40bp_to_ENSMUST00000015723, NM_008700, uc008beo.1_5end |
EntrezGene: | Nkx2-5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.66e-59 | 18 |
heart | 1.66e-59 | 18 |
primitive heart tube | 1.66e-59 | 18 |
primary heart field | 1.66e-59 | 18 |
anterior lateral plate mesoderm | 1.66e-59 | 18 |
heart tube | 1.66e-59 | 18 |
heart primordium | 1.66e-59 | 18 |
cardiac mesoderm | 1.66e-59 | 18 |
cardiogenic plate | 1.66e-59 | 18 |
heart rudiment | 1.66e-59 | 18 |
cardiovascular system | 3.67e-46 | 23 |
circulatory system | 3.67e-46 | 23 |
splanchnic layer of lateral plate mesoderm | 3.49e-41 | 33 |
compound organ | 9.16e-24 | 43 |
epithelial tube | 1.45e-21 | 47 |
lateral plate mesoderm | 2.99e-14 | 87 |
structure with developmental contribution from neural crest | 6.01e-10 | 92 |
mesoderm | 1.13e-09 | 120 |
mesoderm-derived structure | 1.13e-09 | 120 |
presumptive mesoderm | 1.13e-09 | 120 |
primordium | 2.11e-08 | 134 |
tube | 1.39e-07 | 114 |
anatomical conduit | 6.25e-07 | 122 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.