FFCP PHASE1:Hg19::chr6:170089405..170089420,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:170089405..170089420,-|id=chr6:170089405..170089420,-|ontology_enrichment_celltype=CL:0002092!3.00e-07!10;CL:0000062!5.07e-07!11;CL:0000375!5.07e-07!11;CL:0000335!5.07e-07!11|ontology_enrichment_celltype_v019=CL:0000062;8.06e-23;9!CL:0000322;8.31e-09;3!CL:0000135;1.40e-08;3!CL:0000388;1.40e-08;3!CL:0002563;9.63e-07;4|ontology_enrichment_celltype_v019_2=CL:0000062,8.15e-19,11;CL:0000375,8.15e-19,11;CL:0000335,8.15e-19,11;CL:0000322,8.31e-09,3;CL:0000135,1.30e-08,3;CL:0000388,1.30e-08,3;CL:0002563,9.63e-07,4|ontology_enrichment_development_v019=CL:0000335;8.15e-19;11|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3910;1.48e-12;2|ontology_enrichment_disease_v019_2=DOID:3910,1.48e-12,2|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0004903;1.48e-12;2!UBERON:0002173;1.48e-12;2!UBERON:0002186;1.48e-12;2!UBERON:0004821;8.31e-09;3!UBERON:0007499;8.31e-09;3!UBERON:0003215;8.31e-09;3!UBERON:0010368;8.31e-09;3!UBERON:0009911;8.31e-09;3!UBERON:0002299;8.31e-09;3!UBERON:0006524;8.31e-09;3!UBERON:0008874;8.31e-09;3!UBERON:0002169;8.31e-09;3!UBERON:0004894;8.31e-09;3!UBERON:0007846;1.40e-08;3!UBERON:0000043;1.40e-08;3!UBERON:0007845;1.40e-08;3!UBERON:0009856;6.50e-07;4!UBERON:0001242;9.63e-07;4!UBERON:0001262;9.63e-07;4!UBERON:0004786;9.63e-07;4!UBERON:0004808;9.63e-07;4!UBERON:0001277;9.63e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.48e-12,2;UBERON:0002173,1.48e-12,2;UBERON:0002186,1.48e-12,2;UBERON:0004821,8.31e-09,3;UBERON:0003215,8.31e-09,3;UBERON:0010368,8.31e-09,3;UBERON:0009911,8.31e-09,3;UBERON:0002299,8.31e-09,3;UBERON:0006524,8.31e-09,3;UBERON:0008874,8.31e-09,3;UBERON:0002169,8.31e-09,3;UBERON:0004894,8.31e-09,3;UBERON:0007846,1.30e-08,3;UBERON:0000043,1.30e-08,3;UBERON:0007845,1.30e-08,3;UBERON:0001242,9.63e-07,4;UBERON:0001262,9.63e-07,4;UBERON:0004786,9.63e-07,4;UBERON:0004808,9.63e-07,4;UBERON:0001277,9.63e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0.150238058906597,0,0,0.213557388818567,0,0,0,0.257640540045629,0,0.168776332241266,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,2.27407504055985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,3.57120912791539,5.77566499444116,0,0,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12923118845163,0,0.614481528616916,1.11838053946208,0,0,0,0,0,0,0,0,0,0,0.222886768554957,7.95581211057957,0,0,0,0,0,0.111308705022906,0.16480387422676,0.211125408127993,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0.137041924646751,0.397429223405979,0,0,0,0,0.39961921916426,0,0,0,0,0,0,0,0,0.611989305817931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0.889811221596536,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2249819094128,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0.397832444232549,0,2.62216589314576,0,0,0,0,0,0.781078098613847,0,0,0,0,0,0.175871244359621,0.127762427639595,0,0,0,0,0,0,0.171488009437418,0,0.0657727735628491,0.118193840883968,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0.6828739083758,0.691259661814092,0,0,0,0,0,0,0.955538938977433,0,0.098150233615243,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48798007266701,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0.332660356546013,0.0814032686109745,0,0,0,0,0,0,0,0,0|short_description=p@chr6:170089405..170089420,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:170089405..170089420,- | |||
|id=chr6:170089405..170089420,- | |||
