FFCP PHASE1:Hg19::chr5:172385774..172385809,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=100268168|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000520067,NR_026683,uc011dfb.1_5end|description=CAGE_peak_1_at_LOC100268168_5end|id=chr5:172385774..172385809,-|ontology_enrichment_celltype=CL:0000066!2.48e-17!254;CL:0002321!6.17e-08!248;CL:0000220!8.77e-08!246|ontology_enrichment_celltype_v019=CL:1000507;4.41e-16;10!CL:1000494;4.41e-16;10!CL:1000449;1.01e-12;15!CL:1000497;5.35e-11;17!CL:0002518;5.35e-11;17!CL:0002681;5.92e-10;12!CL:0002584;5.92e-10;12!CL:0000197;9.58e-07;6!CL:0000098;9.58e-07;6!CL:0002167;9.58e-07;6|ontology_enrichment_celltype_v019_2=CL:1000507,5.49e-16,10;CL:1000494,5.49e-16,10;CL:0000066,5.40e-13,253;CL:1000449,1.36e-12,15;CL:1000497,6.91e-11,17;CL:0002518,6.91e-11,17;CL:0002681,7.02e-10,12;CL:0002584,7.02e-10,12|ontology_enrichment_development_v019=UBERON:0008947;1.02e-11;29|ontology_enrichment_disease=DOID:305!1.20e-09!106;DOID:0050687!5.64e-08!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:305,1.42e-08,106;DOID:0050687,7.49e-07,143|ontology_enrichment_uberon=UBERON:0003104!6.15e-10!238;UBERON:0009142!6.15e-10!238;UBERON:0000464!1.71e-08!104;UBERON:0000058!5.22e-08!26;UBERON:0002100!6.10e-08!216;UBERON:0008947!6.39e-08!38;UBERON:0003258!6.39e-08!38;UBERON:0000468!1.23e-07!659;UBERON:0000466!1.44e-07!126;UBERON:0001737!1.86e-07!9;UBERON:0000477!4.31e-07!286;UBERON:0000065!5.64e-07!53;UBERON:0000481!5.97e-07!347;UBERON:0004876!7.75e-07!20|ontology_enrichment_uberon_v019=UBERON:0001737;1.15e-16;9!UBERON:0001557;1.15e-16;9!UBERON:0004211;4.41e-16;10!UBERON:0009773;4.41e-16;10!UBERON:0001231;4.41e-16;10!UBERON:0004810;4.41e-16;10!UBERON:0006555;1.01e-12;15!UBERON:0004819;1.01e-12;15!UBERON:0001285;1.01e-12;15!UBERON:0007684;1.01e-12;15!UBERON:0001851;3.70e-10;15!UBERON:0001225;5.92e-10;12!UBERON:0008987;5.92e-10;12!UBERON:0000353;6.65e-10;15!UBERON:0000072;1.52e-09;37!UBERON:0000065;2.90e-07;44!UBERON:0002113;2.99e-07;24!UBERON:0011143;2.99e-07;24|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.57e-17,9;UBERON:0004810,5.49e-16,10;UBERON:0004211,1.36e-12,15;UBERON:0009773,1.36e-12,15;UBERON:0001231,1.36e-12,15;UBERON:0001285,1.36e-12,15;UBERON:0007684,1.36e-12,15;UBERON:0004208,1.36e-12,15;UBERON:0006555,1.10e-11,16;UBERON:0004819,1.10e-11,16;UBERON:0008947,1.33e-11,38;UBERON:0003258,1.33e-11,38;UBERON:0001851,4.44e-10,15;UBERON:0001225,7.02e-10,12;UBERON:0008987,7.02e-10,12;UBERON:0000353,7.07e-10,15;UBERON:0000072,1.12e-08,47;UBERON:0001557,2.09e-07,19;UBERON:0000065,4.24e-07,54|phase1_expression=0.54503513781167,0.642301571672949,0.563817616383885,0,0.446961094427288,0,0,0,0,0.982935746006035,0.697801167972428,0.873765488520689,0.263766978228454,0.247532705920093,0.662794751455832,0,0,0,0.487932798790507,0.738726348460727,1.02000345622126,0.313454721478088,0,0.136874425072884,0.376627918784408,0,0,0,0,0.383829398097213,0,0,0.30120591877825,1.10926203050036,0,0.142169232487422,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0.224723484445085,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0.361439152384566,1.00267582127178,0.289693037921647,0,0,0.283604451492204,1.10864698731282,0.87834785693126,0.130979075497713,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0.198762407366705,0.860234595106124,0.347140501607594,0,0.419499436209906,0.275118041940067,1.04497483268405,0.516833518338658