FFCP PHASE1:Hg19::chr5:311378..311392,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:311378..311392,+|id=chr5:311378..311392,+|ontology_enrichment_celltype=CL:0002139!1.20e-16!24;CL:0000071!4.31e-11!18;CL:0002546!4.31e-11!18;CL:0000115!1.98e-10!35;CL:0002582!8.40e-10!3;CL:0002334!7.98e-08!12;CL:0002078!1.09e-07!44;CL:0002543!1.72e-07!6;CL:0005020!2.01e-07!6;CL:0002138!2.01e-07!6;CL:0005022!2.01e-07!6;CL:0002545!9.36e-07!2|ontology_enrichment_celltype_v019=CL:0002582;1.00e-22;3!CL:0002566;5.26e-18;1!CL:0000148;1.39e-15;10!CL:0002543;4.30e-12;6!CL:0000147;2.58e-11;14!CL:0000710;4.30e-08;20!CL:0002139;8.17e-07;24|ontology_enrichment_celltype_v019_2=CL:0002582,8.99e-23,3;CL:0002566,5.26e-18,1;CL:0000148,1.29e-15,10;CL:0000541,1.29e-15,10;CL:0002543,4.30e-12,6;CL:0000147,2.45e-11,14;CL:0000710,4.15e-08,20;CL:0002139,8.26e-07,24|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1909!4.71e-07!2|ontology_enrichment_disease_v019=DOID:3347;2.66e-18;1!DOID:1909;8.69e-10;2|ontology_enrichment_disease_v019_2=DOID:3347,2.66e-18,1;DOID:1909,8.69e-10,2|ontology_enrichment_uberon=UBERON:0001986!4.31e-11!18;UBERON:0004638!4.31e-11!18;UBERON:0004852!4.31e-11!18;UBERON:0000487!8.89e-11!22;UBERON:0006914!3.14e-09!25;UBERON:0005800!9.36e-07!2;UBERON:0001515!9.36e-07!2|ontology_enrichment_uberon_v019=UBERON:0001638;2.29e-08;9!UBERON:0003920;2.29e-08;9!UBERON:0004582;2.29e-08;9|ontology_enrichment_uberon_v019_2=UBERON:0001638,2.29e-08,9;UBERON:0003920,2.29e-08,9;UBERON:0004582,2.29e-08,9|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.825354125820202,0,1.29208379584664,0.35576626268671,0,0,0.760272105718513,0,0.367663080345869,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,2.84779697870439,2.01521918323448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03193261734941,0.381988425558278,0,0,3.39330725920968,0,1.42913216315289,0,0,0,0,0,0.845302752556,0,0,0,1.41849132023278,0.266422179016099,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0.355123450626254,1.23190734020714,1.55776328755086,0.697262270759755,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0.680374821106063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,1.09633539717401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.70112264379108,0.570930667089935,0.470531639396343,0,0,0,0,0,0,0,0.889811221596536,0.228840068396924,0,0.15543720058278,0,0.159296767163702,0,0.155262956876259,0,0.53168342911599,0,0,0,0,0.545545977607678,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,6.90359926060101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0.444925607568277,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0.591660003652827,0.511280428554946,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628776414746108,0,0,0,0,0,0|short_description=p@chr5:311378..311392,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:311378..311392,+ | |||
|id=chr5:311378..311392,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.20e-16!24;CL:0000071!4.31e-11!18;CL:0002546!4.31e-11!18;CL:0000115!1.98e-10!35;CL:0002582!8.40e-10!3;CL:0002334!7.98e-08!12;CL:0002078!1.09e-07!44;CL:0002543!1.72e-07!6;CL:0005020!2.01e-07!6;CL:0002138!2.01e-07!6;CL:0005022!2.01e-07!6;CL:0002545!9.36e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002582;1.00e-22;3!CL:0002566;5.26e-18;1!CL:0000148;1.39e-15;10!CL:0002543;4.30e-12;6!CL:0000147;2.58e-11;14!CL:0000710;4.30e-08;20!CL:0002139;8.17e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002582,8.99e-23,3;CL:0002566,5.26e-18,1;CL:0000148,1.29e-15,10;CL:0000541,1.29e-15,10;CL:0002543,4.30e-12,6;CL:0000147,2.45e-11,14;CL:0000710,4.15e-08,20;CL:0002139,8.26e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!4.71e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3347;2.66e-18;1!DOID:1909;8.69e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,2.66e-18,1;DOID:1909,8.69e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001986!4.31e-11!18;UBERON:0004638!4.31e-11!18;UBERON:0004852!4.31e-11!18;UBERON:0000487!8.89e-11!22;UBERON:0006914!3.14e-09!25;UBERON:0005800!9.36e-07!2;UBERON:0001515!9.36e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001638;2.29e-08;9!UBERON:0003920;2.29e-08;9!UBERON:0004582;2.29e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001638,2.29e-08,9;UBERON:0003920,2.29e-08,9;UBERON:0004582,2.29e-08,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.825354125820202,0,1.29208379584664,0.35576626268671,0,0,0.760272105718513,0,0.367663080345869,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,2.84779697870439,2.01521918323448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03193261734941,0.381988425558278,0,0,3.39330725920968,0,1.42913216315289,0,0,0,0,0,0.845302752556,0,0,0,1.41849132023278,0.266422179016099,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0.355123450626254,1.23190734020714,1.55776328755086,0.697262270759755,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0.680374821106063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,1.09633539717401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.70112264379108,0.570930667089935,0.470531639396343,0,0,0,0,0,0,0,0.889811221596536,0.228840068396924,0,0.15543720058278,0,0.159296767163702,0,0.155262956876259,0,0.53168342911599,0,0,0,0,0.545545977607678,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,6.90359926060101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0.444925607568277,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0.591660003652827,0.511280428554946,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628776414746108,0,0,0,0,0,0 | |||
|short_description=p@chr5:311378..311392,+ | |||
}} |
Revision as of 15:23, 13 September 2013
Short description: | p@chr5:311378..311392, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:311378..311392, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
visceral preadipocyte | 8.99e-23 | 3 |
dark melanocyte | 5.26e-18 | 1 |
melanocyte | 1.29e-15 | 10 |
melanoblast | 1.29e-15 | 10 |
vein endothelial cell | 4.30e-12 | 6 |
pigment cell | 2.45e-11 | 14 |
neurecto-epithelial cell | 4.15e-08 | 20 |
endothelial cell of vascular tree | 8.26e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
vein | 2.29e-08 | 9 |
venous blood vessel | 2.29e-08 | 9 |
venous system | 2.29e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 2.66e-18 | 1 |
melanoma | 8.69e-10 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.