|ontology_enrichment_celltype=CL:0002092!3.00e-07!10;CL:0000062!5.07e-07!11;CL:0000375!5.07e-07!11;CL:0000335!5.07e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000062;8.06e-23;9!CL:0000322;8.31e-09;3!CL:0000135;1.40e-08;3!CL:0000388;1.40e-08;3!CL:0002563;9.63e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,8.15e-19,11;CL:0000375,8.15e-19,11;CL:0000335,8.15e-19,11;CL:0000322,8.31e-09,3;CL:0000135,1.30e-08,3;CL:0000388,1.30e-08,3;CL:0002563,9.63e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000335;8.15e-19;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;1.48e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,1.48e-12,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.48e-12;2!UBERON:0002173;1.48e-12;2!UBERON:0002186;1.48e-12;2!UBERON:0004821;8.31e-09;3!UBERON:0007499;8.31e-09;3!UBERON:0003215;8.31e-09;3!UBERON:0010368;8.31e-09;3!UBERON:0009911;8.31e-09;3!UBERON:0002299;8.31e-09;3!UBERON:0006524;8.31e-09;3!UBERON:0008874;8.31e-09;3!UBERON:0002169;8.31e-09;3!UBERON:0004894;8.31e-09;3!UBERON:0007846;1.40e-08;3!UBERON:0000043;1.40e-08;3!UBERON:0007845;1.40e-08;3!UBERON:0009856;6.50e-07;4!UBERON:0001242;9.63e-07;4!UBERON:0001262;9.63e-07;4!UBERON:0004786;9.63e-07;4!UBERON:0004808;9.63e-07;4!UBERON:0001277;9.63e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.48e-12,2;UBERON:0002173,1.48e-12,2;UBERON:0002186,1.48e-12,2;UBERON:0004821,8.31e-09,3;UBERON:0003215,8.31e-09,3;UBERON:0010368,8.31e-09,3;UBERON:0009911,8.31e-09,3;UBERON:0002299,8.31e-09,3;UBERON:0006524,8.31e-09,3;UBERON:0008874,8.31e-09,3;UBERON:0002169,8.31e-09,3;UBERON:0004894,8.31e-09,3;UBERON:0007846,1.30e-08,3;UBERON:0000043,1.30e-08,3;UBERON:0007845,1.30e-08,3;UBERON:0001242,9.63e-07,4;UBERON:0001262,9.63e-07,4;UBERON:0004786,9.63e-07,4;UBERON:0004808,9.63e-07,4;UBERON:0001277,9.63e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612975591598039,0.150238058906597,0,0,0.213557388818567,0,0,0,0.257640540045629,0,0.168776332241266,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,2.27407504055985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,3.57120912791539,5.77566499444116,0,0,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12923118845163,0,0.614481528616916,1.11838053946208,0,0,0,0,0,0,0,0,0,0,0.222886768554957,7.95581211057957,0,0,0,0,0,0.111308705022906,0.16480387422676,0.211125408127993,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0.137041924646751,0.397429223405979,0,0,0,0,0.39961921916426,0,0,0,0,0,0,0,0,0.611989305817931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0.889811221596536,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2249819094128,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0.397832444232549,0,2.62216589314576,0,0,0,0,0,0.781078098613847,0,0,0,0,0,0.175871244359621,0.127762427639595,0,0,0,0,0,0,0.171488009437418,0,0.0657727735628491,0.118193840883968,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0.6828739083758,0.691259661814092,0,0,0,0,0,0,0.955538938977433,0,0.098150233615243,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48798007266701,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0.332660356546013,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:170089405..170089420,- | |||
}} |
Revision as of 19:26, 13 September 2013
Short description: | p@chr6:170089405..170089420, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:170089405..170089420, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 8.15e-19 | 11 |
osteoprogenitor cell | 8.15e-19 | 11 |
mesenchyme condensation cell | 8.15e-19 | 11 |
pneumocyte | 8.31e-09 | 3 |
fibrocyte | 1.30e-08 | 3 |
tendon cell | 1.30e-08 | 3 |
intestinal epithelial cell | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.48e-12 | 2 |
alveolar duct | 1.48e-12 | 2 |
bronchiole | 1.48e-12 | 2 |
pulmonary alveolus epithelium | 8.31e-09 | 3 |
alveolus | 8.31e-09 | 3 |
pulmonary lobule | 8.31e-09 | 3 |
lobule | 8.31e-09 | 3 |
alveolus of lung | 8.31e-09 | 3 |
alveolar system | 8.31e-09 | 3 |
pulmonary acinus | 8.31e-09 | 3 |
alveolar sac | 8.31e-09 | 3 |
alveolar wall | 8.31e-09 | 3 |
dense regular connective tissue | 1.30e-08 | 3 |
tendon | 1.30e-08 | 3 |
regular connective tissue | 1.30e-08 | 3 |
intestinal mucosa | 9.63e-07 | 4 |
wall of intestine | 9.63e-07 | 4 |
gastrointestinal system mucosa | 9.63e-07 | 4 |
gastrointestinal system epithelium | 9.63e-07 | 4 |
intestinal epithelium | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.48e-12 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.