FFCP PHASE1:Mm9::chr2:30061314..30061355,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=70266|HGNC=|MCL_coexpression_id=8|UniProt=Q8BTY1|association_with_transcript=0bp_to_ENSMUST00000113663,ENSMUST00000148555_5end|description=CAGE_peak_1_at_Ccbl1_5end|id=chr2:30061314..30061355,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!3.55e-15!128;UBERON:0001555!3.55e-15!128;UBERON:0007026!3.55e-15!128;UBERON:0004921!1.56e-14!126;UBERON:0004185!1.56e-14!126;UBERON:0004119!1.95e-14!130;UBERON:0000925!1.95e-14!130;UBERON:0006595!1.95e-14!130;UBERON:0002365!6.62e-12!25;UBERON:0002330!6.62e-12!25;UBERON:0002107!1.43e-10!22;UBERON:0007499!1.43e-10!22;UBERON:0006925!1.43e-10!22;UBERON:0009497!1.43e-10!22;UBERON:0000015!1.43e-10!22;UBERON:0002423!1.43e-10!22;UBERON:0006235!1.43e-10!22;UBERON:0008835!1.43e-10!22;UBERON:0003894!1.43e-10!22;UBERON:0004161!1.43e-10!22;UBERON:0008836!1.43e-10!22;UBERON:0009854!1.20e-09!23;UBERON:0009856!1.20e-09!23;UBERON:0000077!3.76e-09!97;UBERON:0001041!1.44e-08!92;UBERON:0005177!5.31e-08!85;UBERON:0000160!9.69e-08!43;UBERON:0003104!2.07e-07!131;UBERON:0009142!2.07e-07!131;UBERON:0005409!2.55e-07!59;UBERON:0000481!2.94e-07!230;UBERON:0005911!3.30e-07!69;UBERON:0000949!5.98e-07!72;UBERON:0005172!6.53e-07!49;UBERON:0005173!6.53e-07!49;UBERON:0002417!6.53e-07!49;UBERON:0000916!6.53e-07!49;UBERON:0003929!8.76e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0002365,6.62e-12,25;UBERON:0002330,6.62e-12,25;UBERON:0001007,3.19e-11,116;UBERON:0001555,3.19e-11,116;UBERON:0007026,3.19e-11,116;UBERON:0004921,1.14e-10,114;UBERON:0004119,1.40e-10,118;UBERON:0000925,1.40e-10,118;UBERON:0006595,1.40e-10,118;UBERON:0002107,1.43e-10,22;UBERON:0007499,1.43e-10,22;UBERON:0006925,1.43e-10,22;UBERON:0009497,1.43e-10,22;UBERON:0000015,1.43e-10,22;UBERON:0002423,1.43e-10,22;UBERON:0006235,1.43e-10,22;UBERON:0008835,1.43e-10,22;UBERON:0003894,1.43e-10,22;UBERON:0004161,1.43e-10,22;UBERON:0008836,1.43e-10,22;UBERON:0005177,1.01e-09,79;UBERON:0009854,1.20e-09,23;UBERON:0009856,1.20e-09,23;UBERON:0005911,3.28e-07,69;UBERON:0002100,3.66e-07,90;UBERON:0000949,5.95e-07,72;UBERON:0005172,6.53e-07,49;UBERON:0005173,6.53e-07,49;UBERON:0002417,6.53e-07,49;UBERON:0000916,6.53e-07,49;UBERON:0003929,8.70e-07,55|phase1_expression=7.68714466103011,16.7508195666893,8.64498554840118,8.16653370528441,5.00895729946347,8.05820505177071,6.54115393667472,11.2337291394171,1.267098499365,2.34064526321993,3.25314139628459,2.39316476986009,9.0736386863539,10.4030278878607,3.99731714178795,3.03712901084739,4.89693314689703,4.73193248037357,4.38766187538364,3.39511721438424,12.3312770719051,5.16312946244604,2.35079810225042,14.8792953197868,10.3234176480227,6.31655160526522,8.61523992318149,12.0663890304098,7.22088993934221,5.29263272495855,6.20845429834853,13.9706748161119,11.0711661765223,0,15.0202842270663,11.137721239019,14.2918549383658,4.60384793810598,5.4693474116666,3.14114246384279,2.35292595