FFCP PHASE1:Hg19::chr6:150954152..150954194,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1215|description=CAGE_peak_at_chr6:150954152..150954194,+|id=chr6:150954152..150954194,+|ontology_enrichment_celltype=CL:0000542!1.70e-55!53;CL:0000051!1.70e-55!53;CL:0000838!9.24e-54!52;CL:0000738!9.41e-38!140;CL:0002087!2.25e-35!119;CL:0000945!4.11e-31!24;CL:0000826!4.11e-31!24;CL:0002031!4.82e-30!124;CL:0000988!7.58e-30!182;CL:0000037!1.70e-28!172;CL:0000566!1.70e-28!172;CL:0002032!1.52e-25!165;CL:0000837!1.52e-25!165;CL:0000791!2.11e-22!18;CL:0000789!2.11e-22!18;CL:0002420!2.11e-22!18;CL:0002419!2.11e-22!18;CL:0000790!2.11e-22!18;CL:0000084!6.13e-22!25;CL:0000827!6.13e-22!25;CL:0000236!8.44e-21!14;CL:0000625!2.00e-18!11;CL:0000080!5.11e-12!6;CL:0000451!8.88e-08!10;CL:0000624!2.07e-07!6;CL:0000990!2.69e-07!8;CL:0000453!5.66e-07!5|ontology_enrichment_celltype_v019=CL:0000945;3.48e-53;24!CL:0000236;1.16e-45;13!CL:0000542;1.54e-29;53!CL:0002087;1.63e-09;104!CL:0000453;1.91e-08;5|ontology_enrichment_celltype_v019_2=CL:0000945,3.34e-53,24;CL:0000826,3.34e-53,24;CL:0000542,2.22e-46,53;CL:0000051,2.22e-46,53;CL:0000838,1.18e-43,52;CL:0000236,3.35e-42,14;CL:0000738,1.32e-21,136;CL:0002087,5.60e-21,115;CL:0000988,5.11e-19,177;CL:0002031,1.01e-16,120;CL:0000037,4.06e-16,168;CL:0002032,7.58e-16,161;CL:0000837,7.58e-16,161;CL:0000453,1.89e-08,5|ontology_enrichment_development_v019=CL:0000051;1.54e-29;53!UBERON:0004872;1.95e-09;7|ontology_enrichment_disease=DOID:0060058!3.32e-09!10|ontology_enrichment_disease_v019=DOID:0060058;3.70e-10;10|ontology_enrichment_disease_v019_2=DOID:0060058,2.89e-10,10|ontology_enrichment_uberon=UBERON:0000178!8.53e-14!15;UBERON:0000179!8.53e-14!15;UBERON:0000463!8.53e-14!15;UBERON:0004177!7.79e-10!7;UBERON:0002193!1.68e-07!112;UBERON:0002390!2.29e-07!102;UBERON:0003061!2.29e-07!102;UBERON:0002106!6.04e-07!3;UBERON:0004854!6.04e-07!3;UBERON:0009034!6.04e-07!3;UBERON:0002095!6.04e-07!3;UBERON:0004782!6.04e-07!3;UBERON:0003281!6.04e-07!3;UBERON:0009664!6.04e-07!3;UBERON:0002296!6.04e-07!3;UBERON:0005602!6.04e-07!3;UBERON:0001179!6.04e-07!3;UBERON:0006293!6.04e-07!3|ontology_enrichment_uberon_v019=UBERON:0004177;6.66e-13;5!UBERON:0005057;6.66e-13;5!UBERON:0002106;1.15e-12;3!UBERON:0002390;1.61e-09;32!UBERON:0000178;3.55e-09;15!UBERON:0000179;3.55e-09;15!UBERON:0000463;3.55e-09;15|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.20e-12,3;UBERON:0004854,1.20e-12,3;UBERON:0009034,1.20e-12,3;UBERON:0002095,1.20e-12,3;UBERON:0004782,1.20e-12,3;UBERON:0003281,1.20e-12,3;UBERON:0009664,1.20e-12,3;UBERON:0002296,1.20e-12,3;UBERON:0005602,1.20e-12,3;UBERON:0001179,1.20e-12,3;UBERON:0006293,1.20e-12,3;UBERON:0004177,2.88e-09,7;UBERON:0005057,2.88e-09,7;UBERON:0000178,4.04e-09,15;UBERON:0000179,4.04e-09,15;UBERON:0000463,4.04e-09,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90370941842215,2.70931945184821,2.51874500203774,0.393364276848904,0,0.154816123316076,0,0,0,0.697204805222715,2.98555388223585,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0.645484683583826,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0.398927315243264,0,0,0,0,0,0,0,0.605399502633369,2.57794345191295,0.632924774881769,0,0,0,0,0,0,0,0,0,17.5996244461323,14.7457425040775,15.1216573156804,9.38806489646316,9.20910770182829,20.6910878383614,12.5598525829124,20.0351288452426,13.0918982895173,14.0936925449025,6.88091810625412,0,0,0,0,0.393010762749165,0.616804496998528,0,0.32592226663359,0,1.94826728407911,0.334231370655521,1.47302953737419,1.77227115666897,3.24964636518019,0.25618263945135,1.04047478047903,0.164437904603676,0,0,0,0,0,0,0.383220493601921,2.74901956386104,1.01207876807801,0.95569624297229,2.60433381542