,0,0.66944122552934,0.402829317109147,0.760272105718513,0,0,0,0.267899184852239,0.22452937262617,0.112611480483322,0,0.949265659568129,0,0,0,0,0,0,1.19168262731897,0.860509862246441,1.06400514659507,0,0,0.49333509683432,0,0.269421344139376,0.490385709340376,0,0,0.468642863667593,0.624320153660641,0,0.149448680551801,0.117434498643765,0.485618833104395,0.140450806702248,0,0.61417158655884,0.103325781175765,0,0.741800787835671,0.910161361938026,0,0.336672227908132,0.125118519871964,0.277064115484183,0.438977620880838,0.612975591598039,0.600952235626387,0.113432183160021,1.4351170855109,0.640672166455702,0,1.80054657650641,0.103052529238439,2.06112432036503,0.558350568994769,1.0126579934476,0.487185025805993,0.757301322732344,0.552299391853796,0.484938170456436,0,0.10075209822764,0.508681776931463,0.193260853163297,0.545492241181669,0.860413786167011,0.243947412259191,0.265059536642971,0.580969714347592,0.207322110030741,0.252320850875628,0,0,0,0,0.464367928031979,1.44375896333917,2.24782920075703,1.51726221070292,1.44606617930089,2.42646740011267,1.96091499683166,1.89816495288877,2.83145747136345,0.98110732562673,1.15424147083917,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0.122988438543114,0,0.219500570817251,2.24803506515239,0.201057944823262,0.0925884451585296,0.325808305310325,0,0,0,0.469634776943287,0.288732895522148,0,0.1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=100268168 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000520067,NR_026683,uc011dfb.1_5end | |||
|description=CAGE_peak_1_at_LOC100268168_5end | |||
|id=chr5:172385774..172385809,- | |||
|ontology_enrichment_celltype=CL:0000066!2.48e-17!254;CL:0002321!6.17e-08!248;CL:0000220!8.77e-08!246 | |||
|ontology_enrichment_celltype_v019=CL:1000507;4.41e-16;10!CL:1000494;4.41e-16;10!CL:1000449;1.01e-12;15!CL:1000497;5.35e-11;17!CL:0002518;5.35e-11;17!CL:0002681;5.92e-10;12!CL:0002584;5.92e-10;12!CL:0000197;9.58e-07;6!CL:0000098;9.58e-07;6!CL:0002167;9.58e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,5.49e-16,10;CL:1000494,5.49e-16,10;CL:0000066,5.40e-13,253;CL:1000449,1.36e-12,15;CL:1000497,6.91e-11,17;CL:0002518,6.91e-11,17;CL:0002681,7.02e-10,12;CL:0002584,7.02e-10,12 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.02e-11;29 | |||
|ontology_enrichment_disease=DOID:305!1.20e-09!106;DOID:0050687!5.64e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.42e-08,106;DOID:0050687,7.49e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0003104!6.15e-10!238;UBERON:0009142!6.15e-10!238;UBERON:0000464!1.71e-08!104;UBERON:0000058!5.22e-08!26;UBERON:0002100!6.10e-08!216;UBERON:0008947!6.39e-08!38;UBERON:0003258!6.39e-08!38;UBERON:0000468!1.23e-07!659;UBERON:0000466!1.44e-07!126;UBERON:0001737!1.86e-07!9;UBERON:0000477!4.31e-07!286;UBERON:0000065!5.64e-07!53;UBERON:0000481!5.97e-07!347;UBERON:0004876!7.75e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.15e-16;9!UBERON:0001557;1.15e-16;9!UBERON:0004211;4.41e-16;10!UBERON:0009773;4.41e-16;10!UBERON:0001231;4.41e-16;10!UBERON:0004810;4.41e-16;10!UBERON:0006555;1.01e-12;15!UBERON:0004819;1.01e-12;15!UBERON:0001285;1.01e-12;15!UBERON:0007684;1.01e-12;15!UBERON:0001851;3.70e-10;15!UBERON:0001225;5.92e-10;12!UBERON:0008987;5.92e-10;12!UBERON:0000353;6.65e-10;15!UBERON:0000072;1.52e-09;37!UBERON:0000065;2.90e-07;44!UBERON:0002113;2.99e-07;24!UBERON:0011143;2.99e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.57e-17,9;UBERON:0004810,5.49e-16,10;UBERON:0004211,1.36e-12,15;UBERON:0009773,1.36e-12,15;UBERON:0001231,1.36e-12,15;UBERON:0001285,1.36e-12,15;UBERON:0007684,1.36e-12,15;UBERON:0004208,1.36e-12,15;UBERON:0006555,1.10e-11,16;UBERON:0004819,1.10e-11,16;UBERON:0008947,1.33e-11,38;UBERON:0003258,1.33e-11,38;UBERON:0001851,4.44e-10,15;UBERON:0001225,7.02e-10,12;UBERON:0008987,7.02e-10,12;UBERON:0000353,7.07e-10,15;UBERON:0000072,1.12e-08,47;UBERON:0001557,2.09e-07,19;UBERON:0000065,4.24e-07,54 