FFCP PHASE1:Hg19::chr6:33589091..33589129,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3710 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6182 | |||
|TSSclassifier=S | |||
|UniProt=A6H8K3,Q14573,Q59ES2 | |||
|association_with_transcript=-26bp_to_NM_002224_5end | |||
|description=CAGE_peak_1_at_ITPR3_5end | |||
|id=chr6:33589091..33589129,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.04e-41!254;CL:0000220!3.19e-14!246;CL:0002321!6.55e-14!248;CL:0000076!2.84e-13!62;CL:0000063!6.36e-13!578;CL:0002076!2.97e-11!43;CL:0000223!1.49e-10!59;CL:0000548!1.75e-09!679;CL:0000004!1.75e-09!679;CL:0000255!1.75e-09!679;CL:0000213!4.35e-09!57;CL:0000215!4.35e-09!57;CL:0000012!6.88e-09!682;CL:0002078!1.49e-08!44;CL:1000497!2.36e-08!18;CL:0002518!2.36e-08!18;CL:1000449!1.22e-07!16;CL:1000507!6.77e-07!12;CL:1000494!6.77e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002076;5.58e-09;42!CL:1000497;2.48e-08;17!CL:0002518;2.48e-08;17!CL:1000449;1.27e-07;15!CL:0000071;9.52e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.72e-41,253;CL:0002321,1.57e-14,250;CL:0000076,5.11e-13,63;CL:0002076,1.37e-11,42;CL:0000223,6.90e-11,58;CL:0000213,2.07e-09,58;CL:0000215,2.07e-09,58;CL:0002078,6.88e-09,45;CL:1000497,2.61e-08,17;CL:0002518,2.61e-08,17;CL:1000449,1.35e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002546;9.52e-07;18 | |||
|ontology_enrichment_disease=DOID:305!5.26e-11!106;DOID:0050687!1.79e-08!143;DOID:193!1.54e-07!29;DOID:120!2.84e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:193;1.50e-07;29!DOID:120;2.80e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.01e-11,106;DOID:0050687,1.76e-08,143;DOID:193,1.52e-07,29;DOID:120,2.80e-07,27 | |||
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| |||
|short_description=p1@ITPR3 | |||
}} |
Revision as of 20:34, 13 September 2013
Short description: | p1@ITPR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ITPR3_5end |
Coexpression cluster: | NA |
Association with transcript: | -26bp_to_NM_002224_5end |
EntrezGene: | ITPR3 |
HGNC: | 6182 |
UniProt: | A6H8K3Q14573Q59ES2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.72e-41 | 253 |
embryonic cell | 1.57e-14 | 250 |
squamous epithelial cell | 5.11e-13 | 63 |
endo-epithelial cell | 1.37e-11 | 42 |
endodermal cell | 6.90e-11 | 58 |
lining cell | 2.07e-09 | 58 |
barrier cell | 2.07e-09 | 58 |
meso-epithelial cell | 6.88e-09 | 45 |
kidney cell | 2.61e-08 | 17 |
kidney epithelial cell | 2.61e-08 | 17 |
epithelial cell of nephron | 1.35e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.07e-10 | 160 |
endoderm | 1.07e-10 | 160 |
presumptive endoderm | 1.07e-10 | 160 |
respiratory system | 1.10e-09 | 74 |
trunk region element | 3.69e-09 | 101 |
anatomical cavity | 6.79e-08 | 61 |
digestive system | 8.39e-08 | 145 |
digestive tract | 8.39e-08 | 145 |
primitive gut | 8.39e-08 | 145 |
nephron epithelium | 1.35e-07 | 15 |
renal tubule | 1.35e-07 | 15 |
nephron tubule | 1.35e-07 | 15 |
nephron | 1.35e-07 | 15 |
uriniferous tubule | 1.35e-07 | 15 |
nephrogenic mesenchyme | 1.35e-07 | 15 |
excretory tube | 1.91e-07 | 16 |
kidney epithelium | 1.91e-07 | 16 |
respiratory tract | 3.96e-07 | 54 |
squamous epithelium | 9.34e-07 | 25 |
kidney | 9.62e-07 | 26 |
kidney mesenchyme | 9.62e-07 | 26 |
upper urinary tract | 9.62e-07 | 26 |
kidney rudiment | 9.62e-07 | 26 |
kidney field | 9.62e-07 | 26 |
primordium | 9.82e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.01e-11 | 106 |
cell type cancer | 1.76e-08 | 143 |
reproductive organ cancer | 1.52e-07 | 29 |
female reproductive organ cancer | 2.80e-07 | 27 |
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