FFCP PHASE1:Mm9::chr1:99992151..99992169,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18484|HGNC=|UniProt=P97467|association_with_transcript=28bp_to_ENSMUST00000058762_5end|description=CAGE_peak_7_at_Pam_5end|id=chr1:99992151..99992169,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!8.81e-13!23;UBERON:0001009!8.81e-13!23;UBERON:0007100!1.52e-10!18;UBERON:0000948!1.52e-10!18;UBERON:0005498!1.52e-10!18;UBERON:0004140!1.52e-10!18;UBERON:0009881!1.52e-10!18;UBERON:0004141!1.52e-10!18;UBERON:0003084!1.52e-10!18;UBERON:0007005!1.52e-10!18;UBERON:0004139!1.52e-10!18;UBERON:0004291!1.52e-10!18;UBERON:0004111!3.43e-08!122;UBERON:0000025!1.21e-07!114;UBERON:0004872!7.58e-07!33|ontology_enrichment_uberon_v019_2=UBERON:0004535,8.44e-13,23;UBERON:0001009,8.44e-13,23;UBERON:0007100,1.47e-10,18;UBERON:0000948,1.47e-10,18;UBERON:0005498,1.47e-10,18;UBERON:0004140,1.47e-10,18;UBERON:0009881,1.47e-10,18;UBERON:0004141,1.47e-10,18;UBERON:0003084,1.47e-10,18;UBERON:0007005,1.47e-10,18;UBERON:0004139,1.47e-10,18;UBERON:0004291,1.47e-10,18;UBERON:0004111,3.12e-08,122;UBERON:0000025,1.10e-07,114;UBERON:0010314,1.62e-07,92;UBERON:0004872,7.86e-07,33|phase1_expression=22.4208385946712,2.09385244583617,2.27499619694768,1.81478526784098,2.00358291978539,1.00727563147134,0.700837921786577,0,0.281577444303333,0.234064526321993,0.34243593645101,0.159544317990673,0.684802919724823,0.34968160967599,0.666219523631325,0.202475267389826,0,0.157731082679119,0.137114433605739,0,7.14363637268986,0.595745707205312,0.261199789138935,0.95995453676044,1.14704640533585,0.57423196411502,3.01533397311352,0.430942465371778,1.52018735565099,2.52030129759931,0.886922042621219,0,0,0,0.577703239502549,0.332469290716985,0.612508068787107,1.67412652294763,3.906676722619,2.61761871986899,1.76469446409304,3.41522742479223,4.36959317728038,44.1897831094276,52.5132503717085,31.3864946196475,1.56478268869608,11.3373081317832,32.2938688619674,29.5533446592911,7.27929392451885,7.18762821824858,0,0,0,5.40244815675489,4.58453503902011,12.8918023069361,3.84401275633236,1.5869729378161,5.07065122804943,6.09920157724438,2.66788438833342,4.94944844504769,1.97773272513395,2.1314403448383,4.19440154725767,3.45796474789399,8.08778976006126,8.77538599155989,8.2026734927039,1.42825492201902,2.87129103237098,5.63457676388789,4.98396449294829,5.51531271966013,5.50579404996943,7.2781782708557,8.29475279583715,2.76961204233407,2.92760459527711,2.6045668527838,5.02529398202486,5.6276261003168,9.0150966188318,2.65165726926301,1.99320353118744,3.72798891650601,3.3319525066601,5.06329452715463,4.92769630792852,6.88339101585109,0,0,0,0,3.7919993435573,15.6795896771813,9.87186817490901,8.12681021373782,2.25349471642689,29.5150898052931,10.1922095882658,0,3.030874574157,3.54703811665138,3.53867111510348,2.05530983494308,4.91981978929626,10.0940654564081,2.77576522825817,4.26251669636998,5.5347719341454,4.06951129492081,6.34979018532806,8.16832843642891,3.70792451601561,8.6759614151947,5.30766331169925,7.117741397686,3.97514733228708,6.78825354389311,1.86391761218122,0.878342391034642,0.83778682725382,3.0654846625031,1.67741174308288,0,1.27070227073065,11.2342979553617,3.20250421973039,4.27224797183739,6.08385120672968,7.16003280524926,6.02585329222724,5.51620294430376,10.2857757488819,5.59831367745419,1.51633655060205,5.89237196482127,1.82168620147785,4.13823787980251,4.68161537493908,4.37043971723574,4.83059143974428,4.35586648968489,4.40398105430725,3.10444044886819,2.15567992932842,2.26927296201383,4.39877810409872,5.2606975782618,7.78532297831674,6.61679116392116,6.99659263787008,7.16523360546575,0.702213187313235,1.02939162845886,1.98914449576915,22.1624576612987,17.8239805585633,23.4080679899319,26.5154103855435,24.3987647366781,33.0131621578989,28.8342091490506,34.3389953791513,33.745183944112,24.6839774870221,9.85004784474571,15.8084178614419,15.3509986796599,15.1489579550825,17.8494536951294,3.99550902271842,4.11618449517138,1.32167513193519,2.11560453330835,4.90562976231038,8.59275685883622,5.92790322081629,5.64713868945359,6.67134131534611,9.