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.563817616383885,0,0.446961094427288,0,0,0,0,0.982935746006035,0.697801167972428,0.873765488520689,0.263766978228454,0.247532705920093,0.662794751455832,0,0,0,0.487932798790507,0.738726348460727,1.02000345622126,0.313454721478088,0,0.136874425072884,0.376627918784408,0,0,0,0,0.383829398097213,0,0,0.30120591877825,1.10926203050036,0,0.142169232487422,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0.224723484445085,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0.361439152384566,1.00267582127178,0.289693037921647,0,0,0.283604451492204,1.10864698731282,0.87834785693126,0.130979075497713,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0.198762407366705,0.860234595106124,0.347140501607594,0,0.419499436209906,0.275118041940067,1.04497483268405,0.516833518338658,0,0.66944122552934,0.402829317109147,0.760272105718513,0,0,0,0.267899184852239,0.22452937262617,0.112611480483322,0,0.949265659568129,0,0,0,0,0,0,1.19168262731897,0.860509862246441,1.06400514659507,0,0,0.49333509683432,0,0.269421344139376,0.490385709340376,0,0,0.468642863667593,0.624320153660641,0,0.149448680551801,0.117434498643765,0.485618833104395,0.140450806702248,0,0.61417158655884,0.103325781175765,0,0.741800787835671,0.910161361938026,0,0.336672227908132,0.125118519871964,0.277064115484183,0.438977620880838,0.612975591598039,0.600952235626387,0.113432183160021,1.4351170855109,0.640672166455702,0,1.80054657650641,0.103052529238439,2.06112432036503,0.558350568994769,1.0126579934476,0.487185025805993,0.757301322732344,0.552299391853796,0.484938170456436,0,0.10075209822764,0.508681776931463,0.193260853163297,0.545492241181669,0.860413786167011,0.243947412259191,0.265059536642971,0.580969714347592,0.207322110030741,0.252320850875628,0,0,0,0,0.464367928031979,1.44375896333917,2.24782920075703,1.51726221070292,1.44606617930089,2.42646740011267,1.96091499683166,1.89816495288877,2.83145747136345,0.98110732562673,1.15424147083917,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0.122988438543114,0,0.219500570817251,2.24803506515239,0.201057944823262,0.0925884451585296,0.325808305310325,0,0,0,0.469634776943287,0.288732895522148,0,0.190254152234598,0,0,0,0.234004265139238,0,0,0.335964256397719,0.283550194484773,0.358234090811393,0,0.383382679165211,0,0.088048434013226,0.414656231081544,0,0,0.126995788584338,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,3.57656445851882,0,0,1.04007436911366,1.02882949704857,0,0.266422179016099,0.714889968290738,0,0,0,0,0,0.602878754119172,0,0.699810938274399,0,0,0,0.239624855491583,0,0,0.434343920002738,0.61642896765115,0.358121926479791,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0.500170521059677,0,1.03985430765404,0.535286966391485,2.36553622550902,1.05427273493442,0.300946099727719,0,0,0,0.368738337083406,0.173767228936166,0,1.02943027143257,0,0,0.106727557803444,0,0,0,0.248