FFCP PHASE1:Hg19::chr7:141811505..141811536,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=93432|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=|TSSclassifier=S|UniProt=C9JNC2|association_with_transcript=-12bp_to_ENST00000477922,ENST00000550469,NR_003715,uc003vwz.2_5end|coexpression_cluster_id=C2984|description=CAGE_peak_1_at_LOC93432_5end|id=chr7:141811505..141811536,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0008801;9.79e-09;1!UBERON:0006298;1.63e-08;1!UBERON:0006242;2.33e-08;1!UBERON:0001045;3.10e-08;1!UBERON:0000358;3.83e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.52e-14!115;UBERON:0004921!2.11e-09!129;UBERON:0004185!2.11e-09!129;UBERON:0001007!5.36e-08!155;UBERON:0001555!5.36e-08!155;UBERON:0007026!5.36e-08!155;UBERON:0005409!8.80e-08!35;UBERON:0001829!9.78e-07!2|ontology_enrichment_uberon_v019=UBERON:0004921;2.28e-20;33!UBERON:0001829;1.54e-15;2!UBERON:0005409;2.00e-14;22!UBERON:0003127;2.07e-14;2!UBERON:0000160;9.07e-14;17!UBERON:0002108;1.34e-13;4!UBERON:0001044;1.93e-11;6!UBERON:0003293;1.93e-11;6!UBERON:0003294;1.93e-11;6!UBERON:0010047;1.93e-11;6!UBERON:0003408;1.93e-11;6!UBERON:0000167;1.93e-11;6!UBERON:0001555;1.84e-10;54!UBERON:0001723;4.95e-10;3!UBERON:0001033;4.95e-10;3!UBERON:0001831;9.79e-09;1!UBERON:0001567;9.79e-09;1!UBERON:0001736;1.63e-08;1!UBERON:0000165;1.77e-08;28!UBERON:0001041;1.79e-08;14!UBERON:0001154;3.10e-08;1!UBERON:0001153;3.10e-08;1!UBERON:0009854;3.10e-08;1!UBERON:0002372;5.82e-08;1!UBERON:0001961;5.82e-08;1!UBERON:0001744;5.82e-08;1!UBERON:0001042;5.82e-08;1!UBERON:0001735;5.82e-08;1!UBERON:0001007;9.73e-08;81!UBERON:0001155;1.37e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.54e-15,2;UBERON:0003127,1.93e-14,2;UBERON:0000160,9.17e-14,17;UBERON:0002108,1.36e-13,4;UBERON:0005409,1.17e-12,25;UBERON:0004921,6.34e-12,118;UBERON:0001044,1.93e-11,6;UBERON:0003293,1.93e-11,6;UBERON:0003294,1.93e-11,6;UBERON:0010047,1.93e-11,6;UBERON:0000167,1.93e-11,6;UBERON:0000166,6.27e-11,22;UBERON:0001007,1.62e-10,145;UBERON:0001555,1.62e-10,145;UBERON:0007026,1.62e-10,145;UBERON:0001723,4.73e-10,3;UBERON:0001033,4.73e-10,3;UBERON:0010056,4.73e-10,3;UBERON:0004119,3.15e-09,160;UBERON:0000925,3.15e-09,160;UBERON:0006595,3.15e-09,160;UBERON:0007023,3.25e-09,114;UBERON:0001831,9.79e-09,1;UBERON:0001567,9.79e-09,1;UBERON:0008801,9.79e-09,1;UBERON:0001736,1.63e-08,1;UBERON:0006298,1.63e-08,1;UBERON:0001154,3.10e-08,1;UBERON:0001153,3.10e-08,1;UBERON:0001045,3.10e-08,1;UBERON:0000165,3.66e-08,29;UBERON:0000930,3.66e-08,29;UBERON:0002372,6.68e-08,1;UBERON:0001961,6.68e-08,1;UBERON:0001744,6.68e-08,1;UBERON:0001735,6.68e-08,1;UBERON:0001155,1.37e-07,9;UBERON:0003408,4.84e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0.329851300186716,0.199463657621632,0,0,0,0.622822248995575,0,0.521482918420201,0,0,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,1.76646882614069,10.8971841883166,0.425846237690326,0,0,0.671028323677248,0.166849141711909,1.36771666781428,0,0,0,0,0,4.49137296979728,0,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,3.59169090190492,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.1758818998749,6.72133159426988,0.296521128680622,0,0,0.067401132980677,0,0,0,0,0,0,20.5684217282729,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,9.81883775801022,0,0.144090417154106,0,0.514784993585894,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,11.5160153372256,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0,0,0,5.00442087887438,0.285465333544967,0,0,0.28984205722165,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=93432 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt=C9JNC2 | |||
|association_with_transcript=-12bp_to_ENST00000477922,ENST00000550469,NR_003715,uc003vwz.2_5end | |||
|coexpression_cluster_id=C2984 | |||
|description=CAGE_peak_1_at_LOC93432_5end | |||