567,1.90090408889675,0.301150238155546,0.255973222308837,1.24930726552346,1.89421801635213,0.821127996921047,0.201606743224732,0.267440195783507,0.724122019413995,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.522389211897802,0.132957960518865,0,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.862510299438069,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.647142602455851,1.06727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,1.66762242820452,1.23408681925858,0.648473311192717,0,0.79312517629427,0,0,0,2.04383492638291,0,0.497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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1215 | |||
|description=CAGE_peak_at_chr6:150954152..150954194,+ | |||
|id=chr6:150954152..150954194,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.70e-55!53;CL:0000051!1.70e-55!53;CL:0000838!9.24e-54!52;CL:0000738!9.41e-38!140;CL:0002087!2.25e-35!119;CL:0000945!4.11e-31!24;CL:0000826!4.11e-31!24;CL:0002031!4.82e-30!124;CL:0000988!7.58e-30!182;CL:0000037!1.70e-28!172;CL:0000566!1.70e-28!172;CL:0002032!1.52e-25!165;CL:0000837!1.52e-25!165;CL:0000791!2.11e-22!18;CL:0000789!2.11e-22!18;CL:0002420!2.11e-22!18;CL:0002419!2.11e-22!18;CL:0000790!2.11e-22!18;CL:0000084!6.13e-22!25;CL:0000827!6.13e-22!25;CL:0000236!8.44e-21!14;CL:0000625!2.00e-18!11;CL:0000080!5.11e-12!6;CL:0000451!8.88e-08!10;CL:0000624!2.07e-07!6;CL:0000990!2.69e-07!8;CL:0000453!5.66e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.48e-53;24!CL:0000236;1.16e-45;13!CL:0000542;1.54e-29;53!CL:0002087;1.63e-09;104!CL:0000453;1.91e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.34e-53,24;CL:0000826,3.34e-53,24;CL:0000542,2.22e-46,53;CL:0000051,2.22e-46,53;CL:0000838,1.18e-43,52;CL:0000236,3.35e-42,14;CL:0000738,1.32e-21,136;CL:0002087,5.60e-21,115;CL:0000988,5.11e-19,177;CL:0002031,1.01e-16,120;CL:0000037,4.06e-16,168;CL:0002032,7.58e-16,161;CL:0000837,7.58e-16,161;CL:0000453,1.89e-08,5 | |||
|ontology_enrichment_development_v019=CL:0000051;1.54e-29;53!UBERON:0004872;1.95e-09;7 | |||
|ontology_enrichment_disease=DOID:0060058!3.32e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.70e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.89e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!8.53e-14!15;UBERON:0000179!8.53e-14!15;UBERON:0000463!8.53e-14!15;UBERON:0004177!7.79e-10!7;UBERON:0002193!1.68e-07!112;UBERON:0002390!2.29e-07!102;UBERON:0003061!2.29e-07!102;UBERON:0002106!6.04e-07!3;UBERON:0004854!6.04e-07!3;UBERON:0009034!6.04e-07!3;UBERON:0002095!6.04e-07!3;UBERON:0004782!6.04e-07!3;UBERON:0003281!6.04e-07!3;UBERON:0009664!6.04e-07!3;UBERON:0002296!6.04e-07!3;UBERON:0005602!6.04e-07!3;UBERON:0001179!6.04e-07!3;UBERON:0006293!6.04e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004177;6.66e-13;5!UBERON:0005057;6.66e-13;5!UBERON:0002106;1.15e-12;3!UBERON:0002390;1.61e-09;32!UBERON:0000178;3.55e-09;15!UBERON:0000179;3.55e-09;15!UBERON:0000463;3.55e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.20e-12,3;UBERON:0004854,1.20e-12,3;UBERON:0009034,1.20e-12,3;UBERON:0002095,1.20e-12,3;UBERON:0004782,1.20e-12,3;UBERON:0003281,1.20e-12,3;UBERON:0009664,1.20e-12,3;UBERON:0002296,1.20e-12,3;UBERON:0005602,1.20e-12,3;UBERON:0001179,1.20e-12,3;UBERON:0006293,1.20e-12,3;UBERON:0004177,2.88e-09,7;UBERON:0005057,2.88e-09,7;UBERON:0000178,4.04e-09,15;UBERON:0000179,4.04e-09,15;UBERON:0000463,4.04e-09,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90370941842215,2.70931945184821,2.51874500203774,0.393364276848904,0,0.154816123316076,0,0,0,0.697204805222715,2.98555388223585,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0.645484683583826,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