Personal tools

FFCP PHASE1:Mm9::chr18:84268738..84268777,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1518|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:84268738..84268777,-|id=chr18:84268738..84268777,-|ontology_enrichment_celltype=CL:0002612!1.70e-09!3;CL:0002611!8.05e-07!2|ontology_enrichment_celltype_v019_2=CL:0002612,1.10e-52,3;CL:0002611,2.13e-35,2;CL:0000117,1.61e-19,23;CL:0000337,1.61e-19,23;CL:0000540,8.03e-14,33;CL:0000047,8.03e-14,33;CL:0000031,8.03e-14,33;CL:0000404,8.03e-14,33;CL:0000393,8.52e-12,39;CL:0000211,8.52e-12,39;CL:0002319,9.33e-11,43;CL:0000221,1.59e-10,44;CL:0000133,1.59e-10,44;CL:0002321,8.13e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002240!4.84e-17!6;UBERON:0005174!4.84e-17!6;UBERON:0001137!4.84e-17!6;UBERON:0001948!1.08e-14!5;UBERON:0002315!1.08e-14!5;UBERON:0003076!1.39e-10!12;UBERON:0003057!1.39e-10!12;UBERON:0002257!1.70e-09!3;UBERON:0002256!8.05e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0001948,1.40e-86,5;UBERON:0002315,1.40e-86,5;UBERON:0002240,2.48e-72,6;UBERON:0005174,2.48e-72,6;UBERON:0001137,2.48e-72,6;UBERON:0002257,1.10e-52,3;UBERON:0003076,1.18e-36,12;UBERON:0003057,1.18e-36,12;UBERON:0002256,2.13e-35,2;UBERON:0000489,2.63e-21,21;UBERON:0002020,1.96e-13,34;UBERON:0003103,9.33e-11,43;UBERON:0001049,5.37e-09,52;UBERON:0005068,5.37e-09,52;UBERON:0006241,5.37e-09,52;UBERON:0007135,5.37e-09,52;UBERON:0000073,1.10e-08,54;UBERON:0002346,2.08e-07,64;UBERON:0003075,2.08e-07,64;UBERON:0007284,2.08e-07,64|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85606673486466,7.50953039235486,0,0,0,0,0,0,0,0,0,0,0,0,9.72274332063103,12.6710795911202,2.98239113320481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0.64183841918363,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.256100609619477,0.114870937911227,0,0.231768651889711,0.192909220463705,0.412085900803307,0.294397840268795,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0.499621155875892,0,0,0,0.441182838239031,0.463735671240843|short_description=p@chr18:84268738..84268777,-}}
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=1518
|UniProt=NA
|association_with_transcript=NA
|description=CAGE_peak_at_chr18:84268738..84268777,-
|id=chr18:84268738..84268777,-
|ontology_enrichment_celltype=CL:0002612!1.70e-09!3;CL:0002611!8.05e-07!2
|ontology_enrichment_celltype_v019_2=CL:0002612,1.10e-52,3;CL:0002611,2.13e-35,2;CL:0000117,1.61e-19,23;CL:0000337,1.61e-19,23;CL:0000540,8.03e-14,33;CL:0000047,8.03e-14,33;CL:0000031,8.03e-14,33;CL:0000404,8.03e-14,33;CL:0000393,8.52e-12,39;CL:0000211,8.52e-12,39;CL:0002319,9.33e-11,43;CL:0000221,1.59e-10,44;CL:0000133,1.59e-10,44;CL:0002321,8.13e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002240!4.84e-17!6;UBERON:0005174!4.84e-17!6;UBERON:0001137!4.84e-17!6;UBERON:0001948!1.08e-14!5;UBERON:0002315!1.08e-14!5;UBERON:0003076!1.39e-10!12;UBERON:0003057!1.39e-10!12;UBERON:0002257!1.70e-09!3;UBERON:0002256!8.05e-07!2
|ontology_enrichment_uberon_v019_2=UBERON:0001948,1.40e-86,5;UBERON:0002315,1.40e-86,5;UBERON:0002240,2.48e-72,6;UBERON:0005174,2.48e-72,6;UBERON:0001137,2.48e-72,6;UBERON:0002257,1.10e-52,3;UBERON:0003076,1.18e-36,12;UBERON:0003057,1.18e-36,12;UBERON:0002256,2.13e-35,2;UBERON:0000489,2.63e-21,21;UBERON:0002020,1.96e-13,34;UBERON:0003103,9.33e-11,43;UBERON:0001049,5.37e-09,52;UBERON:0005068,5.37e-09,52;UBERON:0006241,5.37e-09,52;UBERON:0007135,5.37e-09,52;UBERON:0000073,1.10e-08,54;UBERON:0002346,2.08e-07,64;UBERON:0003075,2.08e-07,64;UBERON:0007284,2.08e-07,64
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85606673486466,7.50953039235486,0,0,0,0,0,0,0,0,0,0,0,0,9.72274332063103,12.6710795911202,2.98239113320481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0.64183841918363,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.256100609619477,0.114870937911227,0,0.231768651889711,0.192909220463705,0.412085900803307,0.294397840268795,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0.499621155875892,0,0,0,0.441182838239031,0.463735671240843
|short_description=p@chr18:84268738..84268777,-
}}

Revision as of 16:54, 13 September 2013

Short description:p@chr18:84268738..84268777, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr18:84268738..84268777, -
Coexpression cluster:MCL_coexpression_mm9:1518
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression



0.0
2.5
5.0
7.5
10.0
12.5
15.0




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr18:84268738..84268777,-&oldid=2954787"