FFCP PHASE1:Mm9::chr1:179726805..179726808,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11566|HGNC=|MCL_coexpression_id=60|UniProt=P46664|association_with_transcript=-163bp_to_ENSMUST00000016105_5end|description=CAGE_peak_9_at_Adss_5end|id=chr1:179726805..179726808,-|ontology_enrichment_celltype=CL:0000117!8.00e-13!23;CL:0000337!8.00e-13!23;CL:0000540!1.34e-07!33;CL:0000047!1.34e-07!33;CL:0000031!1.34e-07!33;CL:0000404!1.34e-07!33|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!5.20e-12!71;UBERON:0003075!5.20e-12!71;UBERON:0007284!5.20e-12!71;UBERON:0002020!1.71e-11!34;UBERON:0001049!2.16e-11!52;UBERON:0005068!2.16e-11!52;UBERON:0006241!2.16e-11!52;UBERON:0007135!2.16e-11!52;UBERON:0000033!1.51e-09!63;UBERON:0003056!1.88e-09!49;UBERON:0001017!4.49e-09!73;UBERON:0005743!4.49e-09!73;UBERON:0000073!1.64e-08!75;UBERON:0001016!1.64e-08!75;UBERON:0002616!1.78e-08!49;UBERON:0004121!2.84e-08!102;UBERON:0000924!2.84e-08!102;UBERON:0006601!2.84e-08!102;UBERON:0002791!3.93e-08!29;UBERON:0003528!3.93e-08!29;UBERON:0001893!3.93e-08!29;UBERON:0000955!3.99e-08!50;UBERON:0006238!3.99e-08!50;UBERON:0003080!2.43e-07!40;UBERON:0007811!3.26e-07!86;UBERON:0002780!8.06e-07!39;UBERON:0001890!8.06e-07!39;UBERON:0006240!8.06e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0003528,8.73e-12,29;UBERON:0002791,8.73e-12,29;UBERON:0001893,8.73e-12,29;UBERON:0002020,5.46e-10,34;UBERON:0001851,8.81e-09,1;UBERON:0005889,8.81e-09,1;UBERON:0002780,1.19e-08,39;UBERON:0001890,1.19e-08,39;UBERON:0006240,1.19e-08,39;UBERON:0000956,1.26e-08,21;UBERON:0001869,1.26e-08,21;UBERON:0000203,1.26e-08,21;UBERON:0003080,2.02e-08,40;UBERON:0002616,2.93e-07,46;UBERON:0000955,4.29e-07,47;UBERON:0006238,4.29e-07,47;UBERON:0003056,8.77e-07,49|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0,0,0.171217968225505,0.0797721589953364,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,1.41621522601718,0,0.633831403506179,0,0,0,0,0,0,0,0.933206510776299,1.08004750665353,0.630974884054146,0.856952953211411,0.220868540951614,0.979926393719632,0.670918297127655,0,0,0.383062014255563,0.46081959976873,0.527545150920775,0.457438218012048,0.52091337055676,1.11673199600552,0,0.45839474333043,0.589257170947335,0.711858403995515,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0.304465478312141,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0.127070227073065,0.449371918214468,0,1.38219787324151,1.04294592115366,1.79000820131231,0.62336413367868,0.811206315338788,0,0,0,0,0.390361328888111,0.229902104433473,0.180062129805349,0,0.0680364991513279,0.12811372028485,0.468508622798644,0.517406741478031,0,0.378212160335639,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0,0,0.0810688095458557,0,0,0,1.26173969138476,2.6755199218614,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0.0701358198903186,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.37898282354097,0.162964976442026,0,0,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0.54390568381871,0,0,0.642202359951168,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0.23467170806371,0,0,0,0,0.120625849856312,0,0,0,0.556275906031529,0,0,0.185194527369712,0,0,0,0.339956859987711,0,0,0,0.158167996790568,0,0,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,3.94585057078933,0.299033092087958,0,0,0.387479470433193,0.168956125490778,0,0.13020438484395,0.104859344425711,1.93267296660805,2.30424005006292,0,0,0,0,0,0,0,0,0,0.304827226619999,0.100826185136841,0.0974578807397524,0.0962118416403295,0.233753804363138,0,0.443971906748129,0.0897138566094757,0,0,0,0.183151624267265,0,0,0,0,0.572895513439397,0.68741272937475,0,0,1.35004500046361,0,0,0.51776031175182,0,0.399024873401031,0,0.243106717068294,0.419226325255965,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0.377252682772152,0.280924522409647,0,0.34461281373368,0,0,0.38581844092741,0,0,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0.135804113845862,0,0.355905054372522,0.197008964751127,0,0.309873682371932,0.192906610981141,0,0,0.214871054048298,0,0,0|short_description=p9@Adss}} | ||
|EntrezGene=11566 | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|UniProt=P46664 | |||
|association_with_transcript=-163bp_to_ENSMUST00000016105_5end | |||
|description=CAGE_peak_9_at_Adss_5end | |||
|id=chr1:179726805..179726808,- | |||