51128130562796,4.2707615539006,9.38784041926862,6.28338022000674,8.75408476981064,5.8489226135736,7.19055526923377,5.18731319699266,2.78797782556114,2.0863469104839,2.74196430263349,3.38123207019241,4.2766778847516,3.68509725618489,4.62896411276103,8.09427675190493,6.7900668070617,6.75094529717912,7.65062416315163,1.48226313543574,2.33583148002532,2.55526693647164,2.02375901146368,2.02860121388503,1.92941727801933,2.29163266603278,2.01387296215567,1.13494658742525,0.549122826376163,4.31304619582064,5.58211421502755,2.49630138491648,2.27320990152401,2.33216637578486,1.4473305640901,11.6394509804961,8.14813070613084,4.56301934037672,4.75286240170527,5.86725620721255,6.70025029767263,7.85544014923845,9.95181604074774,13.7142575372386,14.8381342064679,16.5832959403787,9.5040722535128,12.2606337124786,12.2951699794285,6.03165135757089,1.63171705145613,0.491764273019036,4.6909246871804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| ||
|EntrezGene=18484 | |||
|HGNC= | |||
|UniProt=P97467 | |||
|association_with_transcript=28bp_to_ENSMUST00000058762_5end | |||
|description=CAGE_peak_7_at_Pam_5end | |||
|id=chr1:99992151..99992169,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!8.81e-13!23;UBERON:0001009!8.81e-13!23;UBERON:0007100!1.52e-10!18;UBERON:0000948!1.52e-10!18;UBERON:0005498!1.52e-10!18;UBERON:0004140!1.52e-10!18;UBERON:0009881!1.52e-10!18;UBERON:0004141!1.52e-10!18;UBERON:0003084!1.52e-10!18;UBERON:0007005!1.52e-10!18;UBERON:0004139!1.52e-10!18;UBERON:0004291!1.52e-10!18;UBERON:0004111!3.43e-08!122;UBERON:0000025!1.21e-07!114;UBERON:0004872!7.58e-07!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,8.44e-13,23;UBERON:0001009,8.44e-13,23;UBERON:0007100,1.47e-10,18;UBERON:0000948,1.47e-10,18;UBERON:0005498,1.47e-10,18;UBERON:0004140,1.47e-10,18;UBERON:0009881,1.47e-10,18;UBERON:0004141,1.47e-10,18;UBERON:0003084,1.47e-10,18;UBERON:0007005,1.47e-10,18;UBERON:0004139,1.47e-10,18;UBERON:0004291,1.47e-10,18;UBERON:0004111,3.12e-08,122;UBERON:0000025,1.10e-07,114;UBERON:0010314,1.62e-07,92;UBERON:0004872,7.86e-07,33 | |||
|phase1_expression=22.4208385946712,2.09385244583617,2.27499619694768,1.81478526784098,2.00358291978539,1.00727563147134,0.700837921786577,0,0.281577444303333,0.234064526321993,0.34243593645101,0.159544317990673,0.684802919724823,0.34968160967599,0.666219523631325,0.202475267389826,0,0.157731082679119,0.137114433605739,0,7.14363637268986,0.595745707205312,0.261199789138935,0.95995453676044,1.14704640533585,0.57423196411502,3.01533397311352,0.430942465371778,1.52018735565099,2.52030129759931,0.886922042621219,0,0,0,0.577703239502549,0.332469290716985,0.612508068787107,1.67412652294763,3.906676722619,2.61761871986899,1.76469446409304,3.41522742479223,4.36959317728038,44.1897831094276,52.5132503717085,31.3864946196475,1.56478268869608,11.3373081317832,32.2938688619674,29.5533446592911,7.27929392451885,7.18762821824858,0,0,0,5.40244815675489,4.58453503902011,12.8918023069361,3.84401275633236,1.5869729378161,5.07065122804943,6.09920157724438,2.66788438833342,4.94944844504769,1.97773272513395,2.1314403448383,4.19440154725767,3.45796474789399,8.08778976006126,8.77538599155989,8.2026734927039,1.42825492201902,2.87129103237098,5.63457676388789,4.98396449294829,5.51531271966013,5.50579404996943,7.2781782708557,8.29475279583715,2.76961204233407,2.92760459527711,2.6045668527838,5.02529398202486,5.6276261003168,9.0150966188318,2.65165726926301,1.99320353118744,3.72798891650601,3.3319525066601,5.06329452715463,4.92769630792852,6.88339101585109,0,0,0,0,3.7919993435573,15.6795896771813,9.87186817490901,8.12681021373782,2.25349471642689,29.5150898052931,10.1922095882658,0,3.030874574157,3.54703811665138,3.53867111510348,2.05530983494308,4.91981978929626,10.0940654564081,2.77576522825817,4.26251669636998,5.5347719341454,4.06951129492081,6.34979018532806,8.16832843642891,3.70792451601561,8.6759614151947,5.30766331169925,7.117741397686,3.97514733228708,6.78825354389311,1.86391761218122,0.878342391034642,0.83778682725382,3.0654846625031,1.67741174308288,0,1.27070227073065,11.2342979