0.398927315243264,0,0,0,0,0,0,0,0.605399502633369,2.57794345191295,0.632924774881769,0,0,0,0,0,0,0,0,0,17.5996244461323,14.7457425040775,15.1216573156804,9.38806489646316,9.20910770182829,20.6910878383614,12.5598525829124,20.0351288452426,13.0918982895173,14.0936925449025,6.88091810625412,0,0,0,0,0.393010762749165,0.616804496998528,0,0.32592226663359,0,1.94826728407911,0.334231370655521,1.47302953737419,1.77227115666897,3.24964636518019,0.25618263945135,1.04047478047903,0.164437904603676,0,0,0,0,0,0,0.383220493601921,2.74901956386104,1.01207876807801,0.95569624297229,2.60433381542567,1.90090408889675,0.301150238155546,0.255973222308837,1.24930726552346,1.89421801635213,0.821127996921047,0.201606743224732,0.267440195783507,0.724122019413995,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.522389211897802,0.132957960518865,0,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.862510299438069,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.647142602455851,1.06727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,1.66762242820452,1.23408681925858,0.648473311192717,0,0.79312517629427,0,0,0,2.04383492638291,0,0.497992903438899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,4.97311047956066,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,21.3495212650048,5.56037725259263,4.28129992972367,0,0,0,3.28418620588199,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57732412567589,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0.2249738915515,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0.414239055347196,1.48849806543585,0,29.7173940049386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.9271484132237,11.2935114266359,14.5573200887701,0,0,0,1.9998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,2.91350145737546,1.09578409555081,4.29746970477194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,1.87307838524418,0.993195428733726,0,0,0.202117188958219,0,0,3.97377112786066,0.358611026963382,0,0,0,0,0,0,0,0,0,3.22038069745642,2.24397944612263 | |||
|short_description=p@chr6:150954152..150954194,+ | |||
}} |
Revision as of 18:44, 13 September 2013
Short description: | p@chr6:150954152..150954194, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:150954152..150954194, + |
Coexpression cluster: | C1215_migratory_CD19_adult_immature_Dendritic_Burkitt_vein |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.34e-53 | 24 |
pro-B cell | 3.34e-53 | 24 |
lymphocyte | 2.22e-46 | 53 |
common lymphoid progenitor | 2.22e-46 | 53 |
lymphoid lineage restricted progenitor cell | 1.18e-43 | 52 |
B cell | 3.35e-42 | 14 |
leukocyte | 1.32e-21 | 136 |
nongranular leukocyte | 5.60e-21 | 115 |
hematopoietic cell | 5.11e-19 | 177 |
hematopoietic lineage restricted progenitor cell | 1.01e-16 | 120 |
hematopoietic stem cell | 4.06e-16 | 168 |
hematopoietic oligopotent progenitor cell | 7.58e-16 | 161 |
hematopoietic multipotent progenitor cell | 7.58e-16 | 161 |
Langerhans cell | 1.89e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.20e-12 | 3 |
gastrointestinal system mesentery | 1.20e-12 | 3 |
stomach region | 1.20e-12 | 3 |
mesentery | 1.20e-12 | 3 |
gastrointestinal system serosa | 1.20e-12 | 3 |
mesentery of stomach | 1.20e-12 | 3 |
gut mesentery | 1.20e-12 | 3 |
dorsal mesentery | 1.20e-12 | 3 |
dorsal mesogastrium | 1.20e-12 | 3 |
peritoneal cavity | 1.20e-12 | 3 |
spleen primordium | 1.20e-12 | 3 |
hemopoietic organ | 2.88e-09 | 7 |
immune organ | 2.88e-09 | 7 |
blood | 4.04e-09 | 15 |
haemolymphatic fluid | 4.04e-09 | 15 |
organism substance | 4.04e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.89e-10 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.