|ontology_enrichment_celltype=CL:0000117!8.00e-13!23;CL:0000337!8.00e-13!23;CL:0000540!1.34e-07!33;CL:0000047!1.34e-07!33;CL:0000031!1.34e-07!33;CL:0000404!1.34e-07!33 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!5.20e-12!71;UBERON:0003075!5.20e-12!71;UBERON:0007284!5.20e-12!71;UBERON:0002020!1.71e-11!34;UBERON:0001049!2.16e-11!52;UBERON:0005068!2.16e-11!52;UBERON:0006241!2.16e-11!52;UBERON:0007135!2.16e-11!52;UBERON:0000033!1.51e-09!63;UBERON:0003056!1.88e-09!49;UBERON:0001017!4.49e-09!73;UBERON:0005743!4.49e-09!73;UBERON:0000073!1.64e-08!75;UBERON:0001016!1.64e-08!75;UBERON:0002616!1.78e-08!49;UBERON:0004121!2.84e-08!102;UBERON:0000924!2.84e-08!102;UBERON:0006601!2.84e-08!102;UBERON:0002791!3.93e-08!29;UBERON:0003528!3.93e-08!29;UBERON:0001893!3.93e-08!29;UBERON:0000955!3.99e-08!50;UBERON:0006238!3.99e-08!50;UBERON:0003080!2.43e-07!40;UBERON:0007811!3.26e-07!86;UBERON:0002780!8.06e-07!39;UBERON:0001890!8.06e-07!39;UBERON:0006240!8.06e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,8.73e-12,29;UBERON:0002791,8.73e-12,29;UBERON:0001893,8.73e-12,29;UBERON:0002020,5.46e-10,34;UBERON:0001851,8.81e-09,1;UBERON:0005889,8.81e-09,1;UBERON:0002780,1.19e-08,39;UBERON:0001890,1.19e-08,39;UBERON:0006240,1.19e-08,39;UBERON:0000956,1.26e-08,21;UBERON:0001869,1.26e-08,21;UBERON:0000203,1.26e-08,21;UBERON:0003080,2.02e-08,40;UBERON:0002616,2.93e-07,46;UBERON:0000955,4.29e-07,47;UBERON:0006238,4.29e-07,47;UBERON:0003056,8.77e-07,49 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0,0,0.171217968225505,0.0797721589953364,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,1.41621522601718,0,0.633831403506179,0,0,0,0,0,0,0,0.933206510776299,1.08004750665353,0.630974884054146,0.856952953211411,0.220868540951614,0.979926393719632,0.670918297127655,0,0,0.383062014255563,0.46081959976873,0.527545150920775,0.457438218012048,0.52091337055676,1.11673199600552,0,0.45839474333043,0.589257170947335,0.711858403995515,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0.304465478312141,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0.127070227073065,0.449371918214468,0,1.38219787324151,1.04294592115366,1.79000820131231,0.62336413367868,0.811206315338788,0,0,0,0,0.390361328888111,0.229902104433473,0.180062129805349,0,0.0680364991513279,0.12811372028485,0.468508622798644,0.517406741478031,0,0.378212160335639,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0,0,0,0,0.0810688095458557,0,0,0,1.26173969138476,2.6755199218614,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0.0701358198903186,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.37898282354097,0.162964976442026,0,0,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0.54390568381871,0,0,0.642202359951168,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0.23467170806371,0,0,0,0,0.120625849856312,0,0,0,0.556275906031529,0,0,0.185194527369712,0,0,0,0.339956859987711,0,0,0,0.158167996790568,0,0,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,3.94585057078933,0.299033092087958,0,0,0.387479470433193,0.168956125490778,0,0.13020438484395,0.104859344425711,1.93267296660805,2.30424005006292,0,0,0,0,0,0,0,0,0,0.304827226619999,0.100826185136841,0.0974578807397524,0.0962118416403295,0.233753804363138,0,0.443971906748129,0.0897138566094757,0,0,0,0.183151624267265,0,0,0,0,0.572895513439397,0.68741272937475,0,0,1.35004500046361,0,0,0.51776031175182,0,0.399024873401031,0,0.243106717068294,0.419226325255965,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0.377252682772152,0.280924522409647,0,0.34461281373368,0,0,0.38581844092741,0,0,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0.135804113845862,0,0.355905054372522,0.197008964751127,0,0.309873682371932,0.192906610981141,0,0,0.214871054048298,0,0,0 | |||
|short_description=p9@Adss | |||
}} |
Revision as of 19:52, 13 September 2013
Short description: | p9@Adss |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Adss_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | -163bp_to_ENSMUST00000016105_5end |
EntrezGene: | Adss |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brain grey matter | 8.73e-12 | 29 |
regional part of telencephalon | 8.73e-12 | 29 |
telencephalon | 8.73e-12 | 29 |
gray matter | 5.46e-10 | 34 |
cortex | 8.81e-09 | 1 |
zygote cortex | 8.81e-09 | 1 |
regional part of forebrain | 1.19e-08 | 39 |
forebrain | 1.19e-08 | 39 |
future forebrain | 1.19e-08 | 39 |
cerebral cortex | 1.26e-08 | 21 |
cerebral hemisphere | 1.26e-08 | 21 |
pallium | 1.26e-08 | 21 |
anterior neural tube | 2.02e-08 | 40 |
regional part of brain | 2.93e-07 | 46 |
brain | 4.29e-07 | 47 |
future brain | 4.29e-07 | 47 |
pre-chordal neural plate | 8.77e-07 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.