553617,3.20250421973039,4.27224797183739,6.08385120672968,7.16003280524926,6.02585329222724,5.51620294430376,10.2857757488819,5.59831367745419,1.51633655060205,5.89237196482127,1.82168620147785,4.13823787980251,4.68161537493908,4.37043971723574,4.83059143974428,4.35586648968489,4.40398105430725,3.10444044886819,2.15567992932842,2.26927296201383,4.39877810409872,5.2606975782618,7.78532297831674,6.61679116392116,6.99659263787008,7.16523360546575,0.702213187313235,1.02939162845886,1.98914449576915,22.1624576612987,17.8239805585633,23.4080679899319,26.5154103855435,24.3987647366781,33.0131621578989,28.8342091490506,34.3389953791513,33.745183944112,24.6839774870221,9.85004784474571,15.8084178614419,15.3509986796599,15.1489579550825,17.8494536951294,3.99550902271842,4.11618449517138,1.32167513193519,2.11560453330835,4.90562976231038,8.59275685883622,5.92790322081629,5.64713868945359,6.67134131534611,9.51128130562796,4.2707615539006,9.38784041926862,6.28338022000674,8.75408476981064,5.8489226135736,7.19055526923377,5.18731319699266,2.78797782556114,2.0863469104839,2.74196430263349,3.38123207019241,4.2766778847516,3.68509725618489,4.62896411276103,8.09427675190493,6.7900668070617,6.75094529717912,7.65062416315163,1.48226313543574,2.33583148002532,2.55526693647164,2.02375901146368,2.02860121388503,1.92941727801933,2.29163266603278,2.01387296215567,1.13494658742525,0.549122826376163,4.31304619582064,5.58211421502755,2.49630138491648,2.27320990152401,2.33216637578486,1.4473305640901,11.6394509804961,8.14813070613084,4.56301934037672,4.75286240170527,5.86725620721255,6.70025029767263,7.85544014923845,9.95181604074774,13.7142575372386,14.8381342064679,16.5832959403787,9.5040722535128,12.2606337124786,12.2951699794285,6.03165135757089,1.63171705145613,0.491764273019036,4.69092468718045,4.97706828962155,7.2671245687166,6.39346286969034,3.02965112645248,2.2085575359138,3.51394869866975,3.23135096599198,4.77937595905104,6.01556420022464,4.24614796183249,5.26253912177363,5.55286130031493,2.37172666767914,3.53453448063988,5.25178315270594,7.47875535402472,11.0763132360432,5.93892442701128,1.32745138339963,2.42780636154981,2.72091201268276,2.82907619633847,3.54362271456927,3.68922177532713,5.16856586336442,4.72593848320757,7.12994756769443,3.47640433729398,1.05418608574999,3.09406629744561,16.6815406819356,2.70091641046965,1.81102157295856,2.14337035031592,2.12808280370728,4.10248280484762,5.10101963866575,6.39376393140658,0.469343416127421,1.27099242518292,4.19003956304428,2.63818004706368,4.68246837418126,6.6947346670253,6.32673423216623,2.9545361954111,3.78925087618806,8.34413859047294,1.36696704638282,3.09580301944834,2.40752885580625,1.13021074202815,1.0935538217682,1.83022538565218,2.03974115992626,1.53946597556024,1.65839968565309,0.954670618015114,5.852215881251,6.91286188231286,5.94029374519907,7.73626695253534,5.45906409365444,7.68726774393478,7.10819719237889,5.75863072364865,5.18459893167171,8.69875038321696,1.69107881605257,2.54178128274764,2.15096037594227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| |||
|short_description=p7@Pam | |||
}} |
Revision as of 21:24, 13 September 2013
Short description: | p7@Pam |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Pam_5end |
Coexpression cluster: | NA |
Association with transcript: | 28bp_to_ENSMUST00000058762_5end |
EntrezGene: | Pam |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 8.44e-13 | 23 |
circulatory system | 8.44e-13 | 23 |
primary circulatory organ | 1.47e-10 | 18 |
heart | 1.47e-10 | 18 |
primitive heart tube | 1.47e-10 | 18 |
primary heart field | 1.47e-10 | 18 |
anterior lateral plate mesoderm | 1.47e-10 | 18 |
heart tube | 1.47e-10 | 18 |
heart primordium | 1.47e-10 | 18 |
cardiac mesoderm | 1.47e-10 | 18 |
cardiogenic plate | 1.47e-10 | 18 |
heart rudiment | 1.47e-10 | 18 |
anatomical conduit | 3.12e-08 | 122 |
tube | 1.10e-07 | 114 |
structure with developmental contribution from neural crest | 1.62e-07 | 92 |
splanchnic layer of lateral plate mesoderm | 7.86e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.