212406,1.36609096991689,1.94204141212461,1.51076181570693,1.62203089951223,0.917733760808408,1.56478268869608,2.8343270329458,4.39372365468944,4.27745777963423,1.39986421625363,1.43752564364972,2.34895648480831,2.17608642603403,6.04968838456435,5.65970759279083,3.15186783932632,5.15672092277442,4.85559506063035,4.23192783417626,6.97214543856797,3.38844532069132,5.33576877666684,1.7997994345628,1.97773272513395,2.8419204597844,3.89480143673926,8.83702102239575,5.59923906465779,6.75029691658453,5.25812403378455,4.85606673486466,3.75476519617743,3.1847607795888,4.31304619582064,2.75765635983006,7.70811166995721,7.15049093277051,6.29786786350598,4.87979264601717,5.12330804173494,5.73004707612436,7.2587579740359,6.19038871034848,8.86229837105499,2.94628585473668,3.98640706237488,3.35519002485541,1.8931548333296,2.94729084416464,13.9134954576805,66.2526385275668,35.358509352803,103.083309602823,107.862885296313,71.6843019355737,31.7404389497759,1.53387290320252,1.81850203222008,1.7666978725517,12.5350643601246,1.28326477414318,2.54805239706646,0,3.68034769719064,3.04031838570118,3.0331466700887,27.4041311325744,4.40194402200192,5.19547486726887,4.68410382268567,8.22056791442781,7.14908041493781,7.68685466818375,6.70255630673517,4.39833069653864,24.2251068379686,11.2787498397531,3.5384422077995,3.39710384889559,3.5334642953663,5.33362778448744,3.72783522436244,14.9318206475889,14.2423760633149,9.45191104271788,1.91704199209472,3.59941638596045,2.28726408731516,10.1857634795279,8.23501085073528,4.52355667606312,5.21472960576829,3.3243009452943,10.5971902725376,6.16516799657479,3.7680564624617,14.4312085907708,62.927966849985,22.9381622916257,5.98554037628437,5.9774547152703,3.42118046630164,7.9873553452929,4.83059143974428,7.81493693737584,7.68354141389776,15.5222022443409,2.58681591519411,4.72765200419548,7.03804496655795,3.94552318369635,13.0682207136031,8.00979983000983,12.1411460480687,3.58261680273288,0,1.28673953557358,1.70498099637356,3.93538967817454,4.69052119962192,3.6012412292203,3.077681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| ||
|EntrezGene=70266 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|UniProt=Q8BTY1 | |||
|association_with_transcript=0bp_to_ENSMUST00000113663,ENSMUST00000148555_5end | |||
|description=CAGE_peak_1_at_Ccbl1_5end | |||
|id=chr2:30061314..30061355,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!3.55e-15!128;UBERON:0001555!3.55e-15!128;UBERON:0007026!3.55e-15!128;UBERON:0004921!1.56e-14!126;UBERON:0004185!1.56e-14!126;UBERON:0004119!1.95e-14!130;UBERON:0000925!1.95e-14!130;UBERON:0006595!1.95e-14!130;UBERON:0002365!6.62e-12!25;UBERON:0002330!6.62e-12!25;UBERON:0002107!1.43e-10!22;UBERON:0007499!1.43e-10!22;UBERON:0006925!1.43e-10!22;UBERON:0009497!1.43e-10!22;UBERON:0000015!1.43e-10!22;UBERON:0002423!1.43e-10!22;UBERON:0006235!1.43e-10!22;UBERON:0008835!1.43e-10!22;UBERON:0003894!1.43e-10!22;UBERON:0004161!1.43e-10!22;UBERON:0008836!1.43e-10!22;UBERON:0009854!1.20e-09!23;UBERON:0009856!1.20e-09!23;UBERON:0000077!3.76e-09!97;UBERON:0001041!1.44e-08!92;UBERON:0005177!5.31e-08!85;UBERON:0000160!9.69e-08!43;UBERON:0003104!2.07e-07!131;UBERON:0009142!2.07e-07!131;UBERON:0005409!2.55e-07!59;UBERON:0000481!2.94e-07!230;UBERON:0005911!3.30e-07!69;UBERON:0000949!5.98e-07!72;UBERON:0005172!6.53e-07!49;UBERON:0005173!6.53e-07!49;UBERON:0002417!6.53e-07!49;UBERON:0000916!6.53e-07!49;UBERON:0003929!8.76e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,6.62e-12,25;UBERON:0002330,6.62e-12,25;UBERON:0001007,3.19e-11,116;UBERON:0001555,3.19e-11,116;UBERON:0007026,3.19e-11,116;UBERON:0004921,1.14e-10,114;UBERON:0004119,1.40e-10,118;UBERON:0000925,1.40e-10,118;UBERON:0006595,1.40e-10,118;UBERON:0002107,1.43e-10,22;UBERON:0007499,1.43e-10,22;UBERON:0006925,1.43e-10,22;UBERON:0009497,1.43e-10,22;UBERON:0000015,1.43e-10,22;UBERON:0002423,1.43e-10,22;UBERON:0006235,1.43e-10,22;UBERON:0008835,1.43e-10,22;UBERON:0003894,1.43e-10,22;UBERON:0004161,1.43e-10,22;UBERON:0008836,1.43e-10,22;UBERON:0005177,1.01e-09,79;UBERON:0009854,1.20e-09,23;UBERON:0009856,1.20e-09,23;UBERON:0005911,3.28e-07,69;UBERON:0002100,3.66e-07,90;UBERON:0000949,5.95e-07,72;UBERON:0005172,6.53e-07,49;UBERON:0005173,6.53e-07,49;UBERON:0002417,6.53e-07,49;UBERON:0000916,6.53e-07,49;UBERON:0003929,8.70e-07,55 | |||
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| |||
|short_description=p1@Ccbl1 | |||
}} |
Revision as of 23:41, 13 September 2013
Short description: | p1@Ccbl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ccbl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 0bp_to_ENSMUST00000113663, ENSMUST00000148555_5end |
EntrezGene: | Ccbl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
exocrine gland | 6.62e-12 | 25 |
exocrine system | 6.62e-12 | 25 |
digestive system | 3.19e-11 | 116 |
digestive tract | 3.19e-11 | 116 |
primitive gut | 3.19e-11 | 116 |
subdivision of digestive tract | 1.14e-10 | 114 |
endoderm-derived structure | 1.40e-10 | 118 |
endoderm | 1.40e-10 | 118 |
presumptive endoderm | 1.40e-10 | 118 |
liver | 1.43e-10 | 22 |
epithelial sac | 1.43e-10 | 22 |
digestive gland | 1.43e-10 | 22 |
epithelium of foregut-midgut junction | 1.43e-10 | 22 |
anatomical boundary | 1.43e-10 | 22 |
hepatobiliary system | 1.43e-10 | 22 |
foregut-midgut junction | 1.43e-10 | 22 |
hepatic diverticulum | 1.43e-10 | 22 |
liver primordium | 1.43e-10 | 22 |
septum transversum | 1.43e-10 | 22 |
liver bud | 1.43e-10 | 22 |
trunk region element | 1.01e-09 | 79 |
digestive tract diverticulum | 1.20e-09 | 23 |
sac | 1.20e-09 | 23 |
endo-epithelium | 3.28e-07 | 69 |
trunk | 3.66e-07 | 90 |
endocrine system | 5.95e-07 | 72 |
abdomen element | 6.53e-07 | 49 |
abdominal segment element | 6.53e-07 | 49 |
abdominal segment of trunk | 6.53e-07 | 49 |
abdomen | 6.53e-07 | 49 |
gut epithelium | 8.70e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.