|id=chr7:141811505..141811536,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008801;9.79e-09;1!UBERON:0006298;1.63e-08;1!UBERON:0006242;2.33e-08;1!UBERON:0001045;3.10e-08;1!UBERON:0000358;3.83e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.52e-14!115;UBERON:0004921!2.11e-09!129;UBERON:0004185!2.11e-09!129;UBERON:0001007!5.36e-08!155;UBERON:0001555!5.36e-08!155;UBERON:0007026!5.36e-08!155;UBERON:0005409!8.80e-08!35;UBERON:0001829!9.78e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;2.28e-20;33!UBERON:0001829;1.54e-15;2!UBERON:0005409;2.00e-14;22!UBERON:0003127;2.07e-14;2!UBERON:0000160;9.07e-14;17!UBERON:0002108;1.34e-13;4!UBERON:0001044;1.93e-11;6!UBERON:0003293;1.93e-11;6!UBERON:0003294;1.93e-11;6!UBERON:0010047;1.93e-11;6!UBERON:0003408;1.93e-11;6!UBERON:0000167;1.93e-11;6!UBERON:0001555;1.84e-10;54!UBERON:0001723;4.95e-10;3!UBERON:0001033;4.95e-10;3!UBERON:0001831;9.79e-09;1!UBERON:0001567;9.79e-09;1!UBERON:0001736;1.63e-08;1!UBERON:0000165;1.77e-08;28!UBERON:0001041;1.79e-08;14!UBERON:0001154;3.10e-08;1!UBERON:0001153;3.10e-08;1!UBERON:0009854;3.10e-08;1!UBERON:0002372;5.82e-08;1!UBERON:0001961;5.82e-08;1!UBERON:0001744;5.82e-08;1!UBERON:0001042;5.82e-08;1!UBERON:0001735;5.82e-08;1!UBERON:0001007;9.73e-08;81!UBERON:0001155;1.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.54e-15,2;UBERON:0003127,1.93e-14,2;UBERON:0000160,9.17e-14,17;UBERON:0002108,1.36e-13,4;UBERON:0005409,1.17e-12,25;UBERON:0004921,6.34e-12,118;UBERON:0001044,1.93e-11,6;UBERON:0003293,1.93e-11,6;UBERON:0003294,1.93e-11,6;UBERON:0010047,1.93e-11,6;UBERON:0000167,1.93e-11,6;UBERON:0000166,6.27e-11,22;UBERON:0001007,1.62e-10,145;UBERON:0001555,1.62e-10,145;UBERON:0007026,1.62e-10,145;UBERON:0001723,4.73e-10,3;UBERON:0001033,4.73e-10,3;UBERON:0010056,4.73e-10,3;UBERON:0004119,3.15e-09,160;UBERON:0000925,3.15e-09,160;UBERON:0006595,3.15e-09,160;UBERON:0007023,3.25e-09,114;UBERON:0001831,9.79e-09,1;UBERON:0001567,9.79e-09,1;UBERON:0008801,9.79e-09,1;UBERON:0001736,1.63e-08,1;UBERON:0006298,1.63e-08,1;UBERON:0001154,3.10e-08,1;UBERON:0001153,3.10e-08,1;UBERON:0001045,3.10e-08,1;UBERON:0000165,3.66e-08,29;UBERON:0000930,3.66e-08,29;UBERON:0002372,6.68e-08,1;UBERON:0001961,6.68e-08,1;UBERON:0001744,6.68e-08,1;UBERON:0001735,6.68e-08,1;UBERON:0001155,1.37e-07,9;UBERON:0003408,4.84e-07,10 | |||
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|short_description=p1@LOC93432 | |||
}} |
Revision as of 23:37, 13 September 2013
Short description: | p1@LOC93432 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LOC93432_5end |
Coexpression cluster: | C2984_parotid_duodenum_small_temporal_trachea_colon_tongue |
Association with transcript: | -12bp_to_ENST00000477922, ENST00000550469, NR_003715, uc003vwz.2_5end |
EntrezGene: | LOC93432 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 1.54e-15 | 2 |
open tracheal system trachea | 1.93e-14 | 2 |
intestine | 9.17e-14 | 17 |
small intestine | 1.36e-13 | 4 |
gastrointestinal system | 1.17e-12 | 25 |
subdivision of digestive tract | 6.34e-12 | 118 |
saliva-secreting gland | 1.93e-11 | 6 |
gland of oral region | 1.93e-11 | 6 |
gland of foregut | 1.93e-11 | 6 |
oral gland | 1.93e-11 | 6 |
oral cavity | 1.93e-11 | 6 |
oral opening | 6.27e-11 | 22 |
digestive system | 1.62e-10 | 145 |
digestive tract | 1.62e-10 | 145 |
primitive gut | 1.62e-10 | 145 |
tongue | 4.73e-10 | 3 |
gustatory system | 4.73e-10 | 3 |
future tongue | 4.73e-10 | 3 |
endoderm-derived structure | 3.15e-09 | 160 |
endoderm | 3.15e-09 | 160 |
presumptive endoderm | 3.15e-09 | 160 |
adult organism | 3.25e-09 | 114 |
parotid gland | 9.79e-09 | 1 |
cheek | 9.79e-09 | 1 |
parotid gland primordium | 9.79e-09 | 1 |
submandibular gland | 1.63e-08 | 1 |
submandibular gland primordium | 1.63e-08 | 1 |
vermiform appendix | 3.10e-08 | 1 |
caecum | 3.10e-08 | 1 |
midgut | 3.10e-08 | 1 |
mouth | 3.66e-08 | 29 |
stomodeum | 3.66e-08 | 29 |
tonsil | 6.68e-08 | 1 |
mucosa-associated lymphoid tissue | 6.68e-08 | 1 |
lymphoid tissue | 6.68e-08 | 1 |
tonsillar ring | 6.68e-08 | 1 |
colon | 1.37e-07 | 9 |
gland of gut | 4.84e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.