107807818777,1.2276957863045,0.280660094433074,0.896974044789907,0,0,0,0,0,0.246381468041427,0,0.232420756919918,0.362578348774867,0,0.460404944679482,0.229628896329213,0.182091168006717,0.131124414959424,3.15839729035188,1.30926073077505,6.27479815341484,0,1.16106791782163,1.13733384070897,0,0.215915916102139,0,2.16757150035082,2.50844886927427,0.254876273045038,3.3243040357149,2.23874754722178,0,0,0.512900250232778,0.984043937099117,1.30151357865721,0.309123034943167,1.28197250745681,0.907604499126468,0,0,1.6068392984416,0.290012154876366,0.154048617114644,0.15350367472613,0.827019434907183,0.429680979473094,0.290033387828457,0.426133137080504,0.267096106940212,0.165284915360978,0.192190067365106,0.765676274967505,0.4046311234222,0,0,0.6970372701606,0.308033580176089,1.06461206063404,0,0.18532421910392,0.572499546967965,0,1.2655176988749,0.571890581771475,0.255897791311334,0.42793898803392,0.318203247925937,0.78494864019923,0.359744915166629,0.274537029736055,0.235624804691373,0,0,0.421258456238981,0,0,1.05650146756755,0,0,0,0.551365343546124,1.32687795048244,0,1.73632660280006,0.655894752046633,0.405820753925408,0,0,0.430234056612155,0.196498082026242,0,0,0.422215270595328,0.987884678879706,0,0.349934720244983,0,0.670302275535787,0,0.0941438007767792,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0.427296284509893,0.962479855263359,0.490080431962063,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0.334330152832435,1.98895302764489,0.23874448473769,0.296964680832639,0.614321404198464,0,0,0.667852230137435,0,0.844501632511974,0.597743964753209,0,0.251932747854276,0,0,0.933118762985422,0.359473404589307,0.537063524026827,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0.520855522170466,0,0,0.227586896570999,0.254253650292766,0.236387681767936,0.344743373241465,0,0,0,0.120596438625408,0,0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| |||
|short_description=p1@LOC100268168 | |||
}} |
Revision as of 14:54, 13 September 2013
Short description: | p1@LOC100268168 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LOC100268168_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000520067, NR_026683, uc011dfb.1_5end |
EntrezGene: | LOC100268168 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 5.49e-16 | 10 |
nephron tubule epithelial cell | 5.49e-16 | 10 |
epithelial cell | 5.40e-13 | 253 |
epithelial cell of nephron | 1.36e-12 | 15 |
kidney cell | 6.91e-11 | 17 |
kidney epithelial cell | 6.91e-11 | 17 |
kidney cortical cell | 7.02e-10 | 12 |
renal cortical epithelial cell | 7.02e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.57e-17 | 9 |
nephron tubule epithelium | 5.49e-16 | 10 |
nephron epithelium | 1.36e-12 | 15 |
renal tubule | 1.36e-12 | 15 |
nephron tubule | 1.36e-12 | 15 |
nephron | 1.36e-12 | 15 |
uriniferous tubule | 1.36e-12 | 15 |
nephrogenic mesenchyme | 1.36e-12 | 15 |
excretory tube | 1.10e-11 | 16 |
kidney epithelium | 1.10e-11 | 16 |
respiratory primordium | 1.33e-11 | 38 |
endoderm of foregut | 1.33e-11 | 38 |
cortex | 4.44e-10 | 15 |
cortex of kidney | 7.02e-10 | 12 |
renal parenchyma | 7.02e-10 | 12 |
parenchyma | 7.07e-10 | 15 |
segment of respiratory tract | 1.12e-08 | 47 |
upper respiratory tract | 2.09e-07 | 19 |
respiratory tract | 4.24e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.42e-08 | 106 |
cell type cancer | 7.49e-07 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.