FFCP PHASE1:Mm9::chr1:72895689..72895698,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=148|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:72895689..72895698,-|id=chr1:72895689..72895698,-|ontology_enrichment_celltype=CL:0002453!1.29e-15!8;CL:0000128!1.92e-12!6;CL:0000126!1.92e-12!6;CL:0000127!1.92e-12!6;CL:0000333!4.02e-12!10;CL:0000095!4.02e-12!10;CL:0000243!4.02e-12!10;CL:0000123!4.02e-12!10;CL:0000125!4.02e-12!10;CL:0000030!4.02e-12!10;CL:0000339!4.02e-12!10|ontology_enrichment_celltype_v019_2=CL:0000128,1.33e-60,6;CL:0000126,1.33e-60,6;CL:0000127,1.33e-60,6;CL:0002453,1.19e-45,8;CL:0000333,1.13e-36,10;CL:0000095,1.13e-36,10;CL:0000243,1.13e-36,10;CL:0000123,1.13e-36,10;CL:0000125,1.13e-36,10;CL:0000030,1.13e-36,10;CL:0000339,1.13e-36,10;CL:0002605,1.73e-30,2;CL:0002604,1.73e-30,2;CL:0002603,6.69e-30,2;CL:0002319,6.37e-09,43;CL:0000221,9.96e-09,44;CL:0000133,9.96e-09,44;CL:0000219,3.56e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.58e-15,4;UBERON:0002680,1.58e-15,4;UBERON:0001895,1.58e-15,4;UBERON:0010092,1.58e-15,4;UBERON:0006215,1.58e-15,4;UBERON:0004733,1.07e-10,6;UBERON:0004732,1.07e-10,6;UBERON:0002028,1.07e-10,6;UBERON:0007277,1.07e-10,6;UBERON:0001954,1.78e-09,7;UBERON:0003022,1.78e-09,7;UBERON:0002421,1.78e-09,7;UBERON:0000349,1.78e-09,7;UBERON:0002600,1.78e-09,7|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,2.8343270329458,5.27246838562732,7.97162586204562,0.419959264876088,1.43752564364972,0,0,0,0,0,0,0,0,0,0.677689064138264,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0.210324961351382,0.285650984403804,0,0,0,0,0,0,0,0,0.182975287204819,0,0,0,0,0,0.284743361598206,0,0,0,0,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0,0,0,0.130120442962704,0.229902104433473,0,0,0.0680364991513279,0.12811372028485,0.187403449119458,0,0,0,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.324270453550071,0.274561413188081,0,1.48856379067401,0.624075346229121,0.252578877947112,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0.356737635204141,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0.258319646955462,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.135804113845862,0.561142271657738,0,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p@chr1:72895689..72895698,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=148 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:72895689..72895698,- | |||
|id=chr1:72895689..72895698,- | |||
|ontology_enrichment_celltype=CL:0002453!1.29e-15!8;CL:0000128!1.92e-12!6;CL:0000126!1.92e-12!6;CL:0000127!1.92e-12!6;CL:0000333!4.02e-12!10;CL:0000095!4.02e-12!10;CL:0000243!4.02e-12!10;CL:0000123!4.02e-12!10;CL:0000125!4.02e-12!10;CL:0000030!4.02e-12!10;CL:0000339!4.02e-12!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,1.33e-60,6;CL:0000126,1.33e-60,6;CL:0000127,1.33e-60,6;CL:0002453,1.19e-45,8;CL:0000333,1.13e-36,10;CL:0000095,1.13e-36,10;CL:0000243,1.13e-36,10;CL:0000123,1.13e-36,10;CL:0000125,1.13e-36,10;CL:0000030,1.13e-36,10;CL:0000339,1.13e-36,10;CL:0002605,1.73e-30,2;CL:0002604,1.73e-30,2;CL:0002603,6.69e-30,2;CL:0002319,6.37e-09,43;CL:0000221,9.96e-09,44;CL:0000133,9.96e-09,44;CL:0000219,3.56e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.58e-15,4;UBERON:0002680,1.58e-15,4;UBERON:0001895,1.58e-15,4;UBERON:0010092,1.58e-15,4;UBERON:0006215,1.58e-15,4;UBERON:0004733,1.07e-10,6;UBERON:0004732,1.07e-10,6;UBERON:0002028,1.07e-10,6;UBERON:0007277,1.07e-10,6;UBERON:0001954,1.78e-09,7;UBERON:0003022,1.78e-09,7;UBERON:0002421,1.78e-09,7;UBERON:0000349,1.78e-09,7;UBERON:0002600,1.78e-09,7 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,2.8343270329458,5.27246838562732,7.97162586204562,0.419959264876088,1.43752564364972,0,0,0,0,0,0,0,0,0,0.677689064138264,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0.210324961351382,0.285650984403804,0,0,0,0,0,0,0,0,0.182975287204819,0,0,0,0,0,0.284743361598206,0,0,0,0,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0,0,0,0.130120442962704,0.229902104433473,0,0,0.0680364991513279,0.12811372028485,0.187403449119458,0,0,0,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.324270453550071,0.274561413188081,0,1.48856379067401,0.624075346229121,0.252578877947112,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0.356737635204141,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0,0,0.258319646955462,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.135804113845862,0.561142271657738,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr1:72895689..72895698,- | |||
}} |
Revision as of 20:52, 13 September 2013
Short description: | p@chr1:72895689..72895698, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:72895689..72895698, - |
Coexpression cluster: | MCL_coexpression_mm9:148 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 1.33e-60 | 6 |
macroglial cell | 1.33e-60 | 6 |
astrocyte | 1.33e-60 | 6 |
oligodendrocyte precursor cell | 1.19e-45 | 8 |
migratory neural crest cell | 1.13e-36 | 10 |
neuron associated cell | 1.13e-36 | 10 |
glial cell (sensu Vertebrata) | 1.13e-36 | 10 |
neuron associated cell (sensu Vertebrata) | 1.13e-36 | 10 |
glial cell | 1.13e-36 | 10 |
glioblast | 1.13e-36 | 10 |
glioblast (sensu Vertebrata) | 1.13e-36 | 10 |
astrocyte of the cerebral cortex | 1.73e-30 | 2 |
astrocyte of the hippocampus | 1.73e-30 | 2 |
astrocyte of the cerebellum | 6.69e-30 | 2 |
neural cell | 6.37e-09 | 43 |
ectodermal cell | 9.96e-09 | 44 |
neurectodermal cell | 9.96e-09 | 44 |
motile cell | 3.56e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.58e-15 | 4 |
regional part of metencephalon | 1.58e-15 | 4 |
metencephalon | 1.58e-15 | 4 |
future metencephalon | 1.58e-15 | 4 |
rhombic lip | 1.58e-15 | 4 |
segmental subdivision of hindbrain | 1.07e-10 | 6 |
segmental subdivision of nervous system | 1.07e-10 | 6 |
hindbrain | 1.07e-10 | 6 |
presumptive hindbrain | 1.07e-10 | 6 |
Ammon's horn | 1.78e-09 | 7 |
lobe parts of cerebral cortex | 1.78e-09 | 7 |
hippocampal formation | 1.78e-09 | 7 |
limbic system | 1.78e-09 | 7 |
limbic lobe | 1.78e-09 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.